Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2964
Gene name
LocationContig_2175:144..1184
Strand+
Gene length (bp)1040
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08644 SPT16 FACT complex subunit (SPT16/CDC68) 1.3E-31 229 323
PF00557 Peptidase_M24 Metallopeptidase family M24 2.3E-12 3 104

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4HYB8|SPT16_GIBZE FACT complex subunit SPT16 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT16 PE=3 SV=1 1 322 0.0E+00
sp|Q8X0X6|SPT16_NEUCR FACT complex subunit ctc-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ctc-2 PE=3 SV=1 2 321 2.0E-179
sp|Q5B2X8|SPT16_EMENI FACT complex subunit spt16 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=spt16 PE=3 SV=2 2 321 1.0E-125
sp|Q4WJ02|SPT16_ASPFU FACT complex subunit spt16 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt16 PE=3 SV=1 2 321 1.0E-125
sp|Q2UBF1|SPT16_ASPOR FACT complex subunit spt16 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=spt16 PE=3 SV=1 2 321 6.0E-123
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Swissprot ID Swissprot Description Start End E-value
sp|Q4HYB8|SPT16_GIBZE FACT complex subunit SPT16 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPT16 PE=3 SV=1 1 322 0.0E+00
sp|Q8X0X6|SPT16_NEUCR FACT complex subunit ctc-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ctc-2 PE=3 SV=1 2 321 2.0E-179
sp|Q5B2X8|SPT16_EMENI FACT complex subunit spt16 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=spt16 PE=3 SV=2 2 321 1.0E-125
sp|Q4WJ02|SPT16_ASPFU FACT complex subunit spt16 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spt16 PE=3 SV=1 2 321 1.0E-125
sp|Q2UBF1|SPT16_ASPOR FACT complex subunit spt16 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=spt16 PE=3 SV=1 2 321 6.0E-123
sp|O94267|SPT16_SCHPO FACT complex subunit spt16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spt16 PE=1 SV=1 2 320 5.0E-93
sp|Q6BXE5|SPT16_DEBHA FACT complex subunit SPT16 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SPT16 PE=3 SV=2 10 321 1.0E-73
sp|Q4P2U5|SPT16_USTMA FACT complex subunit SPT16 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SPT16 PE=3 SV=1 8 320 5.0E-72
sp|Q6C931|SPT16_YARLI FACT complex subunit SPT16 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SPT16 PE=3 SV=1 6 320 1.0E-68
sp|Q756A7|SPT16_ASHGO FACT complex subunit SPT16 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SPT16 PE=3 SV=2 10 321 5.0E-61
sp|Q5A1D5|SPT16_CANAL FACT complex subunit SPT16 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SPT16 PE=3 SV=1 10 321 2.0E-59
sp|Q00976|SPT16_KLULA FACT complex subunit SPT16 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SPT16 PE=3 SV=2 19 321 6.0E-58
sp|P32558|SPT16_YEAST FACT complex subunit SPT16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT16 PE=1 SV=1 10 321 4.0E-57
sp|Q6FWT4|SPT16_CANGA FACT complex subunit SPT16 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SPT16 PE=3 SV=1 4 321 2.0E-55
sp|P0CQ22|SPT16_CRYNJ FACT complex subunit SPT16 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=SPT16 PE=3 SV=1 10 320 8.0E-54
sp|P0CQ23|SPT16_CRYNB FACT complex subunit SPT16 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=SPT16 PE=3 SV=1 10 320 9.0E-54
sp|Q920B9|SP16H_MOUSE FACT complex subunit SPT16 OS=Mus musculus GN=Supt16h PE=1 SV=2 11 304 3.0E-48
sp|Q9Y5B9|SP16H_HUMAN FACT complex subunit SPT16 OS=Homo sapiens GN=SUPT16H PE=1 SV=1 11 304 5.0E-48
sp|Q8IRG6|SPT16_DROME FACT complex subunit spt16 OS=Drosophila melanogaster GN=dre4 PE=1 SV=2 2 318 8.0E-46
sp|O82491|SPT16_ARATH FACT complex subunit SPT16 OS=Arabidopsis thaliana GN=SPT16 PE=1 SV=1 3 322 5.0E-42
sp|Q9W603|SP16H_XENLA FACT complex subunit SPT16 OS=Xenopus laevis GN=supt16h PE=1 SV=2 13 304 8.0E-41
sp|Q61E63|SPT16_CAEBR FACT complex subunit spt-16 OS=Caenorhabditis briggsae GN=spt-16 PE=3 SV=1 6 313 2.0E-39
sp|Q54S43|SPT16_DICDI FACT complex subunit SPT16 OS=Dictyostelium discoideum GN=spt16 PE=3 SV=1 2 304 2.0E-37
sp|Q9N5R9|SPT16_CAEEL FACT complex subunit spt-16 OS=Caenorhabditis elegans GN=spt-16 PE=3 SV=1 6 304 3.0E-37
sp|Q8H6B1|SPT16_MAIZE FACT complex subunit SPT16 OS=Zea mays GN=SPT16 PE=2 SV=1 3 322 1.0E-35
sp|Q7X923|SPT16_ORYSJ FACT complex subunit SPT16 OS=Oryza sativa subsp. japonica GN=SPT16 PE=2 SV=2 3 322 3.0E-34
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2964
MIHNTIIKEIRDGMAVKDVYAKALAIIKSKKPEMEKHFLKNVGWGIGLENRDPTLIINAKNARTLKDGMTLVIHT
GFQDIENPQPQDKSSKVYSLVLTDTIRVTTSEPVVFTAEAPTSADANSFFFKDDEEVEPPPKKEKKDSRVGAVAT
KNITNTRLRSERATQVDDDADKKRREHQKELAVKKQKEGLARFAESTSGQNGSEVKKFKRFESYKREDQFPPKIK
NLEIVVDAKNNTVVLPIMGRPVPFHINTIKNASKSDEGDFSFLRINFLSPGQGVGRKDDQPFEDASAHFVRSLTF
RSADGGRYSEIATQISNMKRDVK*
Coding >OphauG2|2964
ATGATACACAATACCATTATCAAGGAAATTCGGGATGGAATGGCAGTCAAGGATGTTTACGCCAAGGCTCTTGCC
ATCATCAAGAGCAAGAAGCCTGAAATGGAGAAGCATTTTCTCAAAAATGTTGGCTGGGGCATTGGCCTAGAGAAT
CGTGATCCCACCTTGATTATCAATGCCAAGAACGCGAGGACACTCAAGGATGGCATGACGCTTGTCATTCATACC
GGTTTCCAAGATATTGAGAATCCACAGCCCCAGGATAAGAGCAGCAAAGTCTACTCGCTTGTTCTCACGGATACC
ATTCGTGTGACGACAAGCGAGCCGGTTGTCTTTACGGCCGAGGCCCCGACAAGTGCAGACGCAAACTCCTTTTTT
TTCAAGGATGACGAGGAGGTGGAGCCCCCTCCCAAAAAGGAGAAGAAGGACTCGAGAGTCGGTGCTGTGGCTACT
AAGAATATCACAAACACCAGACTTCGATCTGAGCGTGCAACTCAAGTTGATGACGATGCGGATAAGAAGCGCAGA
GAACATCAAAAGGAGCTTGCAGTAAAGAAGCAAAAAGAGGGCCTGGCTAGATTTGCAGAATCTACAAGCGGGCAA
AACGGGTCCGAGGTGAAGAAGTTTAAACGATTCGAGTCGTATAAACGCGAAGATCAATTCCCCCCCAAGATCAAA
AACCTCGAGATTGTGGTCGATGCCAAGAACAACACGGTGGTATTGCCCATTATGGGGCGGCCAGTTCCATTTCAC
ATCAACACCATCAAAAACGCCAGCAAGAGTGACGAGGGCGACTTTTCTTTTTTGCGTATCAACTTTCTCTCTCCA
GGCCAGGGTGTGGGCCGCAAAGACGACCAGCCGTTTGAGGATGCATCGGCTCACTTTGTGCGCAGCTTGACATTC
CGGTCGGCGGATGGTGGCAGATATAGCGAAATCGCTACGCAAATATCCAACATGAAGCGTGACGTGAAGTGA
Transcript >OphauG2|2964
ATGATACACAATACCATTATCAAGGAAATTCGGGATGGAATGGCAGTCAAGGATGTTTACGCCAAGGCTCTTGCC
ATCATCAAGAGCAAGAAGCCTGAAATGGAGAAGCATTTTCTCAAAAATGTTGGCTGGGGCATTGGCCTAGAGAAT
CGTGATCCCACCTTGATTATCAATGCCAAGAACGCGAGGACACTCAAGGATGGCATGACGCTTGTCATTCATACC
GGTTTCCAAGATATTGAGAATCCACAGCCCCAGGATAAGAGCAGCAAAGTCTACTCGCTTGTTCTCACGGATACC
ATTCGTGTGACGACAAGCGAGCCGGTTGTCTTTACGGCCGAGGCCCCGACAAGTGCAGACGCAAACTCCTTTTTT
TTCAAGGATGACGAGGAGGTGGAGCCCCCTCCCAAAAAGGAGAAGAAGGACTCGAGAGTCGGTGCTGTGGCTACT
AAGAATATCACAAACACCAGACTTCGATCTGAGCGTGCAACTCAAGTTGATGACGATGCGGATAAGAAGCGCAGA
GAACATCAAAAGGAGCTTGCAGTAAAGAAGCAAAAAGAGGGCCTGGCTAGATTTGCAGAATCTACAAGCGGGCAA
AACGGGTCCGAGGTGAAGAAGTTTAAACGATTCGAGTCGTATAAACGCGAAGATCAATTCCCCCCCAAGATCAAA
AACCTCGAGATTGTGGTCGATGCCAAGAACAACACGGTGGTATTGCCCATTATGGGGCGGCCAGTTCCATTTCAC
ATCAACACCATCAAAAACGCCAGCAAGAGTGACGAGGGCGACTTTTCTTTTTTGCGTATCAACTTTCTCTCTCCA
GGCCAGGGTGTGGGCCGCAAAGACGACCAGCCGTTTGAGGATGCATCGGCTCACTTTGTGCGCAGCTTGACATTC
CGGTCGGCGGATGGTGGCAGATATAGCGAAATCGCTACGCAAATATCCAACATGAAGCGTGACGTGAAGTGA
Gene >OphauG2|2964
ATGATACACAATACCATTATCAAGGAAATTCGGGATGGAATGGCAGTCAAGGATGTTTACGCCAAGGCTCTTGCC
ATCATCAAGAGCAAGAAGCCTGAAATGGAGAAGCATTTTCTCAAAAATGTTGGCTGGGGCATTGGCCTAGAGAAT
CGTGATCCCACCTTGATTATCAATGCCAAGAACGCGAGGACACTCAAGGATGGCATGACGCTTGTCATTCATACC
GGTTTCCAAGATATTGAGAATCCACAGCCCCAGGATAAGAGCAGCAAAGTCTACTCGCTTGTTCTCACGGATACC
ATTCGTGTGACGACAAGCGAGCCGGTTGTCTTTACGGCCGAGGCCCCGACAAGTGCAGACGCAAACTCCTTTTTT
TTCAAGGATGACGAGGAGGTGGAGCCCCCTCCCAAAAAGGAGAAGAAGGACTCGAGAGTCGGTGCTGTGGCTACT
AAGAATATCACAAACACCAGACTTCGATCTGAGCGTGCAACTCAAGTTGATGACGATGCGGATAAGAAGCGCAGA
GAACATCAAAAGGAGCTTGCAGTAAAGAAGCAAAAAGAGGGCCTGGCTAGATTTGCAGAATCTACAAGCGGGCAA
AACGGGTCCGAGGTGAAGAAGTTTAAACGATTCGAGTCGTATAAACGCGAAGATCAATTCCCCCCCAAGATCAAA
AACCTCGAGATTGTGGTCGATGCCAAGAACAACACGGTGGTATTGCCCATTATGGGGCGGCCAGTTCCATTTCAC
ATCAACACCATCAAAAACGCCAGCAAGAGTGACGAGGGCGACTTTTCTTTTTTGCGTATCAACTTTCTCTCTCCA
GGCCAGGGTGTGGGCCGCAAAGACGACCAGCCGTTTGAGGATGCATCGGCTCACTTTGTGCGCAGCTTGACATTC
CGGTCGGCGGATGGTGGCAGATATAGCGAAATCGCTACGCAAATATCCAACATGAAGCGTGACGTGGTCAAGAGG
GAGCAGGAAAAGAAGGACATGGAGGATGTGGTTGAGCAAGACAAGCTGATGGAGATTAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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