Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|2717
Gene name
Location	Contig_201:22448..23197
Strand	-
Gene length (bp)	749
Transcript length (bp)	684
Coding sequence length (bp)	684
Protein length (aa)	228

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05241	EBP	EXPERA (EXPanded EBP superfamily)	7.1E-23	92	206

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P70245\|EBP_MOUSE	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3	2	206	2.0E-44
sp\|Q60490\|EBP_CAVPO	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3	2	219	2.0E-43
sp\|Q15125\|EBP_HUMAN	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3	2	206	3.0E-43
sp\|Q9JJ46\|EBP_RAT	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3	6	206	4.0E-42
sp\|Q9FTZ2\|EBP_ORYSJ	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1	8	222	2.0E-28

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P70245\|EBP_MOUSE	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3	2	206	2.0E-44
sp\|Q60490\|EBP_CAVPO	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3	2	219	2.0E-43
sp\|Q15125\|EBP_HUMAN	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3	2	206	3.0E-43
sp\|Q9JJ46\|EBP_RAT	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3	6	206	4.0E-42
sp\|Q9FTZ2\|EBP_ORYSJ	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1	8	222	2.0E-28
sp\|O48962\|EBP_ARATH	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1	8	202	2.0E-23
sp\|Q9D0P0\|EBPL_MOUSE	Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1	49	225	2.0E-19
sp\|Q9BY08\|EBPL_HUMAN	Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1	60	206	9.0E-16

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 66	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	27	49	22
2	62	84	22
3	115	137	22
4	144	166	22
5	194	216	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|2717 MASTTPVHPYYPLGVSIPNYKPNTLDTRIIIAAFITACSMILVPALIFLRRARSSLSTRDAATAMWFMLCGFIHV VVEGSFVLHHVADSSTILSQLWKEYSLSDSRYLTRDAFMVCMETITAFAWGPLSFLLVHFILDAHPARHFVQTVI SLGQMYGVVLYYAIFVHDNVVRGIEYSRPEKRYLYGYMVLANSFWLVIPALMLVQSGFATVAAFAGAAKRANKGR RG*
Coding	>OphauG2\|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTAT TCCCTGTCCGACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGG GGCCCGCTTTCGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATC AGCCTGGGCCAGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAG TATTCTCGGCCGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCG CTTATGCTTGTACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGA CGTGGATGA
Transcript	>OphauG2\|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTAT TCCCTGTCCGACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGG GGCCCGCTTTCGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATC AGCCTGGGCCAGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAG TATTCTCGGCCGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCG CTTATGCTTGTACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGA CGTGGATGA
Gene	>OphauG2\|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGTACGGCTTCTATTCGCCTTACCCCTTTCAACGTCGACAAATTTTTTTTGTTCATGTTGCTCTAG GCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTATTCCCTGTCCG ACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGGGGCCCGCTTT CGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATCAGCCTGGGCC AGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAGTATTCTCGGC CGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCGCTTATGCTTG TACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGACGTGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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