Protein ID | OphauG2|2830 |
Gene name | |
Location | Contig_209:3075..3751 |
Strand | - |
Gene length (bp) | 676 |
Transcript length (bp) | 531 |
Coding sequence length (bp) | 531 |
Protein length (aa) | 177 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10311 | Ilm1 | Increased loss of mitochondrial DNA protein 1 | 1.2E-62 | 5 | 165 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
2 | 59 | 78 | 19 |
3 | 93 | 110 | 17 |
4 | 131 | 153 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|2830 MMPLITSKTLLTSISLFHMTLAFFFLTSPSTVNDQILVYILGESMGIPISRGFDAPSAPLALLAVVLAFLGLSDL VSLSMPEELGSLYHWGTQAPLRSFITMVLVFYSYFQSARVPRGSSSAHDASLRGGNLTNRVVFTFAFLEMITWFW IWVTLREERHGIIERMRKQGPGVRGQ* |
Coding | >OphauG2|2830 ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTCCCATTTCC CGCGGCTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTG GTCTCCCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATC ACCATGGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCC TCCCTGCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGG ATCTGGGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGA CAATGA |
Transcript | >OphauG2|2830 ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTCCCATTTCC CGCGGCTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTG GTCTCCCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATC ACCATGGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCC TCCCTGCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGG ATCTGGGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGA CAATGA |
Gene | >OphauG2|2830 ATGATGCCGCTCATCACGTCCAAAACTCTTCTCACCTCTATTTCTCTCTTTCACATGACACTCGCCTTCTTCTTC CTCACAAGCCCGAGCACTGTCAACGATCAGATCCTCGTCTACATTCTCGGCGAAAGCATGGGCATTGTAAGTCAA GCTGCTTGGCGTGCGCCTTGATCAGGCGTCCCAATTCCAAGCACGTCCCAAAGACGGGCTTGCTTGCACCAATGA CTCTGCTACCAATAAGGACCCAGCACAAGAGGCACCGCAAAGGCTAACGTGTGCTGTGCAGCCCATTTCCCGCGG CTTCGATGCTCCCAGCGCGCCTCTGGCTCTTCTCGCCGTCGTTCTAGCCTTTCTTGGTCTCTCTGACCTGGTCTC CCTGTCCATGCCCGAGGAGCTCGGCTCGCTCTACCACTGGGGCACCCAGGCTCCTCTTCGCTCCTTCATCACCAT GGTTCTCGTCTTCTACTCGTATTTCCAGTCTGCTCGCGTTCCTCGCGGCTCCTCAAGCGCCCACGACGCCTCCCT GCGCGGCGGCAATCTTACAAATCGCGTCGTTTTCACCTTTGCCTTTTTAGAAATGATCACCTGGTTCTGGATCTG GGTCACGTTGCGCGAAGAACGGCACGGCATTATTGAGCGAATGCGCAAACAAGGCCCGGGTGTACGCGGACAATG A |