© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|3071 |
| Gene name | |
| Location | Contig_2254:73..898 |
| Strand | - |
| Gene length (bp) | 825 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-25 | 3 | 272 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 5.8E-07 | 45 | 261 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 25 | 271 | 7.0E-36 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 26 | 271 | 3.0E-34 |
| sp|P13090|ATR1_YEAST | Aminotriazole resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATR1 PE=1 SV=2 | 13 | 271 | 2.0E-25 |
| sp|Q03263|YM8M_YEAST | Uncharacterized transporter YMR279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR279C PE=1 SV=1 | 48 | 271 | 4.0E-19 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 1 | 273 | 1.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 25 | 271 | 7.0E-36 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 26 | 271 | 3.0E-34 |
| sp|P13090|ATR1_YEAST | Aminotriazole resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATR1 PE=1 SV=2 | 13 | 271 | 2.0E-25 |
| sp|Q03263|YM8M_YEAST | Uncharacterized transporter YMR279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR279C PE=1 SV=1 | 48 | 271 | 4.0E-19 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 1 | 273 | 1.0E-16 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 1 | 273 | 1.0E-16 |
| sp|Q00538|MMR_BACSU | Methylenomycin A resistance protein OS=Bacillus subtilis (strain 168) GN=mmr PE=3 SV=1 | 1 | 266 | 5.0E-15 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 29 | 270 | 1.0E-14 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 12 | 265 | 1.0E-12 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 12 | 265 | 1.0E-12 |
| sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 11 | 270 | 3.0E-12 |
| sp|P46104|LMRA_STRLN | Lincomycin resistance protein OS=Streptomyces lincolnensis GN=lmrA PE=3 SV=1 | 11 | 256 | 6.0E-12 |
| sp|P96712|BMR3_BACSU | Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168) GN=bmr3 PE=1 SV=1 | 48 | 249 | 3.0E-10 |
| sp|Q04733|CMCT_AMYLA | Cephamycin export protein CmcT OS=Amycolatopsis lactamdurans GN=cmcT PE=3 SV=1 | 5 | 246 | 4.0E-10 |
| sp|P9WJW9|Y2459_MYCTU | Uncharacterized MFS-type transporter Rv2459 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2459 PE=3 SV=1 | 11 | 201 | 5.0E-10 |
| sp|P9WJW8|Y2459_MYCTO | Uncharacterized MFS-type transporter MT2534 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2534 PE=3 SV=1 | 11 | 201 | 5.0E-10 |
| sp|P9WG90|STP_MYCTO | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=stp PE=3 SV=1 | 11 | 274 | 2.0E-09 |
| sp|P9WG91|STP_MYCTU | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=stp PE=1 SV=1 | 11 | 274 | 1.0E-08 |
| sp|P52600|EMRY_ECOLI | Probable multidrug resistance protein EmrY OS=Escherichia coli (strain K12) GN=emrY PE=2 SV=1 | 11 | 272 | 2.0E-08 |
| sp|P0A0J9|QACA_STAAU | Antiseptic resistance protein OS=Staphylococcus aureus GN=qacA PE=1 SV=1 | 14 | 249 | 6.0E-08 |
| sp|P0A0J8|QACA_STAAM | Antiseptic resistance protein OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=qacA PE=3 SV=1 | 14 | 249 | 6.0E-08 |
| sp|O35018|LMRB_BACSU | Lincomycin resistance protein LmrB OS=Bacillus subtilis (strain 168) GN=lmrB PE=3 SV=1 | 1 | 260 | 1.0E-07 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 14 | 271 | 1.0E-07 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 34 | 178 | 3.0E-07 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 14 | 271 | 4.0E-07 |
| sp|P23054|TCRB_BACSU | Tetracycline resistance protein OS=Bacillus subtilis (strain 168) GN=tetB PE=3 SV=1 | 11 | 252 | 1.0E-06 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 50 | 249 | 1.0E-06 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 50 | 249 | 1.0E-06 |
| sp|P31474|HSRA_ECOLI | Probable transport protein HsrA OS=Escherichia coli (strain K12) GN=hsrA PE=1 SV=1 | 10 | 249 | 2.0E-06 |
| sp|P07561|TCR_GEOSE | Tetracycline resistance protein OS=Geobacillus stearothermophilus GN=tet PE=3 SV=1 | 11 | 257 | 2.0E-06 |
| sp|P0A4K7|TCR_BACCE | Tetracycline resistance protein OS=Bacillus cereus GN=tet PE=3 SV=1 | 11 | 257 | 2.0E-06 |
| sp|P0A4K8|TCR_BACIU | Tetracycline resistance protein OS=Bacillus subtilis GN=tet PE=3 SV=1 | 11 | 257 | 2.0E-06 |
| sp|P0A4K6|TCR_STREE | Tetracycline resistance protein OS=Streptococcus pneumoniae GN=tet PE=3 SV=1 | 11 | 257 | 2.0E-06 |
| sp|P9WJY3|MFS55_MYCTU | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1410c PE=1 SV=1 | 48 | 248 | 3.0E-06 |
| sp|P9WJY2|MFS55_MYCTO | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1454 PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|C6DTH3|MFS55_MYCTK | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain KZN 1435 / MDR) GN=TBMG_02570 PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|A5WM93|MFS55_MYCTF | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain F11) GN=TBFG_11439 PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|A5U2B2|MFS55_MYCTA | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_1419 PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|C1AN55|MFS55_MYCBT | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_1446 PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|A1KIJ9|MFS55_MYCBP | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_1471c PE=1 SV=1 | 48 | 248 | 3.0E-06 |
| sp|Q7U042|MFS55_MYCBO | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1445c PE=3 SV=1 | 48 | 248 | 3.0E-06 |
| sp|P36890|TCR_STAHY | Tetracycline resistance protein OS=Staphylococcus hyicus GN=tet PE=3 SV=1 | 11 | 147 | 3.0E-06 |
| sp|P32369|BAIG_CLOSV | Bile acid transporter OS=Clostridium scindens (strain JCM 10418 / VPI 12708) GN=baiG PE=3 SV=2 | 6 | 265 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 53 | 75 | 22 |
| 2 | 82 | 101 | 19 |
| 3 | 116 | 138 | 22 |
| 4 | 145 | 167 | 22 |
| 5 | 182 | 200 | 18 |
| 6 | 213 | 235 | 22 |
| 7 | 250 | 272 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|3071 MMSEFFISGFNIILPHVVDSLRIAPGATTWPAGVTNLTTAALLQPCARLCDMFGARYVFFAGHAWLLAWSVATGF VQNYSLLILGRAMQGLGAAAFLPAGLALLSKTYRPGPRKNLVFAVYGAFACIGFYFGILVGALAAQLANWRWYFW IGAILEAVIAAAGLFSIPKDLADRDPDARMDWWGLGTIVPGLVLVVFAFTDGRHAPDGWNTPYIYVTLIVGVVLL AAAVFVEGWVAKQPLVPPALFKPRYMVRLVCALFCSYGVFGLFLFYASF* |
| Coding | >OphauG2|3071 ATGATGTCCGAGTTCTTCATCTCCGGCTTCAACATCATCCTTCCCCATGTTGTTGATTCCCTCCGCATCGCCCCC GGCGCCACCACTTGGCCCGCCGGCGTCACCAACCTCACCACCGCCGCCCTCCTCCAGCCCTGTGCCCGGCTGTGC GACATGTTTGGCGCCCGCTACGTCTTCTTTGCCGGCCACGCCTGGCTGCTCGCCTGGTCTGTCGCCACCGGCTTC GTCCAAAACTACTCCCTACTCATCCTCGGCCGCGCCATGCAAGGCCTCGGCGCCGCTGCCTTTCTCCCCGCCGGC TTGGCCCTGCTTAGCAAGACGTACCGCCCCGGGCCCAGGAAGAATCTCGTCTTTGCTGTGTATGGCGCCTTTGCC TGCATTGGCTTTTACTTTGGCATCTTGGTGGGCGCCCTCGCCGCCCAGCTGGCTAACTGGCGCTGGTATTTTTGG ATCGGCGCAATCCTCGAAGCTGTTATTGCTGCTGCCGGTCTCTTTTCCATTCCCAAAGACTTGGCTGACCGCGAC CCCGACGCTCGCATGGACTGGTGGGGCTTGGGCACCATTGTCCCGGGCCTTGTTCTTGTCGTCTTTGCCTTTACC GATGGCCGCCATGCCCCGGACGGCTGGAACACGCCCTATATTTACGTCACCCTCATTGTTGGCGTCGTCTTGTTG GCCGCTGCCGTCTTTGTCGAGGGCTGGGTTGCCAAACAGCCGCTTGTCCCGCCCGCCCTGTTTAAGCCGCGCTAC ATGGTGCGCCTGGTGTGCGCTCTGTTTTGCTCCTATGGCGTCTTTGGCCTCTTTTTGTTTTATGCCAGCTTCTAG |
| Transcript | >OphauG2|3071 ATGATGTCCGAGTTCTTCATCTCCGGCTTCAACATCATCCTTCCCCATGTTGTTGATTCCCTCCGCATCGCCCCC GGCGCCACCACTTGGCCCGCCGGCGTCACCAACCTCACCACCGCCGCCCTCCTCCAGCCCTGTGCCCGGCTGTGC GACATGTTTGGCGCCCGCTACGTCTTCTTTGCCGGCCACGCCTGGCTGCTCGCCTGGTCTGTCGCCACCGGCTTC GTCCAAAACTACTCCCTACTCATCCTCGGCCGCGCCATGCAAGGCCTCGGCGCCGCTGCCTTTCTCCCCGCCGGC TTGGCCCTGCTTAGCAAGACGTACCGCCCCGGGCCCAGGAAGAATCTCGTCTTTGCTGTGTATGGCGCCTTTGCC TGCATTGGCTTTTACTTTGGCATCTTGGTGGGCGCCCTCGCCGCCCAGCTGGCTAACTGGCGCTGGTATTTTTGG ATCGGCGCAATCCTCGAAGCTGTTATTGCTGCTGCCGGTCTCTTTTCCATTCCCAAAGACTTGGCTGACCGCGAC CCCGACGCTCGCATGGACTGGTGGGGCTTGGGCACCATTGTCCCGGGCCTTGTTCTTGTCGTCTTTGCCTTTACC GATGGCCGCCATGCCCCGGACGGCTGGAACACGCCCTATATTTACGTCACCCTCATTGTTGGCGTCGTCTTGTTG GCCGCTGCCGTCTTTGTCGAGGGCTGGGTTGCCAAACAGCCGCTTGTCCCGCCCGCCCTGTTTAAGCCGCGCTAC ATGGTGCGCCTGGTGTGCGCTCTGTTTTGCTCCTATGGCGTCTTTGGCCTCTTTTTGTTTTATGCCAGCTTCTAG |
| Gene | >OphauG2|3071 ATGATGTCCGAGTTCTTCATCTCCGGCTTCAACATCATCCTTCCCCATGTTGTTGATTCCCTCCGCATCGCCCCC GGCGCCACCACTTGGCCCGCCGGCGTCACCAACCTCACCACCGCCGCCCTCCTCCAGCCCTGTGCCCGGCTGTGC GACATGTTTGGCGCCCGCTACGTCTTCTTTGCCGGCCACGCCTGGCTGCTCGCCTGGTCTGTCGCCACCGGCTTC GTCCAAAACTACTCCCTACTCATCCTCGGCCGCGCCATGCAAGGCCTCGGCGCCGCTGCCTTTCTCCCCGCCGGC TTGGCCCTGCTTAGCAAGACGTACCGCCCCGGGCCCAGGAAGAATCTCGTCTTTGCTGTGTATGGCGCCTTTGCC TGCATTGGCTTTTACTTTGGCATCTTGGTGGGCGCCCTCGCCGCCCAGCTGGCTAACTGGCGCTGGTATTTTTGG ATCGGCGCAATCCTCGAAGCTGTTATTGCTGCTGCCGGTCTCTTTTCCATTCCCAAAGACTTGGCTGACCGCGAC CCCGACGCTCGCATGGACTGGTGGGGCTTGGGCACCATTGTCCCGGGCCTTGTTCTTGTCGTCTTTGCCTTTACC GATGGCCGCCATGCCCCGGACGGCTGGAACACGCCCTATATTTACGTCACCCTCATTGTTGGCGTCGTCTTGTTG GCCGCTGCCGTCTTTGTCGAGGGCTGGGTTGCCAAACAGCCGCTTGTCCCGCCCGCCCTGTTTAAGCCGCGCTAC ATGGTGCGCCTGGTGTGCGCTCTGTTTTGCTCCTATGGCGTCTTTGGCCTCTTTTTGTTTTATGCCAGCTTCTAG |