© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|275 |
| Gene name | |
| Location | Contig_106:3109..3496 |
| Strand | - |
| Gene length (bp) | 387 |
| Transcript length (bp) | 387 |
| Coding sequence length (bp) | 387 |
| Protein length (aa) | 129 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09435 | DUF2015 | Fungal protein of unknown function (DUF2015) | 4.7E-44 | 10 | 123 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q876Z1|YCB2_ASHGO | UPF0357 protein AAL017W OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AAL017W PE=3 SV=1 | 42 | 127 | 4.0E-21 |
| sp|Q8J0M6|YCB2_SACBA | UPF0357 protein YCL012C OS=Saccharomyces bayanus GN=YCL012C PE=3 SV=1 | 42 | 127 | 2.0E-18 |
| sp|Q8J0N0|YCB2_SACPA | UPF0357 protein YCL012C OS=Saccharomyces paradoxus GN=YCL012C PE=3 SV=1 | 44 | 127 | 5.0E-18 |
| sp|Q8J0M4|YCB2_YEAST | UPF0357 protein YCL012C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCL012C PE=1 SV=2 | 42 | 127 | 1.0E-17 |
| sp|O14068|YFF7_SCHPO | UPF0357 protein C1687.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.07 PE=3 SV=1 | 42 | 126 | 9.0E-14 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|275 MAYLLFSLSLLFVVGATVLFLTRTCWLPLIPDIYLPGAGFIYTRLPGSFSRDIEAGLSSSNFDLSANVDAGDGRA GLDDASKAEILRIMKKKRMTFDQARKAFMENRFKANGIGADGQPRDPKFVSFS* |
| Coding | >OphauG2|275 ATGGCTTATCTACTTTTCAGCCTCTCTCTCCTCTTTGTTGTCGGCGCCACCGTGCTCTTCTTAACGCGCACTTGC TGGCTGCCACTAATTCCCGACATTTACCTGCCTGGCGCAGGATTCATTTACACACGCCTACCTGGCAGCTTCAGT CGCGACATTGAGGCCGGCCTTTCCAGCAGCAACTTTGATTTAAGTGCCAATGTCGACGCTGGAGATGGTCGTGCA GGCCTTGATGACGCTAGCAAAGCCGAGATTTTGAGGATTATGAAGAAGAAGCGCATGACTTTTGATCAGGCCCGA AAAGCCTTTATGGAAAACCGTTTCAAGGCAAATGGTATTGGTGCTGACGGCCAACCTCGAGATCCTAAATTTGTC AGCTTCTCTTAA |
| Transcript | >OphauG2|275 ATGGCTTATCTACTTTTCAGCCTCTCTCTCCTCTTTGTTGTCGGCGCCACCGTGCTCTTCTTAACGCGCACTTGC TGGCTGCCACTAATTCCCGACATTTACCTGCCTGGCGCAGGATTCATTTACACACGCCTACCTGGCAGCTTCAGT CGCGACATTGAGGCCGGCCTTTCCAGCAGCAACTTTGATTTAAGTGCCAATGTCGACGCTGGAGATGGTCGTGCA GGCCTTGATGACGCTAGCAAAGCCGAGATTTTGAGGATTATGAAGAAGAAGCGCATGACTTTTGATCAGGCCCGA AAAGCCTTTATGGAAAACCGTTTCAAGGCAAATGGTATTGGTGCTGACGGCCAACCTCGAGATCCTAAATTTGTC AGCTTCTCTTAA |
| Gene | >OphauG2|275 ATGGCTTATCTACTTTTCAGCCTCTCTCTCCTCTTTGTTGTCGGCGCCACCGTGCTCTTCTTAACGCGCACTTGC TGGCTGCCACTAATTCCCGACATTTACCTGCCTGGCGCAGGATTCATTTACACACGCCTACCTGGCAGCTTCAGT CGCGACATTGAGGCCGGCCTTTCCAGCAGCAACTTTGATTTAAGTGCCAATGTCGACGCTGGAGATGGTCGTGCA GGCCTTGATGACGCTAGCAAAGCCGAGATTTTGAGGATTATGAAGAAGAAGCGCATGACTTTTGATCAGGCCCGA AAAGCCTTTATGGAAAACCGTTTCAAGGCAAATGGTATTGGTGCTGACGGCCAACCTCGAGATCCTAAATTTGTC AGCTTCTCTTAA |