Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2812
Gene name
LocationContig_208:2953..3768
Strand+
Gene length (bp)815
Transcript length (bp)732
Coding sequence length (bp)732
Protein length (aa) 244

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05773 RWD RWD domain 1.7E-23 5 127
PF16543 DFRP_C DRG Family Regulatory Proteins, Tma46 1.5E-06 148 227

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 8 215 2.0E-23
sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 4 226 1.0E-21
sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 4 211 2.0E-17
sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 4 211 5.0E-17
sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 4 211 6.0E-17

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1930
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2812 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|7777
Ophiocordyceps camponoti-floridani Ophcf2|07356
Ophiocordyceps camponoti-rufipedis Ophun1|6571
Ophiocordyceps kimflemingae Ophio5|6656
Ophiocordyceps subramaniannii Hirsu2|2063

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2812
MGLQDQIEEREVLDSIFPDEITDISESEFRISVTLDVPGGEADNEAEPHDARQPPHFVLHVRYPQDYPDAPPHLD
MLAPPGAAPSPHGGYFSVADDREQLLLGLESTMEENLGMAMIFTLVSALKEAAEQLIMDRRAVTAAEIEESRLAA
EREENKKFHGTAVTPESFLKWREAFIKEMADKERKQEERLAELKRAKVKEPVKLTGRQLWERGLAGKGEDGDDDD
DDAPPVEGVQKLQVEASS*
Coding >OphauG2|2812
ATGGGGCTCCAGGATCAAATAGAAGAGCGCGAAGTCTTGGACTCCATCTTCCCTGACGAAATCACCGACATCTCC
GAGTCCGAGTTTCGGATAAGCGTAACGCTCGATGTGCCCGGCGGCGAAGCCGACAACGAGGCAGAGCCACATGAC
GCCCGGCAGCCGCCGCACTTTGTTCTTCACGTTCGCTATCCTCAAGATTATCCCGACGCTCCGCCGCACCTCGAC
ATGCTGGCACCTCCTGGTGCTGCGCCATCGCCACATGGCGGCTACTTCAGCGTTGCCGACGATCGGGAGCAGCTC
CTTCTAGGCCTCGAGTCTACCATGGAGGAAAACCTCGGCATGGCCATGATTTTCACCCTAGTCTCGGCCCTCAAG
GAGGCGGCGGAGCAGCTCATCATGGACCGCCGCGCTGTTACTGCCGCAGAAATCGAAGAGAGTCGGCTCGCTGCC
GAGCGCGAAGAGAACAAGAAATTCCACGGAACCGCCGTTACACCAGAAAGCTTCTTGAAGTGGCGAGAGGCCTTT
ATCAAGGAAATGGCGGACAAGGAGCGCAAGCAAGAAGAGCGCTTGGCCGAGCTCAAGCGTGCCAAAGTCAAGGAA
CCTGTCAAGCTCACGGGCAGGCAGCTTTGGGAACGGGGCCTGGCAGGCAAGGGCGAGGATGGAGATGATGACGAC
GACGACGCACCGCCTGTCGAGGGTGTCCAGAAACTGCAGGTCGAAGCAAGCTCTTGA
Transcript >OphauG2|2812
ATGGGGCTCCAGGATCAAATAGAAGAGCGCGAAGTCTTGGACTCCATCTTCCCTGACGAAATCACCGACATCTCC
GAGTCCGAGTTTCGGATAAGCGTAACGCTCGATGTGCCCGGCGGCGAAGCCGACAACGAGGCAGAGCCACATGAC
GCCCGGCAGCCGCCGCACTTTGTTCTTCACGTTCGCTATCCTCAAGATTATCCCGACGCTCCGCCGCACCTCGAC
ATGCTGGCACCTCCTGGTGCTGCGCCATCGCCACATGGCGGCTACTTCAGCGTTGCCGACGATCGGGAGCAGCTC
CTTCTAGGCCTCGAGTCTACCATGGAGGAAAACCTCGGCATGGCCATGATTTTCACCCTAGTCTCGGCCCTCAAG
GAGGCGGCGGAGCAGCTCATCATGGACCGCCGCGCTGTTACTGCCGCAGAAATCGAAGAGAGTCGGCTCGCTGCC
GAGCGCGAAGAGAACAAGAAATTCCACGGAACCGCCGTTACACCAGAAAGCTTCTTGAAGTGGCGAGAGGCCTTT
ATCAAGGAAATGGCGGACAAGGAGCGCAAGCAAGAAGAGCGCTTGGCCGAGCTCAAGCGTGCCAAAGTCAAGGAA
CCTGTCAAGCTCACGGGCAGGCAGCTTTGGGAACGGGGCCTGGCAGGCAAGGGCGAGGATGGAGATGATGACGAC
GACGACGCACCGCCTGTCGAGGGTGTCCAGAAACTGCAGGTCGAAGCAAGCTCTTGA
Gene >OphauG2|2812
ATGGGGCTCCAGGATCAAATAGAAGAGCGCGAAGTCTTGGACTCCATCTTCCCTGACGAAATCACCGGTACGTGT
AGCCGCGCCAGTGGAAGAAGCAGATACAGCAGCCGCCAACGATATCCAGGCTCAGATGTGTCTTGTGTGACGCAG
ACATCTCCGAGTCCGAGTTTCGGATAAGCGTAACGCTCGATGTGCCCGGCGGCGAAGCCGACAACGAGGCAGAGC
CACATGACGCCCGGCAGCCGCCGCACTTTGTTCTTCACGTTCGCTATCCTCAAGATTATCCCGACGCTCCGCCGC
ACCTCGACATGCTGGCACCTCCTGGTGCTGCGCCATCGCCACATGGCGGCTACTTCAGCGTTGCCGACGATCGGG
AGCAGCTCCTTCTAGGCCTCGAGTCTACCATGGAGGAAAACCTCGGCATGGCCATGATTTTCACCCTAGTCTCGG
CCCTCAAGGAGGCGGCGGAGCAGCTCATCATGGACCGCCGCGCTGTTACTGCCGCAGAAATCGAAGAGAGTCGGC
TCGCTGCCGAGCGCGAAGAGAACAAGAAATTCCACGGAACCGCCGTTACACCAGAAAGCTTCTTGAAGTGGCGAG
AGGCCTTTATCAAGGAAATGGCGGACAAGGAGCGCAAGCAAGAAGAGCGCTTGGCCGAGCTCAAGCGTGCCAAAG
TCAAGGAACCTGTCAAGCTCACGGGCAGGCAGCTTTGGGAACGGGGCCTGGCAGGCAAGGGCGAGGATGGAGATG
ATGACGACGACGACGCACCGCCTGTCGAGGGTGTCCAGAAACTGCAGGTCGAAGCAAGCTCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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