© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2922 |
| Gene name | |
| Location | Contig_214:9416..10474 |
| Strand | - |
| Gene length (bp) | 1058 |
| Transcript length (bp) | 672 |
| Coding sequence length (bp) | 672 |
| Protein length (aa) | 224 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05670 | NFACT-R_1 | NFACT protein RNA binding domain | 8.1E-34 | 1 | 122 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7T312|CCD25_DANRE | Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25 PE=1 SV=1 | 1 | 223 | 4.0E-54 |
| sp|Q78PG9|CCD25_MOUSE | Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25 PE=1 SV=1 | 1 | 165 | 2.0E-51 |
| sp|Q6GLE1|CCD25_XENTR | Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis GN=ccdc25 PE=2 SV=1 | 1 | 223 | 6.0E-51 |
| sp|Q5R9S1|CCD25_PONAB | Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25 PE=2 SV=2 | 1 | 168 | 8.0E-51 |
| sp|Q86WR0|CCD25_HUMAN | Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25 PE=1 SV=2 | 1 | 168 | 8.0E-51 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7T312|CCD25_DANRE | Coiled-coil domain-containing protein 25 OS=Danio rerio GN=ccdc25 PE=1 SV=1 | 1 | 223 | 4.0E-54 |
| sp|Q78PG9|CCD25_MOUSE | Coiled-coil domain-containing protein 25 OS=Mus musculus GN=Ccdc25 PE=1 SV=1 | 1 | 165 | 2.0E-51 |
| sp|Q6GLE1|CCD25_XENTR | Coiled-coil domain-containing protein 25 OS=Xenopus tropicalis GN=ccdc25 PE=2 SV=1 | 1 | 223 | 6.0E-51 |
| sp|Q5R9S1|CCD25_PONAB | Coiled-coil domain-containing protein 25 OS=Pongo abelii GN=CCDC25 PE=2 SV=2 | 1 | 168 | 8.0E-51 |
| sp|Q86WR0|CCD25_HUMAN | Coiled-coil domain-containing protein 25 OS=Homo sapiens GN=CCDC25 PE=1 SV=2 | 1 | 168 | 8.0E-51 |
| sp|Q3SZX8|CCD25_BOVIN | Coiled-coil domain-containing protein 25 OS=Bos taurus GN=CCDC25 PE=2 SV=1 | 1 | 160 | 8.0E-51 |
| sp|Q55D55|CCD25_DICDI | Coiled-coil domain-containing protein 25 homolog OS=Dictyostelium discoideum GN=ccdc25 PE=3 SV=1 | 1 | 223 | 2.0E-46 |
| sp|P40206|JLP2_YEAST | Protein JLP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JLP2 PE=1 SV=2 | 1 | 148 | 7.0E-27 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2922 MVYYFSSTVVDPAAVIYVGKDKFENEDLIKFGWDQDVCHIPHLVPCYRFHVDKLSSAHVYLRMQEGQAWDALPND LVEDLAQLTKANSIEGNKKDNITVIYTPWSNLKKDGRMDVGQVSFKDARLVKRILVPQRVNAIVNRLNKTKVEKK PDFRQERDDHLKELRKRENLAQEQRKREEAKQAQEWQQKKWQKDHAYDDMFTEENMLASSNQTRQEDWEDDFM* |
| Coding | >OphauG2|2922 ATGGTCTACTACTTCTCCTCGACCGTCGTCGACCCTGCAGCCGTCATCTATGTCGGCAAAGACAAGTTTGAGAAC GAAGATCTCATCAAATTTGGCTGGGACCAAGATGTCTGTCACATTCCTCATCTTGTTCCCTGCTATAGGTTTCAC GTCGACAAGCTTTCCAGTGCTCATGTCTATCTCCGAATGCAAGAGGGCCAGGCTTGGGACGCGCTGCCCAATGAC CTTGTTGAGGATCTTGCCCAGTTGACAAAGGCAAACTCTATAGAGGGGAACAAAAAGGATAACATTACCGTCATT TACACACCTTGGTCAAATCTCAAAAAGGATGGGCGCATGGACGTGGGCCAAGTGAGCTTTAAGGATGCCCGACTG GTGAAGCGCATCTTGGTGCCCCAACGCGTCAATGCCATTGTCAACCGTCTTAACAAGACAAAGGTTGAGAAGAAG CCCGACTTTAGACAGGAGCGAGATGATCACCTCAAGGAGCTGCGTAAAAGAGAAAATCTCGCCCAAGAACAACGA AAGAGGGAAGAGGCCAAACAGGCACAAGAGTGGCAACAGAAAAAGTGGCAAAAGGACCACGCATATGACGACATG TTTACTGAAGAGAACATGCTTGCCTCTAGCAACCAAACCCGGCAAGAAGATTGGGAGGACGACTTTATGTAG |
| Transcript | >OphauG2|2922 ATGGTCTACTACTTCTCCTCGACCGTCGTCGACCCTGCAGCCGTCATCTATGTCGGCAAAGACAAGTTTGAGAAC GAAGATCTCATCAAATTTGGCTGGGACCAAGATGTCTGTCACATTCCTCATCTTGTTCCCTGCTATAGGTTTCAC GTCGACAAGCTTTCCAGTGCTCATGTCTATCTCCGAATGCAAGAGGGCCAGGCTTGGGACGCGCTGCCCAATGAC CTTGTTGAGGATCTTGCCCAGTTGACAAAGGCAAACTCTATAGAGGGGAACAAAAAGGATAACATTACCGTCATT TACACACCTTGGTCAAATCTCAAAAAGGATGGGCGCATGGACGTGGGCCAAGTGAGCTTTAAGGATGCCCGACTG GTGAAGCGCATCTTGGTGCCCCAACGCGTCAATGCCATTGTCAACCGTCTTAACAAGACAAAGGTTGAGAAGAAG CCCGACTTTAGACAGGAGCGAGATGATCACCTCAAGGAGCTGCGTAAAAGAGAAAATCTCGCCCAAGAACAACGA AAGAGGGAAGAGGCCAAACAGGCACAAGAGTGGCAACAGAAAAAGTGGCAAAAGGACCACGCATATGACGACATG TTTACTGAAGAGAACATGCTTGCCTCTAGCAACCAAACCCGGCAAGAAGATTGGGAGGACGACTTTATGTAG |
| Gene | >OphauG2|2922 ATGGTCTACTACTTCTCCTCGACCGTCGTCGACCCTGCAGCCGTCATCTATGTCGGCAAAGACAAGTTTGAGAGT AGGTCCACGGCAGACGGCCCCATGTGCATGCCAGAGCAATGCGCAGTAGCCTGTCTTTTCTCACATTGACTAGAC GAAGATCTCATCAAATTTGGCTGGGACCAAGATGTCTGGTAAGCACAGCTTCCAGCCCCTTCAGCCCAGAAGTGC GCCAAGTCACATTCCTCATCTTGTTCCCTGCTATAGGGTAAGCCTCTTGCTGCCTGCGCATGCAAGCATCATGCT CTTTTGACATGGCAATAGTTTCACGTCGACAAGCTTTCCAGTGCTCATGTCTATCTCCGAATGCAAGAGGGCCAG GCTTGGGACGCGCTGCCCAATGACCTTGTTGAGGATCTTGCCCAGTTGACAAAGGCAAACTCTATAGAGGGTACT TTGTTTCTCAGCTCGCCCTCGAGCCAGCACTCTCTCTCTCTCCCGCTCCAGGCTGACTCGAGCAGGGAACAAAAA GGATAACATTACCGTCATTTACACACCTTGGTCAAATCTCAAAAAGGATGGGCGCATGGACGTGGGCCAAGTGAG CTTTAAGGATGCCCGACTGGTGAGTCTTTTTTTTTTTCCTTTTTGGTCCAATATTGCTACGCCATGCGCGCAGAC TGATGATTCAGGTGTAGGTGAAGCGCATCTTGGTGCCCCAACGCGTCAATGCCATTGTCAACCGTCTTAACAAGA CAAAGGTTGAGAAGAAGCCCGACTTTAGACAGGAGCGAGATGATCACCTCAAGGAGCTGCGTAAAAGAGAAAATC TCGCCCAAGAACAACGAGTCTGTAGATTCCATGTTTTTTTTCTTATCCTTCTTTTGAATGGTGTGCGCGATATTA ACACGTCACAGAAGAGGGAAGAGGCCAAACAGGCACAAGAGTGGCAACAGAAAAAGTGGCAAAAGGACCACGCAT ATGACGACATGTTTACTGAAGAGAACATGCTTGCCTCTAGCAACCAAACCCGGCAAGAAGATTGGGAGGACGACT TTATGTAG |