© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2689 |
| Gene name | |
| Location | Contig_20:43141..44406 |
| Strand | + |
| Gene length (bp) | 1265 |
| Transcript length (bp) | 996 |
| Coding sequence length (bp) | 996 |
| Protein length (aa) | 332 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02157 | Man-6-P_recep | Mannose-6-phosphate receptor | 9.7E-15 | 174 | 303 |
| PF09451 | ATG27 | Autophagy-related protein 27 | 2.0E-10 | 150 | 284 |
| PF00878 | CIMR | Cation-independent mannose-6-phosphate receptor repeat | 5.2E-05 | 176 | 224 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59745|YN29_SCHPO | Putative mannose 6-phosphate receptor-like protein C530.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.09c PE=3 SV=1 | 33 | 326 | 3.0E-37 |
| sp|Q75BD5|MRL1_ASHGO | Mannose 6-phosphate receptor-like protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRL1 PE=3 SV=1 | 33 | 326 | 3.0E-10 |
| sp|P24668|MPRD_MOUSE | Cation-dependent mannose-6-phosphate receptor OS=Mus musculus GN=M6pr PE=1 SV=1 | 206 | 297 | 3.0E-09 |
| sp|Q6AY20|MPRD_RAT | Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus GN=M6pr PE=1 SV=1 | 206 | 297 | 3.0E-09 |
| sp|P11456|MPRD_BOVIN | Cation-dependent mannose-6-phosphate receptor OS=Bos taurus GN=M6PR PE=1 SV=1 | 206 | 297 | 5.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59745|YN29_SCHPO | Putative mannose 6-phosphate receptor-like protein C530.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.09c PE=3 SV=1 | 33 | 326 | 3.0E-37 |
| sp|Q75BD5|MRL1_ASHGO | Mannose 6-phosphate receptor-like protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRL1 PE=3 SV=1 | 33 | 326 | 3.0E-10 |
| sp|P24668|MPRD_MOUSE | Cation-dependent mannose-6-phosphate receptor OS=Mus musculus GN=M6pr PE=1 SV=1 | 206 | 297 | 3.0E-09 |
| sp|Q6AY20|MPRD_RAT | Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus GN=M6pr PE=1 SV=1 | 206 | 297 | 3.0E-09 |
| sp|P11456|MPRD_BOVIN | Cation-dependent mannose-6-phosphate receptor OS=Bos taurus GN=M6PR PE=1 SV=1 | 206 | 297 | 5.0E-09 |
| sp|Q06815|MRL1_YEAST | Mannose 6-phosphate receptor-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRL1 PE=1 SV=1 | 37 | 219 | 7.0E-09 |
| sp|P20645|MPRD_HUMAN | Cation-dependent mannose-6-phosphate receptor OS=Homo sapiens GN=M6PR PE=1 SV=1 | 206 | 297 | 2.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0038023 | signaling receptor activity | Yes |
| GO:0005537 | mannose binding | Yes |
| GO:0007041 | lysosomal transport | Yes |
| GO:0005488 | binding | No |
| GO:0048029 | monosaccharide binding | No |
| GO:0007034 | vacuolar transport | No |
| GO:0046907 | intracellular transport | No |
| GO:0030246 | carbohydrate binding | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0036094 | small molecule binding | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0051641 | cellular localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 233 | 255 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2689 MRWSVSAVLLAAAIAVPADAVDNEATGTTTSAPACTATSSSGSGAFFDLRPDQATHADPKGKAHKTAVAKDYHAK GHDYGKNFTMNICGSVVDAVSDVVGVQKSDWANVSAYYMSRGSIYSIGSESMDLRSRGRKLVLQYTGGSPCDSAK SAKNRRSAPSDQDHGLRARDDTASVRRKSTTISFLCDRDPSNSQASISFVGTDPDECAYFFEARSVHACAHAEPH KPGSVGPGSVFGIILLIAVLVYALGGVFYNRTVTNARGWRQLPNYSIWAGIWNLISETCIIIWDYATRCLPRRRG YSYLNSTASNRNRSSEAENRLIDQLDEEWDD* |
| Coding | >OphauG2|2689 ATGCGCTGGTCCGTCTCTGCCGTGCTGCTTGCTGCTGCAATTGCCGTTCCAGCCGATGCAGTCGACAATGAAGCA ACTGGGACGACAACTTCAGCCCCGGCTTGCACGGCTACGTCGTCGTCGGGCAGTGGAGCCTTTTTCGATCTCCGA CCCGATCAAGCAACCCATGCTGACCCCAAAGGCAAGGCGCACAAGACGGCTGTCGCCAAGGACTATCATGCAAAG GGCCACGATTATGGCAAGAATTTCACCATGAATATCTGTGGCTCCGTTGTCGACGCCGTCAGTGATGTTGTTGGT GTCCAAAAGAGCGACTGGGCCAACGTCAGCGCCTACTACATGTCTCGCGGCAGCATCTACTCCATAGGATCCGAG TCAATGGACCTACGCAGTCGCGGACGCAAGCTTGTCCTGCAGTACACTGGTGGCTCGCCCTGCGACTCGGCCAAG TCTGCCAAGAATCGAAGAAGCGCCCCGTCAGATCAAGACCATGGACTAAGAGCAAGAGACGACACCGCATCGGTC CGACGCAAGTCCACCACCATCTCCTTTCTCTGCGACCGCGACCCTAGCAACTCGCAGGCCAGCATTTCGTTTGTT GGCACCGACCCCGACGAGTGCGCATACTTCTTCGAGGCCCGTTCGGTGCACGCGTGCGCCCATGCGGAGCCGCAC AAGCCTGGCAGTGTTGGCCCGGGTAGCGTCTTTGGCATTATCCTGCTCATTGCGGTTCTCGTCTACGCCCTGGGT GGTGTCTTTTACAACCGCACCGTCACCAACGCCCGCGGCTGGCGTCAGCTGCCCAACTACAGTATCTGGGCTGGC ATATGGAACTTGATCAGCGAGACGTGCATCATCATCTGGGATTATGCGACACGATGTTTACCACGCCGCAGGGGA TACAGCTACCTCAACTCCACTGCCAGCAATCGAAACAGAAGCTCCGAAGCCGAAAACAGGTTGATTGATCAGTTG GACGAGGAGTGGGATGACTAG |
| Transcript | >OphauG2|2689 ATGCGCTGGTCCGTCTCTGCCGTGCTGCTTGCTGCTGCAATTGCCGTTCCAGCCGATGCAGTCGACAATGAAGCA ACTGGGACGACAACTTCAGCCCCGGCTTGCACGGCTACGTCGTCGTCGGGCAGTGGAGCCTTTTTCGATCTCCGA CCCGATCAAGCAACCCATGCTGACCCCAAAGGCAAGGCGCACAAGACGGCTGTCGCCAAGGACTATCATGCAAAG GGCCACGATTATGGCAAGAATTTCACCATGAATATCTGTGGCTCCGTTGTCGACGCCGTCAGTGATGTTGTTGGT GTCCAAAAGAGCGACTGGGCCAACGTCAGCGCCTACTACATGTCTCGCGGCAGCATCTACTCCATAGGATCCGAG TCAATGGACCTACGCAGTCGCGGACGCAAGCTTGTCCTGCAGTACACTGGTGGCTCGCCCTGCGACTCGGCCAAG TCTGCCAAGAATCGAAGAAGCGCCCCGTCAGATCAAGACCATGGACTAAGAGCAAGAGACGACACCGCATCGGTC CGACGCAAGTCCACCACCATCTCCTTTCTCTGCGACCGCGACCCTAGCAACTCGCAGGCCAGCATTTCGTTTGTT GGCACCGACCCCGACGAGTGCGCATACTTCTTCGAGGCCCGTTCGGTGCACGCGTGCGCCCATGCGGAGCCGCAC AAGCCTGGCAGTGTTGGCCCGGGTAGCGTCTTTGGCATTATCCTGCTCATTGCGGTTCTCGTCTACGCCCTGGGT GGTGTCTTTTACAACCGCACCGTCACCAACGCCCGCGGCTGGCGTCAGCTGCCCAACTACAGTATCTGGGCTGGC ATATGGAACTTGATCAGCGAGACGTGCATCATCATCTGGGATTATGCGACACGATGTTTACCACGCCGCAGGGGA TACAGCTACCTCAACTCCACTGCCAGCAATCGAAACAGAAGCTCCGAAGCCGAAAACAGGTTGATTGATCAGTTG GACGAGGAGTGGGATGACTAG |
| Gene | >OphauG2|2689 ATGCGCTGGTCCGTCTCTGCCGTGCTGCTTGCTGCTGCAATTGCCGTTCCAGCCGATGCAGTCGACAATGAAGCA ACTGGGACGACAACTTCAGCCCCGGCTTGCACGGCTACGTCGTCGTCGGGCAGTGGAGCCTTTTTCGATCTCCGA CCCGATCAAGCAACCCATGCTGACCCCAAAGGCAAGGCGCACAAGACGGCTGTCGCCAAGGACTATCATGCAAAG GGCCACGATTATGGCAAGAATTTCACCATGAATATCTGTGGCTCCGTTGTCGACGCCGTCAGTGATGTTGTTGGT GTCCAAAAGAGCGACTGGGCCAACGTCAGCGCCTACTACATGTCTCGCGGCAGCATCTACTCCATAGGGTCCGTC TGAATTCCTCTGCACGGACGCTGCCGCTCCAGCTGACATGTTGGCCCTAGATCCGAGTCAATGGACCTACGCAGT CGCGGACGCAAGCTTGTCCTGCAGTACACTGGTGGCTCGCCCTGCGACTCGGCCAAGTCTGCCAAGAATCGAAGA AGCGCCCCGTCAGATCAAGACCATGGACTAAGAGCAAGAGACGACACCGCATCGGTCCGACGCAAGTCCACCACC ATCTCCTTTCTCTGCGACCGCGACCCTAGCAACTCGCAGGCCAGCATTTCGTTTGTTGGCACCGACCCCGACGAG TGCGCATACTTCTTCGAGGCCCGTTCGGTGCACGCGTGCGCCCATGCGGAGCCGCACAAGCCTGGCAGTGTTGGC CCGGGTAGCGTCTTTGGCATTATCCTGCTCATTGCGGTTCTCGTCTACGCCCTGGGTGGTGTCTTTTACAACCGC ACCGTCACCAACGCCCGCGGCTGGCGTCAGCTGCCCAACTACAGTATCTGGGCTGGCATATGGAACTTGATCAGC GTGCGTCAGCCCGAATCTCCGGCCCAGCCTGGAACTGCCCTGGCATCCACAAGACCATCACCATGTCCTTCTCCG TCTTTGCTTCTCTCTCGCTCTTCTTCAGACTCTACCTCTTCTACTGCTTCTTCCCGCTGGCTTAAACCGCCCTTG TCCACTGTTACCACTGTTCGTTCTTCTTCTCCCAGCTAACTTGGAATTTTGCGCGCGTGCAGGAGACGTGCATCA TCATCTGGGATTATGCGACACGATGTTTACCACGCCGCAGGGGATACAGCTACCTCAACTCCACTGCCAGCAATC GAAACAGAAGCTCCGAAGCCGAAAACAGGTTGATTGATCAGTTGGACGAGGAGTGGGATGACTAG |