Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|3070
Gene name
LocationContig_2252:112..808
Strand+
Gene length (bp)696
Transcript length (bp)573
Coding sequence length (bp)573
Protein length (aa) 191

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14629 ORC4_C Origin recognition complex (ORC) subunit 4 C-terminus 1.1E-09 101 167

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y794|ORC4_SCHPO Origin recognition complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc4 PE=1 SV=1 1 158 4.0E-33
sp|O93479|ORC4_XENLA Origin recognition complex subunit 4 OS=Xenopus laevis GN=orc4 PE=2 SV=1 8 159 1.0E-29
sp|O43929|ORC4_HUMAN Origin recognition complex subunit 4 OS=Homo sapiens GN=ORC4 PE=1 SV=2 8 158 1.0E-28
sp|Q5R6Z7|ORC4_PONAB Origin recognition complex subunit 4 OS=Pongo abelii GN=ORC4 PE=2 SV=1 8 158 3.0E-28
sp|Q2YDI2|ORC4_BOVIN Origin recognition complex subunit 4 OS=Bos taurus GN=ORC4 PE=2 SV=1 8 158 6.0E-28
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y794|ORC4_SCHPO Origin recognition complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc4 PE=1 SV=1 1 158 4.0E-33
sp|O93479|ORC4_XENLA Origin recognition complex subunit 4 OS=Xenopus laevis GN=orc4 PE=2 SV=1 8 159 1.0E-29
sp|O43929|ORC4_HUMAN Origin recognition complex subunit 4 OS=Homo sapiens GN=ORC4 PE=1 SV=2 8 158 1.0E-28
sp|Q5R6Z7|ORC4_PONAB Origin recognition complex subunit 4 OS=Pongo abelii GN=ORC4 PE=2 SV=1 8 158 3.0E-28
sp|Q2YDI2|ORC4_BOVIN Origin recognition complex subunit 4 OS=Bos taurus GN=ORC4 PE=2 SV=1 8 158 6.0E-28
sp|O88708|ORC4_MOUSE Origin recognition complex subunit 4 OS=Mus musculus GN=Orc4 PE=1 SV=2 8 158 1.0E-25
sp|Q6P9Z8|ORC4_RAT Origin recognition complex subunit 4 OS=Rattus norvegicus GN=Orc4 PE=2 SV=1 8 158 2.0E-25
sp|Q4U3P8|ORC4_CRIGR Origin recognition complex subunit 4 OS=Cricetulus griseus GN=ORC4 PE=2 SV=1 8 158 2.0E-25
sp|P54791|ORC4_YEAST Origin recognition complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORC4 PE=1 SV=1 21 112 2.0E-21
sp|Q6EWX1|ORC4_ARATH Origin of replication complex subunit 4 OS=Arabidopsis thaliana GN=ORC4 PE=1 SV=1 24 94 1.0E-12
sp|Q5N8Q4|ORC4_ORYSJ Origin of replication complex subunit 4 OS=Oryza sativa subsp. japonica GN=ORC4 PE=2 SV=1 15 108 5.0E-12
sp|Q86AD6|ORC4_DICDI Origin recognition complex subunit 4 OS=Dictyostelium discoideum GN=orcD PE=3 SV=1 23 157 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|3070
MASLLALLSHPSEIMETETEVTSQAVIFIIDEFDLFASHARQTLLYNLFDIAQSRKAPIAVLGCTTRLDVVERLE
KRVKSRFSHRCIYLSLPRSLAAYWKVCRQGLVIERSEAESEGIDARLQGYDEFEKHWTRSIEELYKQQAFQRLLQ
YHFLATKSAAAFLSEWITRRQDWQGPSPGCTWGWPCRSWT*
Coding >OphauG2|3070
ATGGCTTCTCTACTCGCCCTGCTTTCTCACCCCTCGGAAATCATGGAGACGGAGACGGAGGTGACTTCGCAGGCT
GTCATCTTTATTATTGATGAATTCGATCTTTTTGCCTCTCACGCACGGCAGACGTTGCTCTACAACCTCTTTGAC
ATTGCACAGTCGCGCAAGGCGCCGATTGCGGTGCTGGGGTGCACGACGCGTCTCGACGTAGTGGAGAGACTGGAG
AAGAGAGTCAAGAGCCGCTTCAGCCATCGGTGCATCTATCTGTCGCTACCTCGCTCGCTGGCGGCCTACTGGAAG
GTTTGTCGTCAGGGACTGGTGATTGAGCGCAGCGAGGCGGAGAGCGAGGGCATTGACGCCAGGCTGCAAGGGTAC
GACGAGTTTGAGAAGCACTGGACTCGGTCCATTGAGGAACTGTACAAGCAGCAAGCTTTTCAAAGGCTGCTTCAG
TATCACTTCTTGGCCACCAAGTCGGCGGCGGCGTTCCTGTCCGAGTGGATCACGCGCCGGCAAGACTGGCAGGGC
CCGAGTCCCGGCTGCACGTGGGGGTGGCCCTGTCGGAGCTGGACGTGA
Transcript >OphauG2|3070
ATGGCTTCTCTACTCGCCCTGCTTTCTCACCCCTCGGAAATCATGGAGACGGAGACGGAGGTGACTTCGCAGGCT
GTCATCTTTATTATTGATGAATTCGATCTTTTTGCCTCTCACGCACGGCAGACGTTGCTCTACAACCTCTTTGAC
ATTGCACAGTCGCGCAAGGCGCCGATTGCGGTGCTGGGGTGCACGACGCGTCTCGACGTAGTGGAGAGACTGGAG
AAGAGAGTCAAGAGCCGCTTCAGCCATCGGTGCATCTATCTGTCGCTACCTCGCTCGCTGGCGGCCTACTGGAAG
GTTTGTCGTCAGGGACTGGTGATTGAGCGCAGCGAGGCGGAGAGCGAGGGCATTGACGCCAGGCTGCAAGGGTAC
GACGAGTTTGAGAAGCACTGGACTCGGTCCATTGAGGAACTGTACAAGCAGCAAGCTTTTCAAAGGCTGCTTCAG
TATCACTTCTTGGCCACCAAGTCGGCGGCGGCGTTCCTGTCCGAGTGGATCACGCGCCGGCAAGACTGGCAGGGC
CCGAGTCCCGGCTGCACGTGGGGGTGGCCCTGTCGGAGCTGGACGTGA
Gene >OphauG2|3070
ATGGCTTCTCTACTCGCCCTGCTTTCTCACCCCTCGGAAATCATGGAGACGGAGACGGAGGTGACTTCGCAGGCT
GTCATCTTTATTATTGATGAATTCGATCTTTTTGCCTCTCACGCACGGCAGACGTTGCTCTACAACCTCTTTGAC
ATTGCACAGTCGCGCAAGGCGCCGATTGCGGTGCTGGGGTGCACGACGCGTCTCGACGTAGTGGAGAGACTGGAG
AAGAGAGTCAAGAGCCGCTTCAGCCATCGGTGCATCTATCTGTCGCTACCTCGCTCGCTGGCGGCCTACTGGAAG
GTTTGTCGTCAGGGACTGGTGATTGAGCGCAGCGAGGCGGAGAGCGAGGGCATTGACGCCAGGCTGCAAGGGTAC
GACGAGTTTGAGAAGCACTGGACTCGGTCCATTGAGGTGGGCAGGCGTTGATGAAGCACGGGGGGATGGTGGGGA
TTGCTAACAAGGGGCGCGTCCAGGAACTGTACAAGCAGCAAGCTTTTCAAAGGCTGCTTCAGTATCACTTCTTGG
CCACCAAGTCGGCGGCGGCGTTCCTGTCCGAGTGGATCGTGCCACTGTCGCAGCTGACGCCCGACGACATGGAGC
TACAATGCCCGGCAATGGGGCCAGACGCGCCGGCAAGACTGGCAGGGCCCGAGTCCCGGCTGCACGTGGGGGTGG
CCCTGTCGGAGCTGGACGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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