Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|2639
Gene name
Location	Contig_2:23105..23521
Strand	+
Gene length (bp)	416
Transcript length (bp)	297
Coding sequence length (bp)	297
Protein length (aa)	99

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01679	Pmp3	Proteolipid membrane potential modulator	5.3E-19	8	52

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q4WYA5\|PMP3_ASPFU	Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1	5	56	8.0E-13
sp\|Q871V2\|PMP3_NEUCR	Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1	5	56	4.0E-11
sp\|Q4HXT6\|PMP3_GIBZE	Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2	5	56	9.0E-11
sp\|Q22702\|YCU5_CAEEL	UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1	11	56	4.0E-09
sp\|Q9C1W4\|PMP3_SCHPO	Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2	5	56	2.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q4WYA5\|PMP3_ASPFU	Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1	5	56	8.0E-13
sp\|Q871V2\|PMP3_NEUCR	Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1	5	56	4.0E-11
sp\|Q4HXT6\|PMP3_GIBZE	Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2	5	56	9.0E-11
sp\|Q22702\|YCU5_CAEEL	UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1	11	56	4.0E-09
sp\|Q9C1W4\|PMP3_SCHPO	Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2	5	56	2.0E-08
sp\|P34655\|YOT0_CAEEL	UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans GN=ZK632.10 PE=3 SV=2	7	78	3.0E-08
sp\|P0AE42\|YQAE_ECOLI	UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12) GN=yqaE PE=3 SV=1	10	53	9.0E-08
sp\|P0AE43\|YQAE_ECOL6	UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1	10	53	9.0E-08
sp\|P0AE44\|YQAE_ECO57	UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE PE=3 SV=1	10	53	9.0E-08
sp\|Q9Y068\|RIC1_PHYIN	Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1	10	52	2.0E-07
sp\|Q9ZNQ7\|RCI2A_ARATH	Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1	10	52	5.0E-07
sp\|Q6BVN0\|PMP3_DEBHA	Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PMP3 PE=3 SV=1	16	56	6.0E-07
sp\|Q9M095\|RC23_ARATH	UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1	10	73	2.0E-06
sp\|Q9SUI0\|RC24_ARATH	UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana GN=At4g30660 PE=2 SV=1	10	69	5.0E-06
sp\|Q0DKW8\|LTI6B_ORYSJ	Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1	10	51	9.0E-06
sp\|A2Y075\|LTI6B_ORYSI	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2	10	51	9.0E-06

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GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	3	25	22
2	35	57	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|2639 MGVVSAVLVVLITILFPPIGVWAVAGCGMDLFINICLTVLGYLPGHIHAFYVEFVYYDRREQAHQGRFPNGRAPG VYSENVQSGGLGQGYGTIPPASP*
Coding	>OphauG2\|2639 ATGGGTGTCGTTTCCGCGGTTCTCGTCGTTCTCATCACCATCCTCTTCCCGCCCATTGGCGTGTGGGCCGTGGCA GGATGTGGAATGGACCTCTTCATCAACATCTGTCTGACAGTTCTGGGTTACCTGCCTGGGCACATACACGCCTTT TACGTCGAGTTTGTCTACTATGACCGTCGCGAGCAGGCTCATCAAGGCCGCTTCCCCAACGGGCGCGCTCCTGGC GTCTACTCGGAGAATGTTCAGTCGGGTGGCTTGGGGCAGGGCTACGGCACCATTCCTCCTGCCAGTCCCTAG
Transcript	>OphauG2\|2639 ATGGGTGTCGTTTCCGCGGTTCTCGTCGTTCTCATCACCATCCTCTTCCCGCCCATTGGCGTGTGGGCCGTGGCA GGATGTGGAATGGACCTCTTCATCAACATCTGTCTGACAGTTCTGGGTTACCTGCCTGGGCACATACACGCCTTT TACGTCGAGTTTGTCTACTATGACCGTCGCGAGCAGGCTCATCAAGGCCGCTTCCCCAACGGGCGCGCTCCTGGC GTCTACTCGGAGAATGTTCAGTCGGGTGGCTTGGGGCAGGGCTACGGCACCATTCCTCCTGCCAGTCCCTAG
Gene	>OphauG2\|2639 ATGGGTGTCGTTTCCGCGGTTCTCGTCGTTCTCATCACCATCCTCTGTGCGTAACCTAGCCTCAGCTCTCCAATA GGCCGCCGACTAACAGGGTCTACCAGTCCCGCCCATTGGCGTGTGGGCCGTGGCAGGATGTGGAATGGGTAAGCC GAGCCCAAGTGCTGTCTTTTGCGGCGCCCCAGAGCTGACGCATTCAATATCTGGCAGACCTCTTCATCAACATCT GTCTGACAGTTCTGGGTTACCTGCCTGGGCACATACACGCCTTTTACGTCGAGTTTGTCTACTATGACCGTCGCG AGCAGGCTCATCAAGGCCGCTTCCCCAACGGGCGCGCTCCTGGCGTCTACTCGGAGAATGTTCAGTCGGGTGGCT TGGGGCAGGGCTACGGCACCATTCCTCCTGCCAGTCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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