© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2796 |
| Gene name | |
| Location | Contig_2063:1..839 |
| Strand | - |
| Gene length (bp) | 838 |
| Transcript length (bp) | 708 |
| Coding sequence length (bp) | 708 |
| Protein length (aa) | 236 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 3.3E-19 | 44 | 189 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 7 | 234 | 8.0E-34 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 7 | 229 | 4.0E-29 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 80 | 220 | 5.0E-16 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 37 | 229 | 4.0E-14 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 81 | 229 | 4.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 7 | 234 | 8.0E-34 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 7 | 229 | 4.0E-29 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 80 | 220 | 5.0E-16 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 37 | 229 | 4.0E-14 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 81 | 229 | 4.0E-07 |
| sp|Q9FZC7|FOX4_ARATH | Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 | 82 | 211 | 7.0E-07 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 38 | 229 | 9.0E-07 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 23 | 233 | 1.0E-06 |
| sp|Q6Z955|CKX11_ORYSJ | Cytokinin dehydrogenase 11 OS=Oryza sativa subsp. japonica GN=CKX11 PE=2 SV=1 | 43 | 225 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2796 MKPAISCCALLAARLGNITVFPGSTEYNSSVSSYYSSQAAAVRPACIVLAQNAEHVSIALGRLASAPYAPGHDNQ TNCLFAIRSGGHAVAPSASNIEGGVTLDLRGLADVQIDETRTSVSVGVGNTWDAVYAKLQVANLSANGGRVAGVG VGGLTLGAGISYFGTRYGWTADAVSNYQVVLANGTIVNASRHRNPDLYWALKGGGNNFGVVTRIDLDTFDQGAFW GGLLTHPNNP* |
| Coding | >OphauG2|2796 ATGAAGCCAGCTATATCCTGTTGCGCGCTCCTGGCCGCTCGTCTGGGCAATATCACGGTGTTTCCTGGCAGCACG GAATACAACTCGTCGGTTTCTTCCTATTATTCCAGCCAAGCTGCCGCAGTTCGGCCTGCGTGTATAGTCTTGGCC CAGAATGCAGAACACGTGTCCATTGCACTTGGCCGCCTGGCTTCAGCCCCCTACGCTCCCGGCCATGACAACCAG ACAAACTGTCTCTTTGCAATCCGCTCCGGAGGCCACGCAGTCGCTCCCAGCGCTTCGAATATCGAGGGCGGTGTG ACGCTGGACCTGCGCGGCCTGGCTGATGTCCAGATCGACGAGACAAGAACAAGTGTTTCCGTCGGCGTGGGAAAC ACGTGGGATGCCGTCTACGCCAAGCTCCAAGTGGCCAATCTCAGCGCCAATGGCGGGCGCGTGGCGGGCGTGGGC GTGGGCGGCCTGACGCTGGGAGCCGGCATTTCCTACTTTGGCACGCGCTACGGCTGGACGGCCGATGCCGTGTCC AACTATCAAGTCGTGCTGGCAAACGGCACCATTGTCAATGCCAGCCGACACCGCAATCCAGATCTATACTGGGCT CTCAAGGGCGGCGGCAACAACTTTGGCGTCGTGACGAGAATCGACCTCGACACCTTTGACCAGGGCGCCTTTTGG GGCGGGCTGCTGACCCATCCCAACAATCCTTGA |
| Transcript | >OphauG2|2796 ATGAAGCCAGCTATATCCTGTTGCGCGCTCCTGGCCGCTCGTCTGGGCAATATCACGGTGTTTCCTGGCAGCACG GAATACAACTCGTCGGTTTCTTCCTATTATTCCAGCCAAGCTGCCGCAGTTCGGCCTGCGTGTATAGTCTTGGCC CAGAATGCAGAACACGTGTCCATTGCACTTGGCCGCCTGGCTTCAGCCCCCTACGCTCCCGGCCATGACAACCAG ACAAACTGTCTCTTTGCAATCCGCTCCGGAGGCCACGCAGTCGCTCCCAGCGCTTCGAATATCGAGGGCGGTGTG ACGCTGGACCTGCGCGGCCTGGCTGATGTCCAGATCGACGAGACAAGAACAAGTGTTTCCGTCGGCGTGGGAAAC ACGTGGGATGCCGTCTACGCCAAGCTCCAAGTGGCCAATCTCAGCGCCAATGGCGGGCGCGTGGCGGGCGTGGGC GTGGGCGGCCTGACGCTGGGAGCCGGCATTTCCTACTTTGGCACGCGCTACGGCTGGACGGCCGATGCCGTGTCC AACTATCAAGTCGTGCTGGCAAACGGCACCATTGTCAATGCCAGCCGACACCGCAATCCAGATCTATACTGGGCT CTCAAGGGCGGCGGCAACAACTTTGGCGTCGTGACGAGAATCGACCTCGACACCTTTGACCAGGGCGCCTTTTGG GGCGGGCTGCTGACCCATCCCAACAATCCTTGA |
| Gene | >OphauG2|2796 ATGAAGCCAGCTATATCCTGTGTCTGTATCATGATTTCCTTTGACGCGACAAGGCCAGCTTGGCATCTAACCTCG GCATCTTAGTGCGCGCTCCTGGCCGCTCGTCTGGGCAATATCACGGTGTTTCCTGGCAGCACGGAATACAACTCG TCGGTTTCTTCCTATTATTCCAGCCAAGCTGCCGCAGTTCGGCCTGCGTGTATAGTCTTGGCCCAGAATGCAGAA CACGTGTCCATTGCACTTGGCCGCCTGGCTTCAGCCCCCTACGCTCCCGGCCATGACAACCAGACAAACTGTCTC TTTGCAATCCGCTCCGGAGGCCACGCAGTCGCTCCCAGCGCTTCGAATATCGAGGGCGGTGTGACGCTGGACCTG CGCGGCCTGGCTGATGTCCAGATCGACGAGACAAGAACAAGTGTTTCCGTCGGCGTGGGAAACACGTGGGATGCC GTCTACGCCAAGCTCCAAGTGGCCAATCTCAGCGCCAATGGCGGGCGCGTGGCGGGCGTGGGCGTGGGCGGCCTG ACGCTGGGAGCCGGCATTTCCTACTTTGGCACGCGCTACGGCTGGACGGCCGATGCCGTGTCCAACTATCAAGTC GTGCTGGCAAACGGCACCATTGTCAATGCCAGCCGACACCGCAATCCAGATCTATACTGGGCTCTCAAGGGCGGC GGCAACAACTTTGGCGTCGTGACGAGAATCGACCTCGACACCTTTGACCAGGGCGCCTTTTGGGGCGGGCTGCTG ACCCATCCCAACAATGTGTCGCGCGAGGCCATTCGCGAGTTTGTCAAGATGAATTCTCCAGACTCGTATGACCCT TTTGCAGCCTTGA |