© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2700 |
| Gene name | |
| Location | Contig_200:19077..19521 |
| Strand | + |
| Gene length (bp) | 444 |
| Transcript length (bp) | 342 |
| Coding sequence length (bp) | 342 |
| Protein length (aa) | 114 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11779 | SPT_ssu-like | Small subunit of serine palmitoyltransferase-like | 5.7E-22 | 9 | 59 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2700 MALLAGLRRWLHRKQYLFEVTFGVYMYTPWEKFAVYSILFLLCGLAFIAAILYLPHHIFILVGRAWYYIKGDDID VAASARHVVKEITASVLSEARPTAARVSEALGVVDKEL* |
| Coding | >OphauG2|2700 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTCGAGGTTACATTTGGCGTCTAC ATGTACACGCCCTGGGAAAAGTTTGCCGTCTATTCCATTCTCTTTCTTCTATGTGGGCTGGCATTCATTGCTGCG ATTCTCTACCTGCCGCACCACATCTTTATCCTCGTCGGCCGTGCGTGGTACTACATCAAGGGCGACGACATTGAC GTGGCGGCATCGGCGCGGCACGTAGTCAAGGAAATCACGGCAAGCGTGCTCAGCGAGGCGCGGCCCACGGCGGCG CGTGTCAGCGAGGCGCTGGGCGTTGTGGACAAGGAGCTTTGA |
| Transcript | >OphauG2|2700 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTCGAGGTTACATTTGGCGTCTAC ATGTACACGCCCTGGGAAAAGTTTGCCGTCTATTCCATTCTCTTTCTTCTATGTGGGCTGGCATTCATTGCTGCG ATTCTCTACCTGCCGCACCACATCTTTATCCTCGTCGGCCGTGCGTGGTACTACATCAAGGGCGACGACATTGAC GTGGCGGCATCGGCGCGGCACGTAGTCAAGGAAATCACGGCAAGCGTGCTCAGCGAGGCGCGGCCCACGGCGGCG CGTGTCAGCGAGGCGCTGGGCGTTGTGGACAAGGAGCTTTGA |
| Gene | >OphauG2|2700 ATGGCGCTGCTGGCGGGCTTGAGGAGATGGCTGCACCGCAAGCAGTACCTGTTCGAGGTTACATTTGGCGTCTAC ATGTACACGCCCTGGGAAAAGTTTGCCGTCTGTGAGTCTTTGAGAATTGCTTGGCTTTGGAAAAGCAACTTGGAG AGAGGGGCGGGAGAGAGGGCGGGAGAAAGAGACTAACTGGCGATGCTCTTTTCACCAGATTCCATTCTCTTTCTT CTATGTGGGCTGGCATTCATTGCTGCGATTCTCTACCTGCCGCACCACATCTTTATCCTCGTCGGCCGTGCGTGG TACTACATCAAGGGCGACGACATTGACGTGGCGGCATCGGCGCGGCACGTAGTCAAGGAAATCACGGCAAGCGTG CTCAGCGAGGCGCGGCCCACGGCGGCGCGTGTCAGCGAGGCGCTGGGCGTTGTGGACAAGGAGCTTTGA |