Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2887
Gene name
LocationContig_2116:67..1147
Strand+
Gene length (bp)1080
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18004 RPN2_C 26S proteasome regulatory subunit RPN2 C-terminal domain 8.6E-52 111 306

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O74762|RPN2_SCHPO 26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn2 PE=1 SV=1 1 308 7.0E-73
sp|Q75CF3|RPN2_ASHGO 26S proteasome regulatory subunit RPN2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPN2 PE=3 SV=1 2 302 3.0E-61
sp|Q6FIP2|RPN2_CANGA 26S proteasome regulatory subunit RPN2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPN2 PE=3 SV=1 2 308 3.0E-57
sp|Q9MAT0|PSD1B_ARATH 26S proteasome non-ATPase regulatory subunit 1 homolog B OS=Arabidopsis thaliana GN=RPN2B PE=1 SV=1 3 306 5.0E-53
sp|O48844|PSD1A_ARATH 26S proteasome non-ATPase regulatory subunit 1 homolog A OS=Arabidopsis thaliana GN=RPN2A PE=1 SV=1 3 306 8.0E-53
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O74762|RPN2_SCHPO 26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn2 PE=1 SV=1 1 308 7.0E-73
sp|Q75CF3|RPN2_ASHGO 26S proteasome regulatory subunit RPN2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPN2 PE=3 SV=1 2 302 3.0E-61
sp|Q6FIP2|RPN2_CANGA 26S proteasome regulatory subunit RPN2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPN2 PE=3 SV=1 2 308 3.0E-57
sp|Q9MAT0|PSD1B_ARATH 26S proteasome non-ATPase regulatory subunit 1 homolog B OS=Arabidopsis thaliana GN=RPN2B PE=1 SV=1 3 306 5.0E-53
sp|O48844|PSD1A_ARATH 26S proteasome non-ATPase regulatory subunit 1 homolog A OS=Arabidopsis thaliana GN=RPN2A PE=1 SV=1 3 306 8.0E-53
sp|Q9V3P6|PSMD1_DROME 26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1 3 296 2.0E-51
sp|P32565|RPN2_YEAST 26S proteasome regulatory subunit RPN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN2 PE=1 SV=4 2 308 5.0E-50
sp|Q5F418|PSMD1_CHICK 26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1 2 161 5.0E-47
sp|O88761|PSMD1_RAT 26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=1 SV=1 2 161 6.0E-46
sp|Q3TXS7|PSMD1_MOUSE 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1 2 161 8.0E-46
sp|Q54JM5|PSMD1_DICDI 26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium discoideum GN=psmD1 PE=1 SV=1 3 183 5.0E-44
sp|Q99460|PSMD1_HUMAN 26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2 2 308 2.0E-42
sp|Q5R5S4|PSMD1_PONAB 26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1 2 308 3.0E-42
sp|Q18115|PSMD1_CAEEL 26S proteasome non-ATPase regulatory subunit 1 OS=Caenorhabditis elegans GN=rpn-2 PE=3 SV=4 1 311 1.0E-34
sp|Q8SSH5|RPN2_ENCCU 26S proteasome regulatory subunit RPN2 OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPN2 PE=1 SV=1 1 120 2.0E-15
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2887
MKDPTDFVRQGALIALSMIMVQQNEAMNPKVASIRKTLKRVVGDRHEDAMTKFGAAIALGIIDAGGRNCTIGLQT
QTGNLNMAGIVGMAVFTQYWYWFPFTHFLCLSFSPTAIIGLDHDLDIPDFRFHCAARQSLFDYPPEQEVKAEEGP
TVVAAAILSTTAQAKRRAQKKERAQRRESMDLDTAPPTAKSVADKAAVGDKMDIDDEGKKKDEAKDKKEAEDKEA
ATTTTTTTATAASSDAKTSDTKSTKKPEKEKIGFEIGNMSRVLPSQLKYISLPAGRYKAVKKPTGGPLLLIDSQP
DEAKALLEEKLKKW*
Coding >OphauG2|2887
ATGAAGGACCCGACCGACTTTGTGCGCCAGGGCGCGCTCATTGCCCTGTCCATGATTATGGTGCAGCAGAATGAG
GCCATGAACCCCAAGGTGGCGTCGATTCGCAAGACGCTCAAGCGCGTCGTCGGCGACCGCCACGAGGATGCCATG
ACCAAGTTTGGCGCCGCCATTGCCCTGGGCATCATTGACGCGGGAGGGCGCAACTGCACCATTGGCCTGCAGACG
CAGACGGGCAACCTCAACATGGCTGGCATTGTGGGCATGGCCGTCTTTACCCAGTACTGGTACTGGTTCCCCTTT
ACGCACTTTTTGTGCCTGAGCTTCTCGCCCACGGCCATTATTGGGCTCGACCACGACCTGGACATTCCCGACTTT
AGGTTCCACTGCGCCGCGCGCCAGAGCCTGTTTGACTACCCGCCCGAGCAAGAGGTCAAGGCGGAGGAAGGGCCG
ACGGTGGTGGCGGCCGCCATTTTGTCCACGACGGCGCAGGCGAAGCGCCGGGCGCAAAAGAAGGAGCGCGCGCAG
CGCCGCGAGAGCATGGATCTGGACACGGCGCCGCCAACGGCCAAGAGCGTGGCCGACAAGGCGGCCGTCGGCGAC
AAGATGGACATTGACGACGAGGGCAAGAAGAAGGACGAGGCCAAGGATAAAAAGGAGGCTGAGGATAAGGAGGCG
GCGACGACGACGACGACGACGACGGCGACGGCAGCGTCGAGCGACGCCAAGACGAGCGACACCAAGTCGACCAAG
AAGCCGGAAAAGGAAAAGATTGGCTTTGAAATTGGAAACATGAGCCGCGTGCTGCCCAGCCAACTCAAGTATATA
AGCCTGCCCGCGGGCCGCTACAAGGCTGTCAAGAAGCCAACGGGCGGACCGCTGCTGCTCATTGACTCGCAGCCC
GACGAGGCCAAGGCGCTGCTCGAGGAGAAGCTGAAAAAGTGGTGA
Transcript >OphauG2|2887
ATGAAGGACCCGACCGACTTTGTGCGCCAGGGCGCGCTCATTGCCCTGTCCATGATTATGGTGCAGCAGAATGAG
GCCATGAACCCCAAGGTGGCGTCGATTCGCAAGACGCTCAAGCGCGTCGTCGGCGACCGCCACGAGGATGCCATG
ACCAAGTTTGGCGCCGCCATTGCCCTGGGCATCATTGACGCGGGAGGGCGCAACTGCACCATTGGCCTGCAGACG
CAGACGGGCAACCTCAACATGGCTGGCATTGTGGGCATGGCCGTCTTTACCCAGTACTGGTACTGGTTCCCCTTT
ACGCACTTTTTGTGCCTGAGCTTCTCGCCCACGGCCATTATTGGGCTCGACCACGACCTGGACATTCCCGACTTT
AGGTTCCACTGCGCCGCGCGCCAGAGCCTGTTTGACTACCCGCCCGAGCAAGAGGTCAAGGCGGAGGAAGGGCCG
ACGGTGGTGGCGGCCGCCATTTTGTCCACGACGGCGCAGGCGAAGCGCCGGGCGCAAAAGAAGGAGCGCGCGCAG
CGCCGCGAGAGCATGGATCTGGACACGGCGCCGCCAACGGCCAAGAGCGTGGCCGACAAGGCGGCCGTCGGCGAC
AAGATGGACATTGACGACGAGGGCAAGAAGAAGGACGAGGCCAAGGATAAAAAGGAGGCTGAGGATAAGGAGGCG
GCGACGACGACGACGACGACGACGGCGACGGCAGCGTCGAGCGACGCCAAGACGAGCGACACCAAGTCGACCAAG
AAGCCGGAAAAGGAAAAGATTGGCTTTGAAATTGGAAACATGAGCCGCGTGCTGCCCAGCCAACTCAAGTATATA
AGCCTGCCCGCGGGCCGCTACAAGGCTGTCAAGAAGCCAACGGGCGGACCGCTGCTGCTCATTGACTCGCAGCCC
GACGAGGCCAAGGCGCTGCTCGAGGAGAAGCTGAAAAAGTGGTGA
Gene >OphauG2|2887
ATGAAGGACCCGACCGACTTTGTGCGCCAGGGCGCGCTCATTGCCCTGTCCATGATTATGGTGCAGCAGAATGAG
GCCATGAACCCCAAGGTGGCGTCGATTCGCAAGACGCTCAAGCGCGTCGTCGGCGACCGCCACGAGGATGCCATG
ACCAAGTTTGGCGCCGCCATTGCCCTGGGCATCATTGACGCGGGAGGGCGCAACTGCACCATTGGCCTGCAGACG
CAGACGGGCAACCTCAACATGGCTGGCATTGTGGGCATGGCCGTCTTTACCCAGTACTGGTACTGGTTCCCCTTT
ACGCACTTTTTGTGCCTGAGCTTCTCGCCCACGGCCATTATTGGGCTCGACCACGACCTGGACATTCCCGACTTT
AGGTTCCACTGCGCCGCGCGCCAGAGCCTGTTTGACTACCCGCCCGAGCAAGAGGTCAAGGCGGAGGAAGGGCCG
ACGGTGGTGGCGGCCGCCATTTTGTCCACGACGGCGCAGGCGAAGCGCCGGGCGCAAAAGAAGGAGCGCGCGCAG
CGCCGCGAGAGCATGGATCTGGACACGGCGCCGCCAACGGCCAAGAGCGTGGCCGACAAGGCGGCCGTCGGCGAC
AAGATGGACATTGACGACGAGGGCAAGAAGAAGGACGAGGCCAAGGATAAAAAGGAGGCTGAGGATAAGGAGGCG
GCGACGACGACGACGACGACGACGGCGACGGCAGCGTCGAGCGACGCCAAGACGAGCGACACCAAGTCGACCAAG
AAGCCGGAAAAGGAAAAGATTGGCTTTGAAATTGGAAACATGAGCCGCGTGCTGCCCAGCCAACTCAAGTATATA
AGCCTGCCCGCGGGCCGCTACAAGGCTGTCAAGAAGGTACCCTCTCTCTCTCAGCCCCAAGACACGCACGCACAA
CACCTTTGCAGGCGCCGCCTCTTGCTAACCAGCTCTTGCAACAGCCAACGGGCGGACCGCTGCTGCTCATTGACT
CGCAGCCCGACGAGGCCAAGGCGCTGCTCGAGGAGAAGCTGAAAAAGGTGACTACGGAGCGCGCGCCCGTGGCCG
GACAGAGCGGCCACCGCGCCCAAGTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail