Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2830
Gene name
LocationContig_209:3075..3751
Strand-
Gene length (bp)676
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10311 Ilm1 Increased loss of mitochondrial DNA protein 1 1.2E-62 5 165

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 59 78 19
3 93 110 17
4 131 153 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2830
MMPLITSKTLLTSISLFHMTLAFFFLTSPSTVNDQILVYILGESMGIPISRGFDAPSAPLALLAVVLAFLGLSDL
VSLSMPEELGSLYHWGTQAPLRSFITMVLVFYSYFQSARVPRGSSSAHDASLRGGNLTNRVVFTFAFLEMITWFW
IWVTLREERHGIIERMRKQGPGVRGQ*
Coding >OphauG2|2830
ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC
CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTCCCATTTCC
CGCGGCTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTG
GTCTCCCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATC
ACCATGGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCC
TCCCTGCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGG
ATCTGGGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGA
CAATGA
Transcript >OphauG2|2830
ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC
CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTCCCATTTCC
CGCGGCTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTG
GTCTCCCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATC
ACCATGGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCC
TCCCTGCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGG
ATCTGGGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGA
CAATGA
Gene >OphauG2|2830
ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC
CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTGTAAGTCAA
GCTGCTTGGCGTGCGCCTTGATCAGGCGTCCCAATTCCAAGCACGTCCCAAAGACGGGCTTGCTTGCACCAATGA
CTCTGCTACCAATAAGGACCCAGCACAAGAGGCACCGCAAAGGCTAACGTGTGCTGTGCAGCCCATTTCCCGCGG
CTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTGGTCTC
CCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATCACCAT
GGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCCTCCCT
GCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGGATCTG
GGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGACAATG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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