© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2692 |
| Gene name | |
| Location | Contig_20:53272..54327 |
| Strand | - |
| Gene length (bp) | 1055 |
| Transcript length (bp) | 975 |
| Coding sequence length (bp) | 975 |
| Protein length (aa) | 325 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10261 | Scs3p | Inositol phospholipid synthesis and fat-storage-inducing TM | 6.1E-72 | 83 | 306 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HGM4|SCS3_SCHPO | FIT family protein scs3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scs3 PE=3 SV=1 | 78 | 319 | 2.0E-28 |
| sp|Q9VRJ2|FITM_DROME | FIT family protein CG10671 OS=Drosophila melanogaster GN=CG10671 PE=1 SV=1 | 84 | 311 | 2.0E-11 |
| sp|B2LYG4|FITM2_PIG | Fat storage-inducing transmembrane protein 2 OS=Sus scrofa GN=FITM2 PE=2 SV=1 | 81 | 306 | 9.0E-10 |
| sp|Q52KL1|FITM2_DANRE | Fat storage-inducing transmembrane protein 2 OS=Danio rerio GN=fitm2 PE=2 SV=1 | 77 | 308 | 2.0E-09 |
| sp|P59266|FITM2_MOUSE | Fat storage-inducing transmembrane protein 2 OS=Mus musculus GN=Fitm2 PE=1 SV=1 | 81 | 306 | 2.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9HGM4|SCS3_SCHPO | FIT family protein scs3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=scs3 PE=3 SV=1 | 78 | 319 | 2.0E-28 |
| sp|Q9VRJ2|FITM_DROME | FIT family protein CG10671 OS=Drosophila melanogaster GN=CG10671 PE=1 SV=1 | 84 | 311 | 2.0E-11 |
| sp|B2LYG4|FITM2_PIG | Fat storage-inducing transmembrane protein 2 OS=Sus scrofa GN=FITM2 PE=2 SV=1 | 81 | 306 | 9.0E-10 |
| sp|Q52KL1|FITM2_DANRE | Fat storage-inducing transmembrane protein 2 OS=Danio rerio GN=fitm2 PE=2 SV=1 | 77 | 308 | 2.0E-09 |
| sp|P59266|FITM2_MOUSE | Fat storage-inducing transmembrane protein 2 OS=Mus musculus GN=Fitm2 PE=1 SV=1 | 81 | 306 | 2.0E-09 |
| sp|A0JP80|FITM2_XENTR | Fat storage-inducing transmembrane protein 2 OS=Xenopus tropicalis GN=fitm2 PE=2 SV=1 | 84 | 306 | 3.0E-09 |
| sp|A4IFN5|FITM2_BOVIN | Fat storage-inducing transmembrane protein 2 OS=Bos taurus GN=FITM2 PE=2 SV=1 | 81 | 306 | 4.0E-09 |
| sp|Q8N6M3|FITM2_HUMAN | Fat storage-inducing transmembrane protein 2 OS=Homo sapiens GN=FITM2 PE=2 SV=1 | 81 | 306 | 5.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0019915 | lipid storage | Yes |
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0051179 | localization | No |
| GO:0051235 | maintenance of location | No |
| GO:0008150 | biological_process | No |
| GO:0016020 | membrane | No |
| GO:0031090 | organelle membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 60 | 22 |
| 2 | 101 | 120 | 19 |
| 3 | 127 | 149 | 22 |
| 4 | 200 | 222 | 22 |
| 5 | 266 | 288 | 22 |
| 6 | 292 | 314 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2692 MATQYTGGSHNAIDHGPKTASDLATPRSRNPPYFPTRLERLVTAIFPILLVFGTLFSAISPQTRGAIYDPSQQAH AQDAALVPSYFARKSNLFNVVFVKRGWAWTTLALLVFTVSHPSVASRSRVGLRWAAMTVCWILVTQWCFGAPVID RSFRWTGGRCDMAEREISRDGSADAGMADVLTAMACRTAGGHWKGGHDISGHVFLLVLGTAMLLQEVGWPLLRWT GITEERTIVMSDGAVKGAGVEADTAPGRGRGKFKLGVGGKTALAVGSLNVWMLLMTAIYFHTWVEKLTGLLTALV AVYAVYIVPRFMPVIRAVLALPGI* |
| Coding | >OphauG2|2692 ATGGCCACTCAGTACACAGGCGGCTCGCATAACGCCATTGACCATGGTCCCAAGACAGCATCCGATTTAGCGACA CCTCGTTCGCGAAACCCTCCCTACTTTCCAACGCGACTGGAACGCCTCGTGACAGCTATTTTTCCAATTTTGCTC GTCTTTGGAACCCTATTTTCCGCCATCTCCCCGCAGACCCGCGGTGCAATTTACGACCCAAGCCAACAGGCCCAC GCGCAGGACGCAGCCCTAGTTCCAAGCTACTTTGCCCGCAAATCCAACCTCTTCAACGTTGTGTTTGTCAAACGC GGCTGGGCTTGGACCACCTTGGCGCTCCTCGTTTTTACCGTGTCACATCCCAGCGTGGCATCGCGGTCACGCGTG GGTCTACGCTGGGCTGCCATGACGGTATGCTGGATCCTGGTGACCCAGTGGTGCTTTGGCGCTCCAGTAATTGAT CGCAGCTTTCGGTGGACTGGTGGACGATGCGACATGGCGGAGAGGGAAATTTCTCGCGACGGTTCAGCAGACGCC GGCATGGCGGATGTACTCACCGCTATGGCATGTAGGACAGCCGGCGGCCACTGGAAAGGCGGCCATGACATTTCG GGTCATGTCTTTTTGCTTGTTCTAGGCACGGCGATGCTTTTGCAGGAGGTAGGATGGCCGCTGCTGAGATGGACA GGTATCACCGAAGAACGAACCATTGTCATGTCCGACGGGGCTGTCAAGGGCGCAGGCGTTGAGGCAGATACGGCC CCTGGACGTGGCCGCGGCAAATTTAAGCTTGGCGTCGGCGGCAAAACGGCTCTCGCCGTGGGGTCGCTCAATGTG TGGATGCTCCTCATGACAGCTATTTACTTTCACACGTGGGTTGAAAAGCTCACGGGGCTCTTAACGGCCTTGGTG GCGGTATATGCCGTTTACATTGTGCCGCGCTTTATGCCCGTCATTAGAGCTGTCTTGGCCCTGCCTGGGATATAA |
| Transcript | >OphauG2|2692 ATGGCCACTCAGTACACAGGCGGCTCGCATAACGCCATTGACCATGGTCCCAAGACAGCATCCGATTTAGCGACA CCTCGTTCGCGAAACCCTCCCTACTTTCCAACGCGACTGGAACGCCTCGTGACAGCTATTTTTCCAATTTTGCTC GTCTTTGGAACCCTATTTTCCGCCATCTCCCCGCAGACCCGCGGTGCAATTTACGACCCAAGCCAACAGGCCCAC GCGCAGGACGCAGCCCTAGTTCCAAGCTACTTTGCCCGCAAATCCAACCTCTTCAACGTTGTGTTTGTCAAACGC GGCTGGGCTTGGACCACCTTGGCGCTCCTCGTTTTTACCGTGTCACATCCCAGCGTGGCATCGCGGTCACGCGTG GGTCTACGCTGGGCTGCCATGACGGTATGCTGGATCCTGGTGACCCAGTGGTGCTTTGGCGCTCCAGTAATTGAT CGCAGCTTTCGGTGGACTGGTGGACGATGCGACATGGCGGAGAGGGAAATTTCTCGCGACGGTTCAGCAGACGCC GGCATGGCGGATGTACTCACCGCTATGGCATGTAGGACAGCCGGCGGCCACTGGAAAGGCGGCCATGACATTTCG GGTCATGTCTTTTTGCTTGTTCTAGGCACGGCGATGCTTTTGCAGGAGGTAGGATGGCCGCTGCTGAGATGGACA GGTATCACCGAAGAACGAACCATTGTCATGTCCGACGGGGCTGTCAAGGGCGCAGGCGTTGAGGCAGATACGGCC CCTGGACGTGGCCGCGGCAAATTTAAGCTTGGCGTCGGCGGCAAAACGGCTCTCGCCGTGGGGTCGCTCAATGTG TGGATGCTCCTCATGACAGCTATTTACTTTCACACGTGGGTTGAAAAGCTCACGGGGCTCTTAACGGCCTTGGTG GCGGTATATGCCGTTTACATTGTGCCGCGCTTTATGCCCGTCATTAGAGCTGTCTTGGCCCTGCCTGGGATATAA |
| Gene | >OphauG2|2692 ATGGCCACTCAGTACACAGGCGGCTCGCATAACGCCATTGACCATGGTCCCAAGACAGCATCCGATTTAGCGACA CCTCGTTCGCGAAACCCTCCCTACTTTCCAACGCGACTGGAACGCCTCGTGACAGCTATTTTTCCAATTTTGCTC GTCTTTGGAACCCTATTTTCCGCCATCTCCCCGCAGACCCGCGGTGCAATTTACGACCCAAGCCAACAGGCCCAC GCGCAGGACGCAGCCCTAGTTCCAAGCTACTTTGCCCGCAAATCCAACCTCTTCAACGTTGTGTTTGTCAAACGC GGCTGGGCTTGGACCACCTTGGCGCTCCTCGTTTTTACCGTGTCACATCCCAGCGTGGCATCGCGGTCACGCGTG GGTCTACGCTGGGCTGCCATGACGGTATGCTGGATCCTGGTGACCCAGTGGTGCTTTGGCGCTCCAGTAATTGAT CGCAGCTTTCGGTGGACTGGTGGACGATGCGACATGGCGGAGAGGGAAATTTCTCGCGACGGTTCAGCAGACGCC GGCATGGCGGATGTACTCACCGCTATGGCATGTAGGACAGCCGGCGGCCACTGGAAAGGCGGCCATGACATTTCG GGTCATGTCTTTTTGCTTGTTCTAGGCACGGCGATGCTTTTGCAGGAGGTAGGATGGCCGCTGCTGAGATGGACA GGTATCACCGAAGAACGAACCATTGTCATGTCCGACGGGGCTGTCAAGGGCGCAGGCGTTGAGGCAGATACGGCC CCTGGACGTGGCCGCGGCAAATTTAAGCTTGGCGTCGGCGGCAAAACGGCTCTCGCCGTGGGGTCGCTCAATGTG TGGATGCTCCTCATGACAGCTATTTACTTTCACACGTGGGTTGAAAAGGTTAGTTTGGTCGCTCCTTATGGACCA GTCGCATTCCCCGGACTGCCAATGTCTCTGTCTTTAGTTAACATGGTTTTTAGCTCACGGGGCTCTTAACGGCCT TGGTGGCGGTATATGCCGTTTACATTGTGCCGCGCTTTATGCCCGTCATTAGAGCTGTCTTGGCCCTGCCTGGGA TATAA |