Protein ID | OphauG2|279 |
Gene name | |
Location | Contig_106:8906..11108 |
Strand | - |
Gene length (bp) | 2202 |
Transcript length (bp) | 1515 |
Coding sequence length (bp) | 1515 |
Protein length (aa) | 505 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14324 | PINIT | PINIT domain | 2.0E-41 | 145 | 279 |
PF02891 | zf-MIZ | MIZ/SP-RING zinc finger | 5.4E-21 | 321 | 369 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94451|PLI1_SCHPO | E3 SUMO-protein ligase pli1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pli1 PE=1 SV=3 | 32 | 484 | 8.0E-58 |
sp|Q12216|SIZ2_YEAST | E3 SUMO-protein ligase SIZ2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NFI1 PE=1 SV=1 | 32 | 404 | 3.0E-38 |
sp|Q04195|SIZ1_YEAST | E3 SUMO-protein ligase SIZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIZ1 PE=1 SV=1 | 143 | 404 | 1.0E-37 |
sp|O75928|PIAS2_HUMAN | E3 SUMO-protein ligase PIAS2 OS=Homo sapiens GN=PIAS2 PE=1 SV=3 | 201 | 501 | 4.0E-28 |
sp|Q6AZ28|PIAS2_RAT | E3 SUMO-protein ligase PIAS2 OS=Rattus norvegicus GN=Pias2 PE=1 SV=1 | 201 | 404 | 4.0E-28 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94451|PLI1_SCHPO | E3 SUMO-protein ligase pli1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pli1 PE=1 SV=3 | 32 | 484 | 8.0E-58 |
sp|Q12216|SIZ2_YEAST | E3 SUMO-protein ligase SIZ2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NFI1 PE=1 SV=1 | 32 | 404 | 3.0E-38 |
sp|Q04195|SIZ1_YEAST | E3 SUMO-protein ligase SIZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIZ1 PE=1 SV=1 | 143 | 404 | 1.0E-37 |
sp|O75928|PIAS2_HUMAN | E3 SUMO-protein ligase PIAS2 OS=Homo sapiens GN=PIAS2 PE=1 SV=3 | 201 | 501 | 4.0E-28 |
sp|Q6AZ28|PIAS2_RAT | E3 SUMO-protein ligase PIAS2 OS=Rattus norvegicus GN=Pias2 PE=1 SV=1 | 201 | 404 | 4.0E-28 |
sp|Q8C5D8|PIAS2_MOUSE | E3 SUMO-protein ligase PIAS2 OS=Mus musculus GN=Pias2 PE=1 SV=2 | 201 | 404 | 7.0E-28 |
sp|O70260|PIAS3_RAT | E3 SUMO-protein ligase PIAS3 OS=Rattus norvegicus GN=Pias3 PE=1 SV=2 | 196 | 494 | 2.0E-27 |
sp|O54714|PIAS3_MOUSE | E3 SUMO-protein ligase PIAS3 OS=Mus musculus GN=Pias3 PE=1 SV=3 | 196 | 494 | 2.0E-27 |
sp|Q9Y6X2|PIAS3_HUMAN | E3 SUMO-protein ligase PIAS3 OS=Homo sapiens GN=PIAS3 PE=1 SV=2 | 196 | 495 | 6.0E-27 |
sp|O75925|PIAS1_HUMAN | E3 SUMO-protein ligase PIAS1 OS=Homo sapiens GN=PIAS1 PE=1 SV=2 | 201 | 404 | 6.0E-27 |
sp|O88907|PIAS1_MOUSE | E3 SUMO-protein ligase PIAS1 OS=Mus musculus GN=Pias1 PE=1 SV=2 | 201 | 404 | 6.0E-27 |
sp|Q8N2W9|PIAS4_HUMAN | E3 SUMO-protein ligase PIAS4 OS=Homo sapiens GN=PIAS4 PE=1 SV=1 | 33 | 414 | 2.0E-26 |
sp|Q9JM05|PIAS4_MOUSE | E3 SUMO-protein ligase PIAS4 OS=Mus musculus GN=Pias4 PE=1 SV=2 | 198 | 404 | 2.0E-24 |
sp|A0A0A7EPL0|PIAL1_ARATH | E4 SUMO-protein ligase PIAL1 OS=Arabidopsis thaliana GN=PIAL1 PE=2 SV=1 | 304 | 442 | 6.0E-18 |
sp|Q8CIE2|ZMIZ2_MOUSE | Zinc finger MIZ domain-containing protein 2 OS=Mus musculus GN=Zmiz2 PE=2 SV=2 | 150 | 404 | 1.0E-17 |
sp|Q9ULJ6|ZMIZ1_HUMAN | Zinc finger MIZ domain-containing protein 1 OS=Homo sapiens GN=ZMIZ1 PE=1 SV=3 | 314 | 404 | 4.0E-17 |
sp|Q6P1E1|ZMIZ1_MOUSE | Zinc finger MIZ domain-containing protein 1 OS=Mus musculus GN=Zmiz1 PE=2 SV=1 | 314 | 404 | 4.0E-17 |
sp|Q8NF64|ZMIZ2_HUMAN | Zinc finger MIZ domain-containing protein 2 OS=Homo sapiens GN=ZMIZ2 PE=1 SV=2 | 314 | 404 | 5.0E-17 |
sp|Q94361|GEI17_CAEEL | E3 SUMO-protein ligase gei-17 OS=Caenorhabditis elegans GN=gei-17 PE=1 SV=4 | 241 | 488 | 7.0E-17 |
sp|F4JYG0|PIAL2_ARATH | E4 SUMO-protein ligase PIAL2 OS=Arabidopsis thaliana GN=PIAL2 PE=1 SV=1 | 286 | 426 | 6.0E-16 |
sp|Q6L4L4|SIZ1_ORYSJ | E3 SUMO-protein ligase SIZ1 OS=Oryza sativa subsp. japonica GN=SIZ1 PE=1 SV=1 | 185 | 463 | 6.0E-16 |
sp|Q6ASW7|SIZ2_ORYSJ | E3 SUMO-protein ligase SIZ2 OS=Oryza sativa subsp. japonica GN=SIZ2 PE=2 SV=1 | 185 | 404 | 3.0E-13 |
sp|Q680Q4|SIZ1_ARATH | E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 PE=1 SV=2 | 311 | 404 | 2.0E-12 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0046914 | transition metal ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Zinc finger, MIZ-type |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|279 MASPQPSSASLSRHEVAALVKQVQSSQFFNRQLSFICQVNGLKTTGVKAELQRRIVDLITEAVSAGDVPRLHQIR QSIINAAGQRSSPSSKNFVPADSSLNLSSSPLSAHLSHSVTSFGDRDSPYSQQGFSSRGMPWANDMTPLINFRPS PFFQPDPGFSVLRVCEAMSQHRNSLSITIRVGDHRALQKCLDDKSYRIMVFCAAESTGVQDVAFPHQAELKVNGD DIKANLRGLKNKPGSTRPVDITGALRLKPNYSNNVEFLYALTSKKFFLVVNLCKTTPVAELVAAISGGRKIPRAS VVNEINKKSQDADVVATSQVLSLKCPLSCMRLDVPCRGLACNHIQCFDATSYLQLQEQGPQWLCPICNKSASFDQ LAVDEYVRDILNNTPKDTETVTIEPDGRWWTRKYDGEQTYLSRDGEMDDDDFCEISSVSVNGRRTDNAKNLTPHS ANGPRGTGSTSAKRPAAAVIDLTGDSDEDSFAPSPKRHNVMTNGIRSSSSELGP* |
Coding | >OphauG2|279 ATGGCGTCGCCTCAACCTTCTTCCGCCTCTCTCTCTAGACACGAGGTGGCGGCCCTGGTCAAGCAGGTACAGAGC AGTCAGTTTTTTAACCGCCAGCTGTCCTTCATCTGTCAGGTGAACGGCCTAAAGACCACTGGGGTCAAGGCGGAG CTCCAGCGCCGCATAGTCGACCTCATCACCGAGGCAGTCAGCGCCGGCGACGTGCCACGGCTGCACCAAATAAGG CAGAGCATCATCAACGCGGCTGGACAACGGTCTAGTCCTTCATCAAAGAACTTTGTTCCTGCTGATAGCAGCCTC AATCTTTCAAGTTCTCCTCTGTCGGCACACTTGTCACATTCAGTCACTTCTTTTGGCGACCGCGATTCGCCTTAT TCCCAGCAAGGCTTTTCTTCGCGAGGCATGCCGTGGGCAAACGACATGACTCCACTTATTAATTTTCGTCCCAGC CCATTCTTTCAACCAGATCCTGGCTTCAGCGTTCTACGAGTCTGTGAAGCCATGAGTCAACACAGAAACTCGCTA TCAATAACAATTAGAGTGGGCGATCACCGGGCCCTCCAGAAGTGTCTCGACGACAAGTCGTACAGAATCATGGTA TTCTGCGCAGCAGAGTCTACCGGTGTCCAGGATGTGGCCTTTCCACACCAGGCTGAACTCAAGGTCAACGGCGAT GATATCAAGGCCAATCTGCGTGGCCTCAAGAACAAGCCCGGTTCGACCCGACCCGTCGACATTACCGGTGCCCTA CGACTGAAGCCAAATTACTCCAACAATGTCGAATTTTTATACGCTCTGACCTCCAAGAAATTTTTTCTTGTCGTG AACCTCTGCAAGACAACACCTGTTGCTGAATTGGTCGCCGCTATTTCCGGCGGTCGCAAGATCCCCAGGGCGTCA GTCGTTAATGAAATCAACAAGAAATCACAAGACGCAGATGTTGTCGCTACGTCTCAGGTCCTCTCACTCAAGTGT CCACTATCGTGCATGAGGCTGGATGTGCCATGCCGCGGGCTGGCATGCAATCATATCCAGTGTTTCGATGCAACC TCGTATCTACAGCTGCAGGAGCAGGGTCCTCAATGGCTCTGCCCCATTTGCAACAAGTCTGCTTCATTTGACCAG CTTGCGGTGGACGAATATGTCAGAGATATCCTTAATAACACGCCCAAAGATACTGAGACGGTGACAATTGAGCCC GACGGCCGTTGGTGGACAAGGAAATATGATGGCGAGCAAACATATCTCTCAAGAGACGGAGAAATGGATGACGAT GATTTTTGCGAGATATCCTCGGTCAGCGTTAATGGTCGCAGAACTGATAACGCAAAGAATTTGACGCCGCATTCA GCAAACGGGCCCCGCGGAACAGGATCTACCAGCGCCAAGCGGCCAGCCGCTGCCGTGATTGATTTGACTGGTGAC TCGGACGAGGACAGCTTTGCGCCGAGCCCCAAGCGGCATAATGTAATGACGAATGGGATACGCAGTAGCTCTTCT GAGCTGGGTCCTTGA |
Transcript | >OphauG2|279 ATGGCGTCGCCTCAACCTTCTTCCGCCTCTCTCTCTAGACACGAGGTGGCGGCCCTGGTCAAGCAGGTACAGAGC AGTCAGTTTTTTAACCGCCAGCTGTCCTTCATCTGTCAGGTGAACGGCCTAAAGACCACTGGGGTCAAGGCGGAG CTCCAGCGCCGCATAGTCGACCTCATCACCGAGGCAGTCAGCGCCGGCGACGTGCCACGGCTGCACCAAATAAGG CAGAGCATCATCAACGCGGCTGGACAACGGTCTAGTCCTTCATCAAAGAACTTTGTTCCTGCTGATAGCAGCCTC AATCTTTCAAGTTCTCCTCTGTCGGCACACTTGTCACATTCAGTCACTTCTTTTGGCGACCGCGATTCGCCTTAT TCCCAGCAAGGCTTTTCTTCGCGAGGCATGCCGTGGGCAAACGACATGACTCCACTTATTAATTTTCGTCCCAGC CCATTCTTTCAACCAGATCCTGGCTTCAGCGTTCTACGAGTCTGTGAAGCCATGAGTCAACACAGAAACTCGCTA TCAATAACAATTAGAGTGGGCGATCACCGGGCCCTCCAGAAGTGTCTCGACGACAAGTCGTACAGAATCATGGTA TTCTGCGCAGCAGAGTCTACCGGTGTCCAGGATGTGGCCTTTCCACACCAGGCTGAACTCAAGGTCAACGGCGAT GATATCAAGGCCAATCTGCGTGGCCTCAAGAACAAGCCCGGTTCGACCCGACCCGTCGACATTACCGGTGCCCTA CGACTGAAGCCAAATTACTCCAACAATGTCGAATTTTTATACGCTCTGACCTCCAAGAAATTTTTTCTTGTCGTG AACCTCTGCAAGACAACACCTGTTGCTGAATTGGTCGCCGCTATTTCCGGCGGTCGCAAGATCCCCAGGGCGTCA GTCGTTAATGAAATCAACAAGAAATCACAAGACGCAGATGTTGTCGCTACGTCTCAGGTCCTCTCACTCAAGTGT CCACTATCGTGCATGAGGCTGGATGTGCCATGCCGCGGGCTGGCATGCAATCATATCCAGTGTTTCGATGCAACC TCGTATCTACAGCTGCAGGAGCAGGGTCCTCAATGGCTCTGCCCCATTTGCAACAAGTCTGCTTCATTTGACCAG CTTGCGGTGGACGAATATGTCAGAGATATCCTTAATAACACGCCCAAAGATACTGAGACGGTGACAATTGAGCCC GACGGCCGTTGGTGGACAAGGAAATATGATGGCGAGCAAACATATCTCTCAAGAGACGGAGAAATGGATGACGAT GATTTTTGCGAGATATCCTCGGTCAGCGTTAATGGTCGCAGAACTGATAACGCAAAGAATTTGACGCCGCATTCA GCAAACGGGCCCCGCGGAACAGGATCTACCAGCGCCAAGCGGCCAGCCGCTGCCGTGATTGATTTGACTGGTGAC TCGGACGAGGACAGCTTTGCGCCGAGCCCCAAGCGGCATAATGTAATGACGAATGGGATACGCAGTAGCTCTTCT GAGCTGGGTCCTTGA |
Gene | >OphauG2|279 ATGGCGTCGCCTCAACCTTCTTCCGCCTCTCTCTCTAGACACGAGGTGGCGGCCCTGGTCAAGCAGGTACAGAGC AGTCAGTTTTTTAACCGCCAGCTGTCCTTCATCTGTCAGGTGAACGGCCTAAAGACCACTGGGGTCAAGGCGGAG CTCCAGCGCCGCATAGTCGACCGTGAGTAACGCACACCCTATCTTCCTTTCTCTGTACTCCCTCTCTCCCCATGC ATCTTCCTTTCTTCCTCACCTTACGTCAGCAACTACAATCCATCCCTCAGTCAACTTCTTGACAGCGCTTCTCGT GCGGTTTGCTGCCCGGACTCTCAGGCTTCACTTTGGGACCTCTGCTTCACTGCCTTGATTGATTCATATCCCCCA CAGCACTCGTCTCACTCAAGACACTTTTCTTGCCCTTTGCTGTCCAATTCATTCCTTTTCTGCTTCCACGACACT TCTTGTCTTGCTCAAACCTTCCAAAGGCGGGCCTCATTGTGAGACTCAACCACAGACACTTGACCCTCTGCTGGT CAGCCTTCACGTCTGCAGAAGCAATGCTTTCAGTACAAGCAGTGTGCACATGCTCACTCATTGATTGCAGTCATC ACCGAGGCAGTCAGCGCCGGCGACGTGCCACGGCTGCACCAAATAAGGCAGAGCATCATCAACGCGGCTGGACAA CGGTCTAGTCCTTCATCAAAGAACTTTGTTCCTGCTGATAGCAGCCTCAATCTTTCAAGTTCTCCTCTGTCGGCA CACTTGTCACATTCAGTCACTTCTTTTGGCGACCGCGATTCGCCTTATTCCCAGCAAGGCTTTTCTTCGCGAGGC ATGCCGTGGGCAAACGACATGACTCCACTTATTAATTTTCGTCCCAGCCCATTCTTTCAACCAGATCCTGGCTTC AGCGTTCTACGAGTCTGTGAAGGCATGTCACCAAATTGTTTGCATGGCCTGGTTGATCAAGACTTGGTTGACTAA CATTGTGCTACTGTATAGCCATGAGTCAACACAGAAACTCGCTATCAATAACAATTAGAGTGGGCGATCACCGGG CCCTCCAGAAGTGTCTCGACGACAAGTCGTACAGAATCATGGTATTCTGCGCAGCAGAGTCTACCGGTGTCCAGG ATGTGGCCTTTCCACACCAGGCTGAACTCAAGGTCAACGGCGATGATATCAAGGCCAATCTGCGTGGCCTCAAGA ACAAGCCCGGTTCGACCCGACCCGTCGACATTACCGGTGCCCTACGACTGAAGCCAAATTACTCCAACAATGTCG AATTTTTATACGCTCTGACCTCCAAGGTAGGCATCAGCCGCCAGAAAGTCGTTGGTCCCCTTGACAGCTTATTAC ACTTCACATTCATGGCTGACTGGATTTTGGGTAGAAATTTTTTCTTGTCGTGAACCTCTGCAAGACAACACCTGT TGCTGAATTGGTCGCCGCTATTTCCGGCGGTCGCAAGATCCCCAGGGCGTCAGTCGTTAATGAAAGCATGTTTCC CATGACTTTGCCGTGAGATGGTGCGTTTTGCTAATTGTGAACACCAGTCAACAAGAAATCACAAGACGCAGATGT TGTCGCTACGTCTCAGGTCCTCTCACTCAAGTGTCCACTATCGTGCATGAGGCTGGATGTGCCATGCCGCGGGCT GGCATGCAATCATATCCAGTGTTTCGATGCAACCTCGTATCTACAGCTGCAGGAGCAGGGTCCTCAATGGCTCTG CCCCATTTGCAACAAGTCTGCTTCATTTGACCAGCTTGCGGTGGACGAGTAGGTCATTCAAGGCGAGCCTTTGGT GGACTTGAATGCTGACAAGACTGCAGATATGTCAGAGATATCCTTAATAACACGCCCAAAGATACTGAGACGGTG ACAATTGAGCCCGACGGCCGTTGGTGGACAAGGAAATATGATGGCGAGCAAACATATCTCTCAAGAGACGGAGAA ATGGATGACGATGATTTTTGCGAGATATCCTCGGTCAGCGTTAATGGTCGCAGAACTGATAACGCAAAGAATTTG ACGCCGCATTCAGCAAACGGGCCCCGCGGAACAGGATCTACCAGCGCCAAGCGGCCAGCCGCTGCCGTGATTGAT TTGACTGGTGACTCGGACGAGGACAGCTTTGCGCCGAGCCCCAAGCGGCATAATGTAATGACGAATGGGATACGC AGTAGCTCTTCTGAGCTGGGTCCTTGA |