© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2851 |
| Gene name | |
| Location | Contig_21:34612..35506 |
| Strand | - |
| Gene length (bp) | 894 |
| Transcript length (bp) | 894 |
| Coding sequence length (bp) | 894 |
| Protein length (aa) | 298 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00657 | Lipase_GDSL | GDSL-like Lipase/Acylhydrolase | 1.3E-21 | 37 | 293 |
| PF13472 | Lipase_GDSL_2 | GDSL-like Lipase/Acylhydrolase family | 1.1E-13 | 39 | 232 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9FD10|SSEJ_SALTY | Secreted effector protein SseJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=sseJ PE=1 SV=1 | 19 | 290 | 9.0E-16 |
| sp|Q99289|HLT_VIBPA | Thermolabile hemolysin OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0226 PE=1 SV=2 | 35 | 295 | 1.0E-15 |
| sp|P10480|GCAT_AERHY | Phosphatidylcholine-sterol acyltransferase OS=Aeromonas hydrophila PE=1 SV=3 | 35 | 263 | 1.0E-11 |
| sp|Q9FJ41|GDL85_ARATH | GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1 | 15 | 292 | 2.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016788 | hydrolase activity, acting on ester bonds | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2851 MAGLSLSRAAVATLSVLSLGAALPTRQEAALANASALVVFGDSYTDNGNAYALTNDTWPADPAYFQGRFSNGPVW SEQLAQQKSLTLHDYAYASATTSNRISKGTTGSNADIRVPSLDEQVERYLARLPAPASQSILVLWGGTNDPLFNS TIAPQASAQVMRGLVHRLKSVSPAGMLIIGIPDLSLLPYGYFIDAEEQDRLHAFSVEYNIELSRIAKQAGAKYVD VSSLLQSFEYYGKGWQGVGLDAFGFYGSCLEGAYMEAPKRKCEDPEKRVYWDEYHVTRRVHELFAEKIAEVL* |
| Coding | >OphauG2|2851 ATGGCTGGCCTTTCGCTATCTAGAGCCGCAGTGGCGACGCTGTCGGTCCTGTCACTTGGCGCAGCGCTGCCAACG CGACAAGAGGCTGCCCTGGCGAATGCTTCTGCCCTTGTCGTCTTTGGCGACTCATACACTGACAACGGCAACGCC TATGCCCTGACCAATGATACATGGCCTGCAGATCCGGCCTACTTCCAGGGCCGCTTCTCCAACGGGCCCGTATGG TCAGAACAGCTCGCCCAACAGAAATCGCTTACGCTCCATGACTATGCATACGCCAGCGCAACAACATCCAACCGC ATCAGCAAGGGCACCACGGGCTCCAACGCTGATATCCGCGTGCCGTCTCTCGACGAGCAGGTTGAGAGATATCTC GCCAGGCTGCCCGCGCCAGCATCACAGTCGATTCTCGTTCTCTGGGGCGGCACCAACGACCCGCTCTTCAACTCG ACCATTGCGCCGCAGGCCTCTGCCCAAGTCATGCGCGGGCTAGTCCATCGTTTAAAGAGCGTGAGCCCGGCGGGG ATGCTGATTATCGGGATTCCGGACTTGTCCTTGCTGCCATATGGCTATTTCATAGACGCCGAGGAGCAGGACAGG CTGCACGCTTTTTCGGTGGAGTATAACATCGAGCTGAGCAGGATAGCAAAGCAGGCGGGAGCAAAGTACGTCGAC GTGAGTTCGCTACTGCAGAGTTTCGAGTATTATGGAAAAGGATGGCAGGGCGTGGGGCTGGATGCGTTTGGGTTT TATGGGAGTTGTTTGGAGGGCGCGTATATGGAGGCGCCGAAGCGGAAGTGTGAGGATCCGGAGAAGAGGGTATAT TGGGATGAGTACCATGTTACGAGGAGGGTGCATGAGTTGTTTGCGGAGAAGATTGCAGAGGTCTTGTAG |
| Transcript | >OphauG2|2851 ATGGCTGGCCTTTCGCTATCTAGAGCCGCAGTGGCGACGCTGTCGGTCCTGTCACTTGGCGCAGCGCTGCCAACG CGACAAGAGGCTGCCCTGGCGAATGCTTCTGCCCTTGTCGTCTTTGGCGACTCATACACTGACAACGGCAACGCC TATGCCCTGACCAATGATACATGGCCTGCAGATCCGGCCTACTTCCAGGGCCGCTTCTCCAACGGGCCCGTATGG TCAGAACAGCTCGCCCAACAGAAATCGCTTACGCTCCATGACTATGCATACGCCAGCGCAACAACATCCAACCGC ATCAGCAAGGGCACCACGGGCTCCAACGCTGATATCCGCGTGCCGTCTCTCGACGAGCAGGTTGAGAGATATCTC GCCAGGCTGCCCGCGCCAGCATCACAGTCGATTCTCGTTCTCTGGGGCGGCACCAACGACCCGCTCTTCAACTCG ACCATTGCGCCGCAGGCCTCTGCCCAAGTCATGCGCGGGCTAGTCCATCGTTTAAAGAGCGTGAGCCCGGCGGGG ATGCTGATTATCGGGATTCCGGACTTGTCCTTGCTGCCATATGGCTATTTCATAGACGCCGAGGAGCAGGACAGG CTGCACGCTTTTTCGGTGGAGTATAACATCGAGCTGAGCAGGATAGCAAAGCAGGCGGGAGCAAAGTACGTCGAC GTGAGTTCGCTACTGCAGAGTTTCGAGTATTATGGAAAAGGATGGCAGGGCGTGGGGCTGGATGCGTTTGGGTTT TATGGGAGTTGTTTGGAGGGCGCGTATATGGAGGCGCCGAAGCGGAAGTGTGAGGATCCGGAGAAGAGGGTATAT TGGGATGAGTACCATGTTACGAGGAGGGTGCATGAGTTGTTTGCGGAGAAGATTGCAGAGGTCTTGTAG |
| Gene | >OphauG2|2851 ATGGCTGGCCTTTCGCTATCTAGAGCCGCAGTGGCGACGCTGTCGGTCCTGTCACTTGGCGCAGCGCTGCCAACG CGACAAGAGGCTGCCCTGGCGAATGCTTCTGCCCTTGTCGTCTTTGGCGACTCATACACTGACAACGGCAACGCC TATGCCCTGACCAATGATACATGGCCTGCAGATCCGGCCTACTTCCAGGGCCGCTTCTCCAACGGGCCCGTATGG TCAGAACAGCTCGCCCAACAGAAATCGCTTACGCTCCATGACTATGCATACGCCAGCGCAACAACATCCAACCGC ATCAGCAAGGGCACCACGGGCTCCAACGCTGATATCCGCGTGCCGTCTCTCGACGAGCAGGTTGAGAGATATCTC GCCAGGCTGCCCGCGCCAGCATCACAGTCGATTCTCGTTCTCTGGGGCGGCACCAACGACCCGCTCTTCAACTCG ACCATTGCGCCGCAGGCCTCTGCCCAAGTCATGCGCGGGCTAGTCCATCGTTTAAAGAGCGTGAGCCCGGCGGGG ATGCTGATTATCGGGATTCCGGACTTGTCCTTGCTGCCATATGGCTATTTCATAGACGCCGAGGAGCAGGACAGG CTGCACGCTTTTTCGGTGGAGTATAACATCGAGCTGAGCAGGATAGCAAAGCAGGCGGGAGCAAAGTACGTCGAC GTGAGTTCGCTACTGCAGAGTTTCGAGTATTATGGAAAAGGATGGCAGGGCGTGGGGCTGGATGCGTTTGGGTTT TATGGGAGTTGTTTGGAGGGCGCGTATATGGAGGCGCCGAAGCGGAAGTGTGAGGATCCGGAGAAGAGGGTATAT TGGGATGAGTACCATGTTACGAGGAGGGTGCATGAGTTGTTTGCGGAGAAGATTGCAGAGGTCTTGTAG |