Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|3063
Gene name
Location	Contig_225:5921..7426
Strand	+
Gene length (bp)	1505
Transcript length (bp)	1440
Coding sequence length (bp)	1440
Protein length (aa)	480

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06398	Pex24p	Integral peroxisomal membrane peroxin	8.5E-86	86	466

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03370\|PEX29_YEAST	Peroxisomal membrane protein PEX29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX29 PE=1 SV=1	16	471	1.0E-51
sp\|P38848\|PEX28_YEAST	Peroxisomal membrane protein PEX28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX28 PE=1 SV=1	55	414	2.0E-33

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	140	162	22
2	238	260	22
3	265	282	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|3063 MDDFTAEAVARAQHLPTRDAATPSCSADSADMAASSKGGLRSGLATMRQKATLQDRLVERLLQQVIPLDGHHGAS ADASPSLPQRPNFNLTTMSHNFRHFNARIGVVFDFQRDVERLFSWCHASHTLSFLAVYSLVCLDPYLLPALPMVL LVFAVLVPAFIARHPAPPRGTLSSEQSVAYSPRGPPLAPATTVRPAKEFSSDFLRNSRDLQNSMGDFTHAYDKIV ELLVPLTNFSNEALSSTVFLFLFAGALGLTLIAHIIPWRIIFLLGGWALVLLAHPSVKAVFRAKHQKHVQPHEGE ALSWLDRWIAQDVILDSAPETREVEIFELQHHDSDSGEWEPWLFSPSPYDPLSPPRIAGDRPRGSRFFEDVMPPP GWQWSEKKWALDLWSREWVEERIITGVEVETEGERWVYDMYTQHDDRTGVVEYLAKEPPAFRPRASPQPSWEESD DEGGKRGAWRRRRWVRLVKRKVATAEVIS*
Coding	>OphauG2\|3063 ATGGACGACTTTACCGCCGAAGCCGTTGCCAGAGCGCAGCATTTGCCCACTCGCGACGCTGCAACGCCCTCTTGC TCTGCCGACTCTGCCGACATGGCTGCCTCTTCCAAGGGCGGCCTGCGCAGCGGCCTGGCAACCATGCGCCAAAAG GCGACACTTCAAGATCGTCTGGTTGAAAGGCTTCTTCAGCAGGTAATTCCCCTCGATGGCCACCATGGCGCCTCT GCCGATGCATCGCCATCCCTGCCCCAGCGGCCCAATTTCAACTTGACCACCATGTCGCACAACTTCCGCCACTTC AACGCCCGAATCGGCGTTGTTTTCGACTTTCAGCGCGATGTCGAGCGCCTCTTCTCGTGGTGCCATGCCTCCCAC ACCCTCTCCTTTCTCGCCGTCTATTCCCTCGTCTGTCTTGATCCCTATCTTCTGCCCGCCCTGCCCATGGTTCTC CTCGTCTTCGCCGTCCTCGTCCCGGCCTTTATCGCCCGACATCCCGCCCCCCCGCGCGGCACATTGTCAAGCGAG CAATCTGTCGCCTACTCTCCTCGCGGCCCTCCACTGGCTCCCGCTACTACCGTGCGCCCCGCCAAGGAATTCAGC AGCGACTTTCTTCGCAACTCGCGCGACTTGCAGAACAGCATGGGAGACTTTACCCATGCCTATGACAAAATCGTC GAGCTGCTCGTGCCCCTCACAAATTTCAGCAACGAGGCCTTGTCCTCGACAGTCTTTTTATTTCTCTTCGCTGGC GCTCTCGGCCTCACCCTCATTGCCCACATCATTCCTTGGCGCATCATTTTCCTCCTTGGCGGCTGGGCTCTTGTT CTGCTAGCCCACCCATCAGTAAAGGCCGTCTTCCGAGCAAAACATCAGAAGCACGTCCAACCTCATGAAGGAGAG GCCCTCTCGTGGCTCGACCGCTGGATCGCCCAAGACGTCATTCTCGACTCGGCCCCCGAGACGCGCGAGGTGGAA ATCTTTGAACTCCAGCACCACGACTCAGACTCGGGCGAGTGGGAACCCTGGCTCTTTTCGCCCTCTCCCTATGAC CCCTTGTCGCCCCCGCGCATTGCCGGCGATAGGCCCCGTGGCTCTCGCTTCTTTGAGGATGTCATGCCCCCGCCC GGCTGGCAGTGGAGCGAAAAGAAGTGGGCTCTCGATCTCTGGAGCCGTGAATGGGTCGAGGAGCGCATCATTACA GGTGTCGAGGTGGAAACCGAAGGCGAGCGCTGGGTCTACGACATGTACACCCAGCATGACGACCGCACTGGCGTC GTCGAATACCTTGCCAAAGAGCCTCCTGCCTTTCGCCCCAGAGCCTCGCCTCAGCCAAGTTGGGAAGAAAGCGAC GACGAGGGCGGCAAGCGGGGCGCCTGGCGACGCAGACGATGGGTTCGCTTGGTCAAAAGAAAGGTTGCCACTGCA GAGGTTATTAGCTGA
Transcript	>OphauG2\|3063 ATGGACGACTTTACCGCCGAAGCCGTTGCCAGAGCGCAGCATTTGCCCACTCGCGACGCTGCAACGCCCTCTTGC TCTGCCGACTCTGCCGACATGGCTGCCTCTTCCAAGGGCGGCCTGCGCAGCGGCCTGGCAACCATGCGCCAAAAG GCGACACTTCAAGATCGTCTGGTTGAAAGGCTTCTTCAGCAGGTAATTCCCCTCGATGGCCACCATGGCGCCTCT GCCGATGCATCGCCATCCCTGCCCCAGCGGCCCAATTTCAACTTGACCACCATGTCGCACAACTTCCGCCACTTC AACGCCCGAATCGGCGTTGTTTTCGACTTTCAGCGCGATGTCGAGCGCCTCTTCTCGTGGTGCCATGCCTCCCAC ACCCTCTCCTTTCTCGCCGTCTATTCCCTCGTCTGTCTTGATCCCTATCTTCTGCCCGCCCTGCCCATGGTTCTC CTCGTCTTCGCCGTCCTCGTCCCGGCCTTTATCGCCCGACATCCCGCCCCCCCGCGCGGCACATTGTCAAGCGAG CAATCTGTCGCCTACTCTCCTCGCGGCCCTCCACTGGCTCCCGCTACTACCGTGCGCCCCGCCAAGGAATTCAGC AGCGACTTTCTTCGCAACTCGCGCGACTTGCAGAACAGCATGGGAGACTTTACCCATGCCTATGACAAAATCGTC GAGCTGCTCGTGCCCCTCACAAATTTCAGCAACGAGGCCTTGTCCTCGACAGTCTTTTTATTTCTCTTCGCTGGC GCTCTCGGCCTCACCCTCATTGCCCACATCATTCCTTGGCGCATCATTTTCCTCCTTGGCGGCTGGGCTCTTGTT CTGCTAGCCCACCCATCAGTAAAGGCCGTCTTCCGAGCAAAACATCAGAAGCACGTCCAACCTCATGAAGGAGAG GCCCTCTCGTGGCTCGACCGCTGGATCGCCCAAGACGTCATTCTCGACTCGGCCCCCGAGACGCGCGAGGTGGAA ATCTTTGAACTCCAGCACCACGACTCAGACTCGGGCGAGTGGGAACCCTGGCTCTTTTCGCCCTCTCCCTATGAC CCCTTGTCGCCCCCGCGCATTGCCGGCGATAGGCCCCGTGGCTCTCGCTTCTTTGAGGATGTCATGCCCCCGCCC GGCTGGCAGTGGAGCGAAAAGAAGTGGGCTCTCGATCTCTGGAGCCGTGAATGGGTCGAGGAGCGCATCATTACA GGTGTCGAGGTGGAAACCGAAGGCGAGCGCTGGGTCTACGACATGTACACCCAGCATGACGACCGCACTGGCGTC GTCGAATACCTTGCCAAAGAGCCTCCTGCCTTTCGCCCCAGAGCCTCGCCTCAGCCAAGTTGGGAAGAAAGCGAC GACGAGGGCGGCAAGCGGGGCGCCTGGCGACGCAGACGATGGGTTCGCTTGGTCAAAAGAAAGGTTGCCACTGCA GAGGTTATTAGCTGA
Gene	>OphauG2\|3063 ATGGACGACTTTACCGCCGAAGCCGTTGCCAGAGCGCAGCATTTGCCCACTCGCGACGCTGCAACGCCCTCTTGC TCTGCCGACTCTGCCGACATGGCTGCCTCTTCCAAGGGCGGCCTGCGCAGCGGCCTGGCAACCATGCGCCAAAAG GCGACACTTCAAGATCGTCTGGTTGAAAGGCGAGATTGACTGCATCCTCTCCGCACCTGCTACTTCTGCTAAGCC CTCGGCCTCTGCACAACAGGCTTCTTCAGCAGGTAATTCCCCTCGATGGCCACCATGGCGCCTCTGCCGATGCAT CGCCATCCCTGCCCCAGCGGCCCAATTTCAACTTGACCACCATGTCGCACAACTTCCGCCACTTCAACGCCCGAA TCGGCGTTGTTTTCGACTTTCAGCGCGATGTCGAGCGCCTCTTCTCGTGGTGCCATGCCTCCCACACCCTCTCCT TTCTCGCCGTCTATTCCCTCGTCTGTCTTGATCCCTATCTTCTGCCCGCCCTGCCCATGGTTCTCCTCGTCTTCG CCGTCCTCGTCCCGGCCTTTATCGCCCGACATCCCGCCCCCCCGCGCGGCACATTGTCAAGCGAGCAATCTGTCG CCTACTCTCCTCGCGGCCCTCCACTGGCTCCCGCTACTACCGTGCGCCCCGCCAAGGAATTCAGCAGCGACTTTC TTCGCAACTCGCGCGACTTGCAGAACAGCATGGGAGACTTTACCCATGCCTATGACAAAATCGTCGAGCTGCTCG TGCCCCTCACAAATTTCAGCAACGAGGCCTTGTCCTCGACAGTCTTTTTATTTCTCTTCGCTGGCGCTCTCGGCC TCACCCTCATTGCCCACATCATTCCTTGGCGCATCATTTTCCTCCTTGGCGGCTGGGCTCTTGTTCTGCTAGCCC ACCCATCAGTAAAGGCCGTCTTCCGAGCAAAACATCAGAAGCACGTCCAACCTCATGAAGGAGAGGCCCTCTCGT GGCTCGACCGCTGGATCGCCCAAGACGTCATTCTCGACTCGGCCCCCGAGACGCGCGAGGTGGAAATCTTTGAAC TCCAGCACCACGACTCAGACTCGGGCGAGTGGGAACCCTGGCTCTTTTCGCCCTCTCCCTATGACCCCTTGTCGC CCCCGCGCATTGCCGGCGATAGGCCCCGTGGCTCTCGCTTCTTTGAGGATGTCATGCCCCCGCCCGGCTGGCAGT GGAGCGAAAAGAAGTGGGCTCTCGATCTCTGGAGCCGTGAATGGGTCGAGGAGCGCATCATTACAGGTGTCGAGG TGGAAACCGAAGGCGAGCGCTGGGTCTACGACATGTACACCCAGCATGACGACCGCACTGGCGTCGTCGAATACC TTGCCAAAGAGCCTCCTGCCTTTCGCCCCAGAGCCTCGCCTCAGCCAAGTTGGGAAGAAAGCGACGACGAGGGCG GCAAGCGGGGCGCCTGGCGACGCAGACGATGGGTTCGCTTGGTCAAAAGAAAGGTTGCCACTGCAGAGGTTATTA GCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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