© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2845 |
| Gene name | |
| Location | Contig_21:13137..14022 |
| Strand | + |
| Gene length (bp) | 885 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.0E-18 | 40 | 270 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 46 | 284 | 4.0E-06 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 69 | 219 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 110 | 132 | 22 |
| 2 | 147 | 169 | 22 |
| 3 | 174 | 196 | 22 |
| 4 | 238 | 260 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2845 MVILIDCAAYFMEGSQINLLEQAICKRHYSFPSTPRDCTISPVQAELTTINQMLYTFNRLPSLIMSLPMGILADR YGRRPVLLLALFGSLLQDAVAKLVLWRPSVLPPRLIWLSSLATLVGGGDAVASSMLFLVVADVAVAGQRARLFYM VTACGLVGEVVATPVSAWLMARNPWIPYFMYTALIIVGSIIPLFFLPETLSRGKFNASKAEEGQDERVFSKYTSS TMVSRLQPLLKPNILAVVFAFFVSALGAQLMSFLLQYIRQRFYWTYAKVSRLAQFKSCHFTNRITRLVS* |
| Coding | >OphauG2|2845 ATGGTCATCTTGATCGACTGCGCTGCCTATTTCATGGAAGGCTCTCAGATCAACCTCTTGGAACAAGCCATTTGC AAACGCCACTACTCCTTTCCCTCCACCCCGCGCGACTGCACCATCAGCCCCGTCCAAGCCGAACTCACCACCATT AACCAAATGCTCTACACATTCAACCGTCTCCCCAGCCTCATCATGTCTCTACCCATGGGTATTCTCGCCGACCGC TACGGCCGCCGCCCGGTACTCCTCCTCGCCCTCTTCGGCAGCCTCTTGCAAGACGCCGTGGCCAAGCTTGTCCTC TGGCGCCCCAGTGTCTTGCCACCCCGACTCATCTGGCTCTCGTCGCTCGCAACGCTAGTGGGCGGTGGCGACGCA GTCGCGAGCAGTATGCTTTTCCTCGTAGTGGCAGACGTGGCGGTGGCGGGGCAGCGGGCGAGGCTATTTTATATG GTGACCGCGTGTGGGCTGGTGGGAGAGGTTGTTGCGACACCGGTCAGCGCGTGGCTCATGGCGAGGAACCCATGG ATACCGTATTTCATGTATACGGCCTTGATCATAGTCGGAAGTATTATTCCGCTCTTCTTTTTGCCAGAGACGTTG TCCAGGGGGAAATTCAACGCTTCTAAAGCTGAAGAGGGCCAAGACGAACGAGTCTTTTCGAAATACACCTCTTCA ACCATGGTTTCGAGATTGCAGCCGCTTTTGAAGCCAAACATTCTGGCCGTCGTGTTTGCCTTTTTCGTCTCAGCT CTAGGAGCTCAGCTGATGAGTTTCCTCTTACAATACATCCGTCAACGCTTCTACTGGACGTACGCAAAAGTGAGT CGCTTGGCACAATTCAAATCTTGTCACTTTACCAACCGAATCACCAGGCTAGTCTCTTAA |
| Transcript | >OphauG2|2845 ATGGTCATCTTGATCGACTGCGCTGCCTATTTCATGGAAGGCTCTCAGATCAACCTCTTGGAACAAGCCATTTGC AAACGCCACTACTCCTTTCCCTCCACCCCGCGCGACTGCACCATCAGCCCCGTCCAAGCCGAACTCACCACCATT AACCAAATGCTCTACACATTCAACCGTCTCCCCAGCCTCATCATGTCTCTACCCATGGGTATTCTCGCCGACCGC TACGGCCGCCGCCCGGTACTCCTCCTCGCCCTCTTCGGCAGCCTCTTGCAAGACGCCGTGGCCAAGCTTGTCCTC TGGCGCCCCAGTGTCTTGCCACCCCGACTCATCTGGCTCTCGTCGCTCGCAACGCTAGTGGGCGGTGGCGACGCA GTCGCGAGCAGTATGCTTTTCCTCGTAGTGGCAGACGTGGCGGTGGCGGGGCAGCGGGCGAGGCTATTTTATATG GTGACCGCGTGTGGGCTGGTGGGAGAGGTTGTTGCGACACCGGTCAGCGCGTGGCTCATGGCGAGGAACCCATGG ATACCGTATTTCATGTATACGGCCTTGATCATAGTCGGAAGTATTATTCCGCTCTTCTTTTTGCCAGAGACGTTG TCCAGGGGGAAATTCAACGCTTCTAAAGCTGAAGAGGGCCAAGACGAACGAGTCTTTTCGAAATACACCTCTTCA ACCATGGTTTCGAGATTGCAGCCGCTTTTGAAGCCAAACATTCTGGCCGTCGTGTTTGCCTTTTTCGTCTCAGCT CTAGGAGCTCAGCTGATGAGTTTCCTCTTACAATACATCCGTCAACGCTTCTACTGGACGTACGCAAAAGTGAGT CGCTTGGCACAATTCAAATCTTGTCACTTTACCAACCGAATCACCAGGCTAGTCTCTTAA |
| Gene | >OphauG2|2845 ATGGTCATCTTGATCGACTGCGCTGCCTATTTCATGGAAGGCTCTCAGATCAACCTCTTGGAACAAGCCATTTGC AAACGCCACTACTCCTTTCCCTCCACCCCGCGCGACTGCACCATCAGCCCCGTCCAAGCCGAACTCACCACCATT AACCAAATGCTCTACACATTCAACCGTCTCCCCAGCCTCATCATGTCTCTACCCATGGGTATTCTCGCCGACCGC TACGGCCGCCGCCCGGTACTCCTCCTCGCCCTCTTCGGCAGCCTCTTGCAAGACGCCGTGGCCAAGCTTGTCCTC TGGCGCCCCAGTGTCTTGCCACCCCGACTCATCTGGCTCTCGTCGCTCGCAACGCTAGTGGGCGGTGGCGACGCA GTCGCGAGCAGTATGCTTTTCCTCGTAGTGGCAGACGTGGCGGTGGCGGGGCAGCGGGCGAGGCTATTTTATATG GTGACCGCGTGTGGGCTGGTGGGAGAGGTTGTTGCGACACCGGTCAGCGCGTGGCTCATGGCGAGGAACCCATGG ATACCGTATTTCATGTATACGGCCTTGATCATAGTCGGAAGTATTATTCCGCTCTTCTTTTTGCCAGAGACGTTG TCCAGGGGGAAATTCAACGCTTCTAAAGCTGAAGAGGGCCAAGACGAACGAGTCTTTTCGAAATACACCTCTTCA ACCATGGTTTCGAGATTGCAGCCGCTTTTGAAGCCAAACATTCTGGCCGTCGTGTTTGCCTTTTTCGTCTCAGCT CTAGGAGCTCAGCTGATGAGTTTCCTCTTACAATACATCCGTCAACGCTTCTACTGGACGTACGCAAAAGTGAGT CGCTTGGCACAATTCAAATCTTGTCACTTTACCAACCGAATCACCAGGCTAGTCTCTTAA |