© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2962 |
| Gene name | |
| Location | Contig_217:20123..21957 |
| Strand | - |
| Gene length (bp) | 1834 |
| Transcript length (bp) | 1719 |
| Coding sequence length (bp) | 1719 |
| Protein length (aa) | 573 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03547 | Mem_trans | Membrane transport protein | 6.8E-52 | 45 | 556 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14197|YDQ4_SCHPO | Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1 | 45 | 568 | 4.0E-90 |
| sp|P38355|YB8B_YEAST | Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 | 37 | 236 | 2.0E-50 |
| sp|P38355|YB8B_YEAST | Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1 | 393 | 569 | 4.0E-39 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 76 | 95 | 19 |
| 3 | 105 | 127 | 22 |
| 4 | 387 | 409 | 22 |
| 5 | 429 | 451 | 22 |
| 6 | 472 | 494 | 22 |
| 7 | 507 | 526 | 19 |
| 8 | 547 | 569 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2962 MDSTVATTSFRLATIARDAYDYPMRVFQPPPAEAHPSLPHLCLLVFEAVLEVVCVSLPGYIIARLGHFDADKQKF LANLNVMLFTPCLIFTKLASQLNAKKLSELAIIPAIFVVQTLVSWVVSILVAKVFRFNRRASNFVTAMGVFGNSN SLPISLVLSLSQTIKGLHWDRIPGDNDDEVGARGILYLLIFQQLGQLVRWSWGYHVLLASKDKYPEYQQQIAEQG QIRGHLSETHNAGEAQGLIEGLDGDTEDEDTRRSVDSRTFVPDGPTPIVGNSRTSLTDSSSEDEDSSKMAQSKGT QSGIKHRNTVVNTGSTNELTFPRVGSANQGIGRGGAMWTRSKATMTGKIQSLKRKASTSLSLLYQGLPRFIQVIL SCLSAISRKTSYFIWEFMNPPLWAMLIAVMVASIPTLQKLFFEEGSFVNNSVTNAVKSSGGVAVPLILVVLGANL ARNTMARDDSHDPEEEEVGTRLLVASLLSRMILPTMIMAPILALMAKYVPISILDDPIFIIVCFLLTGAPSALQL AQICQINNVYEKTMGRILFQSYVIWILPSTLVLVMMALEVVRWAAGS* |
| Coding | >OphauG2|2962 ATGGATTCTACAGTGGCAACAACATCTTTTCGTCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG GTTTTCCAACCCCCTCCTGCTGAGGCGCATCCGTCCCTGCCTCATTTATGTTTGCTTGTCTTCGAGGCTGTCCTC GAAGTTGTCTGCGTCAGTCTGCCCGGATACATCATTGCTCGCCTCGGCCACTTTGACGCCGATAAACAAAAGTTT TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGATCTTTACCAAACTGGCCTCTCAACTCAATGCCAAG AAACTGTCCGAACTTGCCATCATACCCGCCATCTTCGTCGTACAGACACTCGTATCTTGGGTTGTTTCAATATTG GTAGCCAAGGTATTTCGCTTCAATCGTCGAGCCTCGAATTTCGTCACCGCAATGGGCGTTTTCGGAAATTCCAAC TCTCTACCAATTTCTCTTGTTCTCTCCCTATCGCAAACCATCAAGGGGCTCCATTGGGACAGAATACCCGGCGAC AACGATGATGAGGTTGGGGCTCGAGGTATTCTGTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTGCGGTGG AGCTGGGGATACCACGTCCTCTTGGCGTCCAAAGACAAGTACCCCGAGTATCAGCAACAAATCGCCGAACAAGGC CAGATCCGGGGACATCTGAGTGAGACACATAATGCGGGCGAGGCTCAAGGTCTCATTGAAGGTCTCGACGGGGAT ACCGAAGACGAGGACACTCGCCGTAGCGTCGATTCGCGTACCTTTGTACCTGACGGTCCTACGCCTATCGTTGGC AATTCGAGGACCTCCTTGACGGACTCGAGTAGTGAAGACGAAGACTCTTCCAAAATGGCACAGTCCAAAGGAACT CAGTCCGGCATCAAACATCGAAATACCGTGGTCAATACCGGCAGCACCAATGAGTTGACCTTTCCTCGTGTGGGT AGCGCCAACCAAGGCATAGGCCGTGGCGGAGCTATGTGGACTCGATCCAAGGCCACCATGACTGGCAAAATACAG TCATTGAAAAGGAAAGCTTCTACGTCCCTCAGCCTACTCTACCAGGGCTTGCCTCGTTTTATACAAGTTATATTA TCTTGTTTGTCGGCAATCAGCAGGAAGACGAGTTATTTCATTTGGGAGTTCATGAATCCTCCTCTGTGGGCCATG CTCATTGCCGTCATGGTGGCATCAATTCCGACTTTACAGAAATTGTTTTTCGAAGAGGGCTCCTTTGTCAACAAT AGCGTAACCAACGCTGTCAAGTCGAGCGGCGGTGTCGCAGTTCCTCTGATTCTCGTCGTTTTGGGTGCCAATTTA GCGCGCAATACAATGGCCCGCGACGATAGCCATGACCCTGAAGAAGAGGAGGTGGGAACCAGGCTCTTGGTGGCA TCGCTGCTGAGTCGAATGATTCTTCCAACCATGATTATGGCTCCAATCTTGGCATTAATGGCCAAATATGTGCCC ATCAGCATCCTCGACGACCCCATCTTCATCATTGTCTGTTTCCTTCTCACAGGCGCCCCGAGCGCACTCCAGCTG GCACAAATATGCCAGATTAACAACGTGTACGAAAAGACGATGGGCAGAATACTCTTTCAAAGCTATGTCATATGG ATACTGCCCTCCACCTTGGTCCTTGTCATGATGGCCCTGGAAGTGGTTCGGTGGGCTGCTGGCTCGTGA |
| Transcript | >OphauG2|2962 ATGGATTCTACAGTGGCAACAACATCTTTTCGTCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG GTTTTCCAACCCCCTCCTGCTGAGGCGCATCCGTCCCTGCCTCATTTATGTTTGCTTGTCTTCGAGGCTGTCCTC GAAGTTGTCTGCGTCAGTCTGCCCGGATACATCATTGCTCGCCTCGGCCACTTTGACGCCGATAAACAAAAGTTT TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGATCTTTACCAAACTGGCCTCTCAACTCAATGCCAAG AAACTGTCCGAACTTGCCATCATACCCGCCATCTTCGTCGTACAGACACTCGTATCTTGGGTTGTTTCAATATTG GTAGCCAAGGTATTTCGCTTCAATCGTCGAGCCTCGAATTTCGTCACCGCAATGGGCGTTTTCGGAAATTCCAAC TCTCTACCAATTTCTCTTGTTCTCTCCCTATCGCAAACCATCAAGGGGCTCCATTGGGACAGAATACCCGGCGAC AACGATGATGAGGTTGGGGCTCGAGGTATTCTGTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTGCGGTGG AGCTGGGGATACCACGTCCTCTTGGCGTCCAAAGACAAGTACCCCGAGTATCAGCAACAAATCGCCGAACAAGGC CAGATCCGGGGACATCTGAGTGAGACACATAATGCGGGCGAGGCTCAAGGTCTCATTGAAGGTCTCGACGGGGAT ACCGAAGACGAGGACACTCGCCGTAGCGTCGATTCGCGTACCTTTGTACCTGACGGTCCTACGCCTATCGTTGGC AATTCGAGGACCTCCTTGACGGACTCGAGTAGTGAAGACGAAGACTCTTCCAAAATGGCACAGTCCAAAGGAACT CAGTCCGGCATCAAACATCGAAATACCGTGGTCAATACCGGCAGCACCAATGAGTTGACCTTTCCTCGTGTGGGT AGCGCCAACCAAGGCATAGGCCGTGGCGGAGCTATGTGGACTCGATCCAAGGCCACCATGACTGGCAAAATACAG TCATTGAAAAGGAAAGCTTCTACGTCCCTCAGCCTACTCTACCAGGGCTTGCCTCGTTTTATACAAGTTATATTA TCTTGTTTGTCGGCAATCAGCAGGAAGACGAGTTATTTCATTTGGGAGTTCATGAATCCTCCTCTGTGGGCCATG CTCATTGCCGTCATGGTGGCATCAATTCCGACTTTACAGAAATTGTTTTTCGAAGAGGGCTCCTTTGTCAACAAT AGCGTAACCAACGCTGTCAAGTCGAGCGGCGGTGTCGCAGTTCCTCTGATTCTCGTCGTTTTGGGTGCCAATTTA GCGCGCAATACAATGGCCCGCGACGATAGCCATGACCCTGAAGAAGAGGAGGTGGGAACCAGGCTCTTGGTGGCA TCGCTGCTGAGTCGAATGATTCTTCCAACCATGATTATGGCTCCAATCTTGGCATTAATGGCCAAATATGTGCCC ATCAGCATCCTCGACGACCCCATCTTCATCATTGTCTGTTTCCTTCTCACAGGCGCCCCGAGCGCACTCCAGCTG GCACAAATATGCCAGATTAACAACGTGTACGAAAAGACGATGGGCAGAATACTCTTTCAAAGCTATGTCATATGG ATACTGCCCTCCACCTTGGTCCTTGTCATGATGGCCCTGGAAGTGGTTCGGTGGGCTGCTGGCTCGTGA |
| Gene | >OphauG2|2962 ATGGATTCTACAGTGGCAACAACATCTTTTCGTCTCGCCACTATTGCCCGCGATGCCTACGACTATCCCATGAGG GTTTTCCAACCCCCTCCTGCTGAGGCGCATCCGTCCCTGCCTCATTTATGTTTGCTTGTCTTCGAGGCTGTCCTC GAAGTTGTCTGCGTCAGTCTGCCCGGATACATCATTGCTCGCCTCGGCCACTTTGACGCCGATAAACAAAAGTTT TTGGCAAATCTCAATGTGATGCTCTTCACGCCATGCCTGAGTATGTCTCTCTTCCCGCTACCTGAAGCTCGAGTT AATTTTTTTGTACTGCAGTCTTTACCAAACTGGCCTCTCAACTCAATGCCAAGAAACTGTCCGAACTTGCCATCA TACCCGCCATCTTCGTCGTACAGACACTCGTATCTTGGGTTGTTTCAATATTGGTAGCCAAGGTATTTCGCTTCA ATCGTCGAGCCTCGAATTTCGTCACCGCAATGGGCGTTTTCGGAAATTCCAACTCTCTACCAATTTCTCTTGTTC TCTCCCTATCGCAAACCATCAAGGGGCTCCATTGGGACAGAATACCCGGCGACAACGATGATGAGGTTGGGGCTC GAGGTATTCTGTATCTCCTCATATTCCAACAGCTCGGCCAACTCGTGCGGTGGAGCTGGGGATACCACGTCCTCT TGGCGTCCAAAGACAAGTACCCCGAGTATCAGCAACAAATCGCCGAACAAGGCCAGATCCGGGGACATCTGAGTG AGACACATAATGCGGGCGAGGCTCAAGGTCTCATTGAAGGTCTCGACGGGGATACCGAAGACGAGGACACTCGCC GTAGCGTCGATTCGCGTACCTTTGTACCTGACGGTCCTACGCCTATCGTTGGCAATTCGAGGACCTCCTTGACGG ACTCGAGTAGTGAAGACGAAGACTCTTCCAAAATGGCACAGTCCAAAGGAACTCAGTCCGGCATCAAACATCGAA ATACCGTGGTCAATACCGGCAGCACCAATGAGTTGACCTTTCCTCGTGTGGGTAGCGCCAACCAAGGCATAGGCC GTGGCGGAGCTATGTGGACTCGATCCAAGGCCACCATGACTGGCAAAATACAGTCATTGAAAAGGAAAGCTTCTA CGTCCCTCAGCCTACTCTACCAGGGCTTGCCTCGTTTTATACAAGTTATATTATCTTGTTTGTCGGCAATCAGCA GGAAGACGAGTTATTTCATTTGGGAGTTCATGAATCCTCCTCTGTGGGCCATGCTCATTGCCGTCATGGTGGCAT CAATTCCGACTTTACAGAAATTGTTTTTCGAAGAGGGCTCCTTTGTCAACAATAGCGTAACCAACGCTGTCAAGT CGAGCGGCGGTGTCGCAGTTCCTCTGATTCTCGTCGTTTTGGGTGCCAATTTAGCGCGCAATACAATGGCCCGCG ACGATAGCCATGACCCTGAAGAAGAGGAGGTGGGAACCAGGCTCTTGGTGGCATCGCTGCTGAGTCGAATGATTC TTCCAACCATGATTATGGCTCCAATCTTGGCATTAATGGCCAAATATGTGCCCATCAGCATCCTCGACGACCCCA TCTTCATCATTGTCTGTTTCCTTCTCACAGGCGCCCCGAGCGCACTCCAGCTGGCACAAATATGCCAGATTAACA ACGTGTACGAAAAGACGATGGGCAGAATACTCTTTCAAAGCTATGTCATATGGTAAGCGCCCCGTCAACGAATTC TTTAAATATGGTGTAGATGAGGAGCTAACTATATTAAAGGATACTGCCCTCCACCTTGGTCCTTGTCATGATGGC CCTGGAAGTGGTTCGGTGGGCTGCTGGCTCGTGA |