© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2614 |
| Gene name | |
| Location | Contig_198:22460..23869 |
| Strand | - |
| Gene length (bp) | 1409 |
| Transcript length (bp) | 1203 |
| Coding sequence length (bp) | 1203 |
| Protein length (aa) | 401 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05637 | Glyco_transf_34 | galactosyl transferase GMA12/MNN10 family | 2.3E-05 | 85 | 169 |
| PF05637 | Glyco_transf_34 | galactosyl transferase GMA12/MNN10 family | 5.8E-07 | 170 | 273 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 16 | 33 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2614 MLATACFPLQPRQRRVASLVVLVGFVTLLLHFTRHREAWRDRAQQVLELSSFKMPTHKDAEKAGHVYEKSRIIKV TMIYGSSSHIYERALRTHKVHNQIHGYQMMVQRHEMLPGFWTKPSFILSVILNELSKSPNDRLEWIFWVDADSVI LNYNTPLDIFLPPDHIEELRHINVLVTHDWNGLNNGIFGLRVGPYAAELFASIMAYSNFHPDKPLRFQDQSVMDE VLKQSKFGKHSAKLPQRWFNAYTTGIENMPAESEVQAGDLLVHFAGVGNRESLVTHWCDLSEKREPKWTTQPSEN GLVEQLRSFWESYKTELVQNKEKWVQDKTQLQEKIAKAHDALDASAAANSEALRKALQAAQDLNATIFTMGPDDA WDAERERLSTALEEMDKASTPPNAA* |
| Coding | >OphauG2|2614 ATGTTGGCGACGGCTTGTTTCCCTCTGCAGCCCAGACAGCGGCGAGTTGCAAGTCTGGTGGTGCTGGTTGGCTTC GTCACCCTGCTTCTACACTTTACTCGCCATCGGGAAGCATGGCGCGATCGAGCTCAGCAAGTTTTGGAGCTATCC AGCTTCAAGATGCCGACACACAAAGACGCGGAAAAGGCAGGTCATGTGTATGAAAAGTCGCGCATTATCAAAGTC ACCATGATATACGGGTCCAGCAGCCACATATACGAACGCGCCCTGCGCACACACAAGGTGCACAATCAGATACAC GGCTACCAGATGATGGTCCAGCGCCACGAGATGCTGCCTGGCTTCTGGACCAAGCCATCATTCATCCTGTCCGTC ATCCTCAACGAGCTCAGCAAGTCGCCCAACGACCGACTGGAATGGATCTTTTGGGTCGACGCCGACTCCGTCATC CTGAATTACAACACGCCGCTAGACATCTTTCTTCCTCCTGATCATATTGAAGAGCTGCGGCACATCAATGTCTTG GTCACCCATGATTGGAACGGGCTGAATAACGGCATCTTTGGGCTTCGCGTTGGCCCCTACGCGGCCGAGCTGTTT GCGAGCATCATGGCTTACAGCAACTTCCACCCCGACAAGCCCCTCAGATTCCAGGATCAGTCCGTCATGGATGAA GTGCTCAAGCAGAGCAAGTTTGGCAAGCACTCGGCAAAGCTGCCGCAGCGGTGGTTCAACGCATACACAACCGGC ATCGAAAACATGCCCGCCGAAAGCGAAGTCCAAGCAGGCGATCTCCTCGTGCACTTTGCCGGGGTCGGAAACCGC GAAAGCCTCGTCACGCACTGGTGCGACCTGTCGGAGAAACGCGAGCCCAAATGGACCACCCAGCCCTCTGAAAAT GGCCTCGTCGAGCAATTGCGCAGCTTTTGGGAAAGCTACAAGACAGAACTGGTGCAAAACAAGGAGAAATGGGTC CAGGACAAGACGCAGCTCCAAGAAAAAATTGCCAAGGCGCACGATGCTCTAGATGCGAGCGCAGCCGCAAACTCG GAGGCGCTGCGCAAGGCATTGCAGGCTGCACAAGACTTGAATGCCACAATCTTCACCATGGGCCCGGATGATGCT TGGGATGCAGAACGAGAGAGATTGAGCACCGCGCTGGAAGAAATGGACAAGGCGTCAACACCACCAAATGCTGCT TAG |
| Transcript | >OphauG2|2614 ATGTTGGCGACGGCTTGTTTCCCTCTGCAGCCCAGACAGCGGCGAGTTGCAAGTCTGGTGGTGCTGGTTGGCTTC GTCACCCTGCTTCTACACTTTACTCGCCATCGGGAAGCATGGCGCGATCGAGCTCAGCAAGTTTTGGAGCTATCC AGCTTCAAGATGCCGACACACAAAGACGCGGAAAAGGCAGGTCATGTGTATGAAAAGTCGCGCATTATCAAAGTC ACCATGATATACGGGTCCAGCAGCCACATATACGAACGCGCCCTGCGCACACACAAGGTGCACAATCAGATACAC GGCTACCAGATGATGGTCCAGCGCCACGAGATGCTGCCTGGCTTCTGGACCAAGCCATCATTCATCCTGTCCGTC ATCCTCAACGAGCTCAGCAAGTCGCCCAACGACCGACTGGAATGGATCTTTTGGGTCGACGCCGACTCCGTCATC CTGAATTACAACACGCCGCTAGACATCTTTCTTCCTCCTGATCATATTGAAGAGCTGCGGCACATCAATGTCTTG GTCACCCATGATTGGAACGGGCTGAATAACGGCATCTTTGGGCTTCGCGTTGGCCCCTACGCGGCCGAGCTGTTT GCGAGCATCATGGCTTACAGCAACTTCCACCCCGACAAGCCCCTCAGATTCCAGGATCAGTCCGTCATGGATGAA GTGCTCAAGCAGAGCAAGTTTGGCAAGCACTCGGCAAAGCTGCCGCAGCGGTGGTTCAACGCATACACAACCGGC ATCGAAAACATGCCCGCCGAAAGCGAAGTCCAAGCAGGCGATCTCCTCGTGCACTTTGCCGGGGTCGGAAACCGC GAAAGCCTCGTCACGCACTGGTGCGACCTGTCGGAGAAACGCGAGCCCAAATGGACCACCCAGCCCTCTGAAAAT GGCCTCGTCGAGCAATTGCGCAGCTTTTGGGAAAGCTACAAGACAGAACTGGTGCAAAACAAGGAGAAATGGGTC CAGGACAAGACGCAGCTCCAAGAAAAAATTGCCAAGGCGCACGATGCTCTAGATGCGAGCGCAGCCGCAAACTCG GAGGCGCTGCGCAAGGCATTGCAGGCTGCACAAGACTTGAATGCCACAATCTTCACCATGGGCCCGGATGATGCT TGGGATGCAGAACGAGAGAGATTGAGCACCGCGCTGGAAGAAATGGACAAGGCGTCAACACCACCAAATGCTGCT TAG |
| Gene | >OphauG2|2614 ATGTTGGCGACGGCTTGTTTCCCTCTGCAGCCCAGACAGCGGCGAGTTGCAAGTCTGGTGGTGCTGGTTGGCTTC GTCACCCTGCTTCTACACTTTACTCGCCATCGGGAAGCATGGCGCGATCGAGCTCAGCAAGTTTTGGAGCTATCC AGCTTCAAGATGCCGACACACAAAGGTATCCTTTTTTTTTCTCCACCTCGCTACCAATCCCAAGGTTGGAAAAGA AAACGGGTTGAAAAAGACCAAGTCTAACAAGACAATGCCCAAGACGCGGAAAAGGCAGGTCATGTGTATGAAAAG TCGCGCATTATCAAAGTCACCATGATATACGGGTCCAGCAGCCACATATACGAACGCGCCCTGCGCACACACAAG GTGCACAATCAGATACACGGCTACCAGATGATGGTCCAGCGCCACGAGATGCTGCCTGGCTTCTGGACCAAGCCA TCATTCATCCTGTCCGTCATCCTCAACGAGCTCAGCAAGTCGCCCAACGACCGACTGGAATGGATCTTTTGGGTC GACGCCGACTCCGTCATCCTGAATTACAACACGCCGCTAGACATCTTTCTTCCTCCTGATCATATTGAAGAGCTG CGGCACATCAATGTCTTGGTCACCCATGATTGGAACGGGCTGAATAACGGCATCTTTGGGCTTCGCGTTGGCCCC TACGCGGCCGAGCTGTTTGCGAGCATCATGGCTTACAGCAACTTCCACCCCGACAAGCCCCTCAGATTCCAGGAT CAGTCCGTCATGGATGAAGTGCTCAAGCAGAGCAAGTTTGGCAAGCACTCGGCAAAGCTGCCGCAGCGGGTAAGC CGAGCATCTTTTATCTTGCTTGGGCCGTCTCTCTGCTAACTGCGCGGCAGTGGTTCAACGCATACACAACCGGCA TCGAAAACATGCCCGCCGAAAGCGAAGTCCAAGCAGGCGATCTCCTCGTGCACTTTGCCGGGGTCGGAAACCGCG AAAGCCTCGTCACGCACTGGTGCGACCTGTCGGAGAAACGCGAGCCCAAATGGACCACCCAGCCCTCTGAAAATG GCCTCGTCGAGCAATTGCGCAGCTTTTGGGAAAGCTACAAGACAGAACTGGTGCAAAACAAGGAGAAATGGGTCC AGGACAAGACGCAGCTCCAAGAAAAAATTGCCAAGGCGCACGATGCTCTAGATGCGAGCGCAGCCGCAAACTCGG AGGCGCTGCGCAAGGCATTGCAGGCTGCACAAGACTTGAATGCCACAATCTTCACCATGGGCCCGGATGATGCTT GGGATGCAGAACGAGAGAGATTGAGCACCGCGCTGGAAGAAATGGACAAGGTGAGGAGGTCCTTTATCTTCAAGG CCTGTTGCTCGAGGAAGCTAACATGACAGCAGGCGTCAACACCACCAAATGCTGCTTAG |