© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2666 |
| Gene name | |
| Location | Contig_2:84992..86642 |
| Strand | - |
| Gene length (bp) | 1650 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1650 |
| Protein length (aa) | 550 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | 1.9E-23 | 207 | 518 |
| PF02148 | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | 1.6E-12 | 106 | 167 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9USR2|UBP10_SCHPO | Probable mRNA-splicing protein ubp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp10 PE=3 SV=1 | 87 | 534 | 2.0E-169 |
| sp|Q3TIX9|SNUT2_MOUSE | U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus GN=Usp39 PE=1 SV=2 | 2 | 535 | 1.0E-132 |
| sp|Q53GS9|SNUT2_HUMAN | U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens GN=USP39 PE=1 SV=2 | 89 | 535 | 5.0E-132 |
| sp|Q5R761|SNUT2_PONAB | U4/U6.U5 tri-snRNP-associated protein 2 OS=Pongo abelii GN=USP39 PE=2 SV=1 | 89 | 535 | 4.0E-131 |
| sp|P43589|SAD1_YEAST | Pre-mRNA-splicing factor SAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAD1 PE=1 SV=1 | 89 | 536 | 1.0E-67 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9USR2|UBP10_SCHPO | Probable mRNA-splicing protein ubp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp10 PE=3 SV=1 | 87 | 534 | 2.0E-169 |
| sp|Q3TIX9|SNUT2_MOUSE | U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus GN=Usp39 PE=1 SV=2 | 2 | 535 | 1.0E-132 |
| sp|Q53GS9|SNUT2_HUMAN | U4/U6.U5 tri-snRNP-associated protein 2 OS=Homo sapiens GN=USP39 PE=1 SV=2 | 89 | 535 | 5.0E-132 |
| sp|Q5R761|SNUT2_PONAB | U4/U6.U5 tri-snRNP-associated protein 2 OS=Pongo abelii GN=USP39 PE=2 SV=1 | 89 | 535 | 4.0E-131 |
| sp|P43589|SAD1_YEAST | Pre-mRNA-splicing factor SAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAD1 PE=1 SV=1 | 89 | 536 | 1.0E-67 |
| sp|Q09738|UBP8_SCHPO | Probable ubiquitin carboxyl-terminal hydrolase 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp8 PE=3 SV=1 | 133 | 430 | 3.0E-09 |
| sp|Q9Y6I4|UBP3_HUMAN | Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3 PE=1 SV=2 | 105 | 477 | 1.0E-08 |
| sp|Q91W36|UBP3_MOUSE | Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3 PE=2 SV=1 | 105 | 477 | 6.0E-08 |
| sp|A6QR55|UBP4_BOVIN | Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2 SV=1 | 204 | 385 | 6.0E-08 |
| sp|Q13107|UBP4_HUMAN | Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4 PE=1 SV=3 | 204 | 385 | 6.0E-08 |
| sp|A6NNY8|UBP27_HUMAN | Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X PE=2 SV=3 | 202 | 452 | 1.0E-07 |
| sp|Q5RCD3|UBP4_PONAB | Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4 PE=2 SV=1 | 204 | 385 | 1.0E-07 |
| sp|Q80U87|UBP8_MOUSE | Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1 SV=2 | 177 | 452 | 2.0E-07 |
| sp|Q93Y01|UBP9_ARATH | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1 | 192 | 314 | 2.0E-07 |
| sp|Q9ZSB5|UBP10_ARATH | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana GN=UBP10 PE=2 SV=2 | 194 | 314 | 6.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0004843 | cysteine-type deubiquitinase activity | Yes |
| GO:0016579 | protein deubiquitination | Yes |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0070647 | protein modification by small protein conjugation or removal | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0043167 | ion binding | No |
| GO:0019538 | protein metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0070646 | protein modification by small protein removal | No |
| GO:0008152 | metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0016787 | hydrolase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0005488 | binding | No |
| GO:0008234 | cysteine-type peptidase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0019783 | ubiquitin-like protein peptidase activity | No |
| GO:0008233 | peptidase activity | No |
| GO:0006508 | proteolysis | No |
| GO:0101005 | deubiquitinase activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0043169 | cation binding | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2666 MAKRHASESLEELSGVASPAVKKSRLSEQQATNGAGETTTMAGTGDREQEFQDGDGESDGESDDAQSHQAPVGAP LRQSAPTEGYADLYLDTIDRNVLDFDFEKLCSVSLSNINVYACLVCGRYFQGRGPKSHAYFHALDEDHHVFISLE SQRVWVLPEGYEVKSKSLDDIKYVSDPRYTKREVMQLDRRSSRSWTLAGKQYTPGFVGINNIKENDYLNVVVQAL AHVTPLRNYFLLEDLSACSELVRRCSTLFRKMWNPRAFRAHVSPHELLQEVSLRSSKRFTLTAQSDPVDFLSWFL NNLHLGLGGSRSRPGSSIVQRIFQGRIKVESQAISARAVAGDRLRFQDADHVDVALVRFLLLTLDLPPAPLFQDE LERNIIPQVPLTTILAKYDGQRAQEHHAQRKRHRLLHPLPPFLMFHIKRFSQNKFVAERNPTIVTFDARNLDMSP FVEPDPTHWPPSEPIWYDLVANIVHEAVRRREDVADSGEERKTWKVQVRDKATGQWLVCQDLFVDSIQGELLYLG ESYLQIWERRKEPRATADKGKTKA* |
| Coding | >OphauG2|2666 ATGGCAAAGCGTCACGCGTCCGAGTCTCTGGAGGAGCTGTCTGGAGTGGCATCGCCCGCCGTGAAGAAATCGCGT CTTTCGGAGCAACAAGCCACCAATGGCGCCGGCGAGACGACGACCATGGCCGGCACCGGAGACCGAGAGCAAGAG TTCCAGGATGGTGACGGCGAGAGCGACGGCGAGAGCGACGACGCACAAAGCCATCAAGCACCAGTGGGAGCGCCC TTGCGGCAGAGTGCGCCCACTGAAGGCTACGCCGACCTCTACCTCGACACCATTGACCGCAACGTGCTCGACTTT GACTTTGAGAAGCTGTGCTCAGTCTCGCTATCAAACATCAATGTCTACGCATGCCTGGTGTGCGGGCGCTACTTC CAGGGCCGCGGCCCCAAGTCGCATGCCTATTTCCACGCTCTCGACGAGGACCACCACGTCTTCATCAGCCTCGAG TCGCAGCGTGTCTGGGTGCTGCCCGAGGGCTACGAGGTCAAGAGCAAGTCGCTCGACGACATCAAGTACGTGTCG GACCCCCGGTATACCAAGCGCGAGGTGATGCAGCTCGATCGCCGCAGCAGCCGCAGCTGGACCCTGGCCGGCAAG CAGTACACGCCTGGCTTTGTCGGCATCAACAATATCAAGGAAAACGACTATCTCAACGTTGTCGTCCAGGCGCTG GCCCACGTCACGCCCCTGCGCAACTATTTTCTCCTCGAGGACCTGTCGGCCTGCTCCGAGCTGGTGCGCAGATGC AGCACGCTGTTTCGCAAAATGTGGAATCCACGCGCCTTTCGAGCCCACGTCTCGCCCCATGAGCTGCTGCAGGAA GTGTCGCTGCGGTCCAGCAAGCGCTTCACTCTCACAGCCCAGTCGGACCCTGTCGATTTCTTGTCCTGGTTCCTC AACAATCTCCATCTTGGCCTCGGCGGCTCTCGCTCCCGCCCCGGCAGCTCCATCGTCCAGCGCATTTTCCAGGGC AGGATAAAGGTCGAGTCGCAGGCCATTTCCGCCCGCGCCGTCGCGGGCGATCGTCTTCGCTTCCAAGACGCCGAC CATGTCGACGTGGCCCTTGTCCGATTTCTCCTCCTCACCCTAGACCTGCCCCCGGCGCCTCTTTTCCAGGACGAG CTGGAGCGCAACATCATCCCCCAGGTGCCTCTGACCACCATCCTGGCCAAATACGACGGCCAACGCGCCCAAGAA CATCATGCCCAGCGCAAGCGCCATCGCCTCCTCCACCCGCTGCCCCCATTTCTCATGTTTCACATCAAGCGCTTC TCGCAAAACAAATTCGTTGCCGAGCGCAATCCCACCATTGTCACCTTTGACGCCCGCAATCTCGACATGTCTCCC TTTGTCGAACCTGATCCAACACATTGGCCCCCCAGCGAGCCCATTTGGTACGATCTCGTCGCAAACATTGTTCAC GAAGCCGTCCGCCGCCGCGAAGACGTGGCCGACAGTGGCGAGGAACGCAAGACGTGGAAGGTCCAAGTCAGGGAT AAAGCCACGGGCCAGTGGCTTGTATGCCAGGATCTCTTTGTTGATAGCATCCAGGGTGAACTGCTCTATCTCGGC GAGTCTTATCTGCAGATTTGGGAGCGCAGAAAAGAGCCAAGAGCAACAGCCGACAAGGGAAAGACAAAGGCATAG |
| Transcript | >OphauG2|2666 ATGGCAAAGCGTCACGCGTCCGAGTCTCTGGAGGAGCTGTCTGGAGTGGCATCGCCCGCCGTGAAGAAATCGCGT CTTTCGGAGCAACAAGCCACCAATGGCGCCGGCGAGACGACGACCATGGCCGGCACCGGAGACCGAGAGCAAGAG TTCCAGGATGGTGACGGCGAGAGCGACGGCGAGAGCGACGACGCACAAAGCCATCAAGCACCAGTGGGAGCGCCC TTGCGGCAGAGTGCGCCCACTGAAGGCTACGCCGACCTCTACCTCGACACCATTGACCGCAACGTGCTCGACTTT GACTTTGAGAAGCTGTGCTCAGTCTCGCTATCAAACATCAATGTCTACGCATGCCTGGTGTGCGGGCGCTACTTC CAGGGCCGCGGCCCCAAGTCGCATGCCTATTTCCACGCTCTCGACGAGGACCACCACGTCTTCATCAGCCTCGAG TCGCAGCGTGTCTGGGTGCTGCCCGAGGGCTACGAGGTCAAGAGCAAGTCGCTCGACGACATCAAGTACGTGTCG GACCCCCGGTATACCAAGCGCGAGGTGATGCAGCTCGATCGCCGCAGCAGCCGCAGCTGGACCCTGGCCGGCAAG CAGTACACGCCTGGCTTTGTCGGCATCAACAATATCAAGGAAAACGACTATCTCAACGTTGTCGTCCAGGCGCTG GCCCACGTCACGCCCCTGCGCAACTATTTTCTCCTCGAGGACCTGTCGGCCTGCTCCGAGCTGGTGCGCAGATGC AGCACGCTGTTTCGCAAAATGTGGAATCCACGCGCCTTTCGAGCCCACGTCTCGCCCCATGAGCTGCTGCAGGAA GTGTCGCTGCGGTCCAGCAAGCGCTTCACTCTCACAGCCCAGTCGGACCCTGTCGATTTCTTGTCCTGGTTCCTC AACAATCTCCATCTTGGCCTCGGCGGCTCTCGCTCCCGCCCCGGCAGCTCCATCGTCCAGCGCATTTTCCAGGGC AGGATAAAGGTCGAGTCGCAGGCCATTTCCGCCCGCGCCGTCGCGGGCGATCGTCTTCGCTTCCAAGACGCCGAC CATGTCGACGTGGCCCTTGTCCGATTTCTCCTCCTCACCCTAGACCTGCCCCCGGCGCCTCTTTTCCAGGACGAG CTGGAGCGCAACATCATCCCCCAGGTGCCTCTGACCACCATCCTGGCCAAATACGACGGCCAACGCGCCCAAGAA CATCATGCCCAGCGCAAGCGCCATCGCCTCCTCCACCCGCTGCCCCCATTTCTCATGTTTCACATCAAGCGCTTC TCGCAAAACAAATTCGTTGCCGAGCGCAATCCCACCATTGTCACCTTTGACGCCCGCAATCTCGACATGTCTCCC TTTGTCGAACCTGATCCAACACATTGGCCCCCCAGCGAGCCCATTTGGTACGATCTCGTCGCAAACATTGTTCAC GAAGCCGTCCGCCGCCGCGAAGACGTGGCCGACAGTGGCGAGGAACGCAAGACGTGGAAGGTCCAAGTCAGGGAT AAAGCCACGGGCCAGTGGCTTGTATGCCAGGATCTCTTTGTTGATAGCATCCAGGGTGAACTGCTCTATCTCGGC GAGTCTTATCTGCAGATTTGGGAGCGCAGAAAAGAGCCAAGAGCAACAGCCGACAAGGGAAAGACAAAGGCATAG |
| Gene | >OphauG2|2666 ATGGCAAAGCGTCACGCGTCCGAGTCTCTGGAGGAGCTGTCTGGAGTGGCATCGCCCGCCGTGAAGAAATCGCGT CTTTCGGAGCAACAAGCCACCAATGGCGCCGGCGAGACGACGACCATGGCCGGCACCGGAGACCGAGAGCAAGAG TTCCAGGATGGTGACGGCGAGAGCGACGGCGAGAGCGACGACGCACAAAGCCATCAAGCACCAGTGGGAGCGCCC TTGCGGCAGAGTGCGCCCACTGAAGGCTACGCCGACCTCTACCTCGACACCATTGACCGCAACGTGCTCGACTTT GACTTTGAGAAGCTGTGCTCAGTCTCGCTATCAAACATCAATGTCTACGCATGCCTGGTGTGCGGGCGCTACTTC CAGGGCCGCGGCCCCAAGTCGCATGCCTATTTCCACGCTCTCGACGAGGACCACCACGTCTTCATCAGCCTCGAG TCGCAGCGTGTCTGGGTGCTGCCCGAGGGCTACGAGGTCAAGAGCAAGTCGCTCGACGACATCAAGTACGTGTCG GACCCCCGGTATACCAAGCGCGAGGTGATGCAGCTCGATCGCCGCAGCAGCCGCAGCTGGACCCTGGCCGGCAAG CAGTACACGCCTGGCTTTGTCGGCATCAACAATATCAAGGAAAACGACTATCTCAACGTTGTCGTCCAGGCGCTG GCCCACGTCACGCCCCTGCGCAACTATTTTCTCCTCGAGGACCTGTCGGCCTGCTCCGAGCTGGTGCGCAGATGC AGCACGCTGTTTCGCAAAATGTGGAATCCACGCGCCTTTCGAGCCCACGTCTCGCCCCATGAGCTGCTGCAGGAA GTGTCGCTGCGGTCCAGCAAGCGCTTCACTCTCACAGCCCAGTCGGACCCTGTCGATTTCTTGTCCTGGTTCCTC AACAATCTCCATCTTGGCCTCGGCGGCTCTCGCTCCCGCCCCGGCAGCTCCATCGTCCAGCGCATTTTCCAGGGC AGGATAAAGGTCGAGTCGCAGGCCATTTCCGCCCGCGCCGTCGCGGGCGATCGTCTTCGCTTCCAAGACGCCGAC CATGTCGACGTGGCCCTTGTCCGATTTCTCCTCCTCACCCTAGACCTGCCCCCGGCGCCTCTTTTCCAGGACGAG CTGGAGCGCAACATCATCCCCCAGGTGCCTCTGACCACCATCCTGGCCAAATACGACGGCCAACGCGCCCAAGAA CATCATGCCCAGCGCAAGCGCCATCGCCTCCTCCACCCGCTGCCCCCATTTCTCATGTTTCACATCAAGCGCTTC TCGCAAAACAAATTCGTTGCCGAGCGCAATCCCACCATTGTCACCTTTGACGCCCGCAATCTCGACATGTCTCCC TTTGTCGAACCTGATCCAACACATTGGCCCCCCAGCGAGCCCATTTGGTACGATCTCGTCGCAAACATTGTTCAC GAAGCCGTCCGCCGCCGCGAAGACGTGGCCGACAGTGGCGAGGAACGCAAGACGTGGAAGGTCCAAGTCAGGGAT AAAGCCACGGGCCAGTGGCTTGTATGCCAGGATCTCTTTGTTGATAGCATCCAGGGTGAACTGCTCTATCTCGGC GAGTCTTATCTGCAGATTTGGGAGCGCAGAAAAGAGCCAAGAGCAACAGCCGACAAGGGAAAGACAAAGGCATAG |