Protein ID | OphauG2|2717 |
Gene name | |
Location | Contig_201:22448..23197 |
Strand | - |
Gene length (bp) | 749 |
Transcript length (bp) | 684 |
Coding sequence length (bp) | 684 |
Protein length (aa) | 228 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 7.1E-23 | 92 | 206 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P70245|EBP_MOUSE | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 | 2 | 206 | 2.0E-44 |
sp|Q60490|EBP_CAVPO | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 | 2 | 219 | 2.0E-43 |
sp|Q15125|EBP_HUMAN | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 | 2 | 206 | 3.0E-43 |
sp|Q9JJ46|EBP_RAT | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 | 6 | 206 | 4.0E-42 |
sp|Q9FTZ2|EBP_ORYSJ | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 | 8 | 222 | 2.0E-28 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P70245|EBP_MOUSE | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 | 2 | 206 | 2.0E-44 |
sp|Q60490|EBP_CAVPO | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 | 2 | 219 | 2.0E-43 |
sp|Q15125|EBP_HUMAN | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 | 2 | 206 | 3.0E-43 |
sp|Q9JJ46|EBP_RAT | 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 | 6 | 206 | 4.0E-42 |
sp|Q9FTZ2|EBP_ORYSJ | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 | 8 | 222 | 2.0E-28 |
sp|O48962|EBP_ARATH | Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 | 8 | 202 | 2.0E-23 |
sp|Q9D0P0|EBPL_MOUSE | Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 | 49 | 225 | 2.0E-19 |
sp|Q9BY08|EBPL_HUMAN | Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 | 60 | 206 | 9.0E-16 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 66 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 27 | 49 | 22 |
2 | 62 | 84 | 22 |
3 | 115 | 137 | 22 |
4 | 144 | 166 | 22 |
5 | 194 | 216 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|2717 MASTTPVHPYYPLGVSIPNYKPNTLDTRIIIAAFITACSMILVPALIFLRRARSSLSTRDAATAMWFMLCGFIHV VVEGSFVLHHVADSSTILSQLWKEYSLSDSRYLTRDAFMVCMETITAFAWGPLSFLLVHFILDAHPARHFVQTVI SLGQMYGVVLYYAIFVHDNVVRGIEYSRPEKRYLYGYMVLANSFWLVIPALMLVQSGFATVAAFAGAAKRANKGR RG* |
Coding | >OphauG2|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTAT TCCCTGTCCGACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGG GGCCCGCTTTCGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATC AGCCTGGGCCAGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAG TATTCTCGGCCGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCG CTTATGCTTGTACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGA CGTGGATGA |
Transcript | >OphauG2|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTAT TCCCTGTCCGACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGG GGCCCGCTTTCGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATC AGCCTGGGCCAGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAG TATTCTCGGCCGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCG CTTATGCTTGTACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGA CGTGGATGA |
Gene | >OphauG2|2717 ATGGCCAGCACCACGCCCGTGCACCCATACTACCCTCTAGGAGTCTCGATCCCAAACTACAAGCCCAATACCCTC GATACAAGAATCATTATAGCAGCCTTTATTACCGCTTGCTCAATGATCCTAGTCCCAGCATTGATATTCCTTCGA CGCGCTCGATCGAGCCTCTCTACTCGCGACGCAGCCACGGCCATGTGGTTTATGCTATGTGGCTTCATCCACGTC GTTGTCGAAGGTACGGCTTCTATTCGCCTTACCCCTTTCAACGTCGACAAATTTTTTTTGTTCATGTTGCTCTAG GCAGCTTTGTTCTCCATCACGTCGCAGACAGTTCCACCATTCTTTCCCAGCTCTGGAAAGAGTATTCCCTGTCCG ACTCGCGGTACTTGACTCGAGACGCATTTATGGTTTGTATGGAGACCATTACCGCCTTTGCTTGGGGCCCGCTTT CGTTTCTCCTCGTCCATTTCATTCTAGACGCCCACCCAGCTCGACACTTTGTGCAGACAGTCATCAGCCTGGGCC AGATGTACGGTGTGGTCTTGTACTATGCTATATTTGTTCACGACAATGTGGTGCGCGGAATCGAGTATTCTCGGC CGGAAAAGCGTTATCTATACGGGTACATGGTTCTTGCCAACTCGTTTTGGCTCGTCATTCCTGCGCTTATGCTTG TACAATCAGGCTTTGCCACAGTGGCGGCTTTTGCTGGGGCGGCCAAAAGGGCAAACAAGGGTCGACGTGGATGA |