Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2928
Gene name
LocationContig_214:22491..23610
Strand+
Gene length (bp)1119
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 9.1E-17 57 270
PF00324 AA_permease Amino acid permease 7.4E-08 61 275

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 21 261 2.0E-31
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 32 273 4.0E-27
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 25 272 1.0E-26
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 41 269 2.0E-26
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 11 260 1.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 21 261 2.0E-31
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 32 273 4.0E-27
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 25 272 1.0E-26
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 41 269 2.0E-26
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 11 260 1.0E-20
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 16 257 3.0E-19
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 37 262 3.0E-19
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 38 265 5.0E-19
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 37 260 9.0E-19
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 34 259 6.0E-18
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 1 272 2.0E-16
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 36 272 1.0E-11
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 33 277 5.0E-10
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 10 247 1.0E-09
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 8 262 3.0E-07
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0051179 localization No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

Domain # Start End Length
1 57 79 22
2 89 108 19
3 141 163 22
4 186 208 22
5 215 234 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2928
MHVPQASDSKHHEMLQEGNMDPKLEQAPRPSISDGAEDQILESLGYKAELARNRSALQVAFMSFVLAAIPYGLAT
TLNYPLVGGGPVNIIWGWVLVSAIILCVASSLAEITSVYPTAGGVYYQAFMLASARWRRIASWTCGWLYVVGNIA
ITLSVNFGTTLFLVSCINVFEKEPGVPVFDASNWETYLIFLAITILCNATSALGNRWLPWLDTAAIFVTFGGVIA
IMISVLVIAKHGRHNAKYVFTHFESHSGWPDGWSFCVGLLHAGYATSSTGMVIS*
Coding >OphauG2|2928
ATGCATGTCCCCCAGGCCAGCGATAGCAAGCATCACGAGATGCTGCAAGAGGGCAACATGGACCCCAAGCTGGAG
CAGGCCCCGCGGCCCTCCATCTCGGACGGAGCCGAAGACCAGATCCTCGAAAGCCTAGGATACAAGGCCGAGCTG
GCGCGCAACCGGTCGGCGCTGCAAGTTGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCATACGGCTTGGCCACA
ACCCTCAACTACCCCCTCGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTGTCTGCCATTATT
CTCTGTGTCGCTTCGTCCCTTGCTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTGTATACTACCAGGCCTTT
ATGCTTGCGTCTGCCCGTTGGCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCA
ATCACCCTGTCTGTCAACTTTGGCACAACCCTGTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAGGAGCCGGGC
GTTCCAGTCTTTGACGCCTCCAACTGGGAGACGTATCTCATCTTCCTGGCCATTACCATTTTGTGCAATGCCACT
TCTGCACTGGGCAATCGATGGCTGCCCTGGCTTGATACGGCCGCCATTTTTGTGACGTTTGGTGGCGTCATTGCC
ATCATGATTTCCGTTCTCGTCATTGCCAAACACGGCCGCCACAATGCGAAATACGTCTTTACGCATTTTGAGTCA
CATTCCGGCTGGCCAGACGGGTGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCTTCAACAGGC
ATGGTGATCTCGTGA
Transcript >OphauG2|2928
ATGCATGTCCCCCAGGCCAGCGATAGCAAGCATCACGAGATGCTGCAAGAGGGCAACATGGACCCCAAGCTGGAG
CAGGCCCCGCGGCCCTCCATCTCGGACGGAGCCGAAGACCAGATCCTCGAAAGCCTAGGATACAAGGCCGAGCTG
GCGCGCAACCGGTCGGCGCTGCAAGTTGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCATACGGCTTGGCCACA
ACCCTCAACTACCCCCTCGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTGTCTGCCATTATT
CTCTGTGTCGCTTCGTCCCTTGCTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTGTATACTACCAGGCCTTT
ATGCTTGCGTCTGCCCGTTGGCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCA
ATCACCCTGTCTGTCAACTTTGGCACAACCCTGTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAGGAGCCGGGC
GTTCCAGTCTTTGACGCCTCCAACTGGGAGACGTATCTCATCTTCCTGGCCATTACCATTTTGTGCAATGCCACT
TCTGCACTGGGCAATCGATGGCTGCCCTGGCTTGATACGGCCGCCATTTTTGTGACGTTTGGTGGCGTCATTGCC
ATCATGATTTCCGTTCTCGTCATTGCCAAACACGGCCGCCACAATGCGAAATACGTCTTTACGCATTTTGAGTCA
CATTCCGGCTGGCCAGACGGGTGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCTTCAACAGGC
ATGGTGATCTCGTGA
Gene >OphauG2|2928
ATGCATGTCCCCCAGGCCAGCGATAGCAAGCATCACGAGATGCTGCAAGAGGGCAACATGGACCCCAAGCTGGAG
CAGGCCCCGCGGCCCTCCATCTCGGACGGAGCCGAAGACCAGATCCTCGAAAGCCTAGGATACAAGGCCGAGCTG
GCGCGCAACCGGTCGGCGCTGCAAGTTGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCATACGGCTTGGCCACA
ACCCTCAACTACCCCCTCGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTGTCTGCCATTATT
CTCTGTGTCGCTTCGTCCCTTGCTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTATATATACTTTGACCGCT
CCGAGTCCCGTTGACGTGTCTTGTTCCGAAAAAAAAAAAGACGCCTTTGCGCTCGAGAAATCCTTCCCGTCTCCC
CGCTCGGCCGTGAGGTGCATAATGGTTGATTGTCGTCTTCTCCTTCAGGTGTATACTACCAGGCCTTTATGCTTG
CGTCTGCCCGTTGGCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCAATCACCC
TGTCTGTCAACTTTGGCACAACCCTGTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAGGAGCCGGGCGTTCCAG
TCTTTGACGCCTCCAACTGGGAGACGTATCTCATCTTCCTGGCCATTACCATTTTGTGCAATGCCACTTCTGCAC
TGGGCAATCGATGGCTGCCCTGGCTTGATGTAAGAATTTGCAGTCCAGCCACTTGATTGATTTGTTGTATTCTCC
CCTCATGCCGTCTTGTGCTGCCTCGGGCTTCCAGTGTTTCCTCGAGGTGCCGTGTTACCCATCCCCGGTTGCTAA
CCTGCTGCTGCCCAGACGGCCGCCATTTTTGTGACGTTTGGTGGCGTCATTGCCATCATGATTTCCGTTCTCGTC
ATTGCCAAACACGGCCGCCACAATGCGAAATACGTCTTTACGCATTTTGAGTCACATTCCGGCTGGCCAGACGGG
TGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCTTCAACAGGCATGGTGATCTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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