Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|2807
Gene name
Location	Contig_2072:408..1056
Strand	+
Gene length (bp)	648
Transcript length (bp)	576
Coding sequence length (bp)	576
Protein length (aa)	192

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02845	CUE	CUE domain	2.5E-06	49	86

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6BKU8\|CUE1_DEBHA	Coupling of ubiquitin conjugation to ER degradation protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CUE1 PE=3 SV=1	50	185	1.0E-07

GO

GO Term	Description	Terminal node
GO:0043130	ubiquitin binding	Yes
GO:0003674	molecular_function	No
GO:0005515	protein binding	No
GO:0005488	binding	No
GO:0032182	ubiquitin-like protein binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|2807 MSDDQISLPYLAAILIITGLILRYFFFSTSAAPRPRTSPETVMRSRELAVEHIQQMFPQADRRNILWELQRNGGN MQATSERILAGRLDTPPVTFQPAPPPGQAIAAGASAATGATTRQTDRLVQPDLITRYNLKEKLNEESEESGRTGK GWSSNRNERQDSLQRRRDGMILMARRKMEAKMAAEKVAEGS*
Coding	>OphauG2\|2807 ATGTCGGACGACCAGATTTCGCTGCCATATTTGGCGGCCATTCTCATCATCACCGGACTGATTCTGCGCTATTTT TTCTTCTCGACTTCCGCGGCCCCTCGACCTAGGACGTCACCGGAGACCGTCATGAGGTCACGCGAGTTGGCAGTC GAGCATATACAGCAGATGTTTCCGCAAGCCGATAGAAGAAACATTCTTTGGGAACTGCAGCGAAACGGTGGAAAT ATGCAGGCGACAAGCGAACGGATTCTAGCGGGGCGTCTGGATACTCCACCTGTTACGTTTCAGCCTGCACCGCCT CCAGGACAGGCAATAGCAGCAGGAGCAAGTGCTGCCACTGGAGCAACAACGAGACAGACAGACCGACTGGTGCAG CCCGACCTAATCACGCGTTACAATCTCAAGGAGAAGTTGAATGAAGAGTCAGAAGAGTCAGGTCGCACTGGCAAA GGCTGGAGCTCGAATCGCAATGAGAGGCAGGATTCGCTACAGCGGAGACGCGATGGCATGATTTTGATGGCACGT CGCAAAATGGAGGCCAAGATGGCTGCTGAAAAGGTGGCGGAAGGAAGCTGA
Transcript	>OphauG2\|2807 ATGTCGGACGACCAGATTTCGCTGCCATATTTGGCGGCCATTCTCATCATCACCGGACTGATTCTGCGCTATTTT TTCTTCTCGACTTCCGCGGCCCCTCGACCTAGGACGTCACCGGAGACCGTCATGAGGTCACGCGAGTTGGCAGTC GAGCATATACAGCAGATGTTTCCGCAAGCCGATAGAAGAAACATTCTTTGGGAACTGCAGCGAAACGGTGGAAAT ATGCAGGCGACAAGCGAACGGATTCTAGCGGGGCGTCTGGATACTCCACCTGTTACGTTTCAGCCTGCACCGCCT CCAGGACAGGCAATAGCAGCAGGAGCAAGTGCTGCCACTGGAGCAACAACGAGACAGACAGACCGACTGGTGCAG CCCGACCTAATCACGCGTTACAATCTCAAGGAGAAGTTGAATGAAGAGTCAGAAGAGTCAGGTCGCACTGGCAAA GGCTGGAGCTCGAATCGCAATGAGAGGCAGGATTCGCTACAGCGGAGACGCGATGGCATGATTTTGATGGCACGT CGCAAAATGGAGGCCAAGATGGCTGCTGAAAAGGTGGCGGAAGGAAGCTGA
Gene	>OphauG2\|2807 ATGTCGGACGACCAGATTTCGCTGCCATATTTGGCGGCCATTCTCATCATCACCGGACTGATTCTGCGCTATTTT TTCTTCTCGACTTCCGCGGCCCCTCGACCTAGGACGTCACCGGAGACCGTCATGAGGTCACGCGAGTTGGCAGTC GAGCATATACAGCAGATGTTTCCGCAAGCCGATAGAAGAAACATTCTTTGGGAACTGCAGCGAAACGGTGGAAAT ATGCAGGCGACAAGCGAACGGATTCTAGCGGGGCGTCTGGATACTGTACGTGGCCTTGCGCATGGATGTCTTGGC TGAGTGTGGTGTTTGTCTCGGACTGATGAGAGTCTTGCATAGCCACCTGTTACGTTTCAGCCTGCACCGCCTCCA GGACAGGCAATAGCAGCAGGAGCAAGTGCTGCCACTGGAGCAACAACGAGACAGACAGACCGACTGGTGCAGCCC GACCTAATCACGCGTTACAATCTCAAGGAGAAGTTGAATGAAGAGTCAGAAGAGTCAGGTCGCACTGGCAAAGGC TGGAGCTCGAATCGCAATGAGAGGCAGGATTCGCTACAGCGGAGACGCGATGGCATGATTTTGATGGCACGTCGC AAAATGGAGGCCAAGATGGCTGCTGAAAAGGTGGCGGAAGGAAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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