Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2534
Gene name
LocationContig_1933:451..1168
Strand+
Gene length (bp)717
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08229 SHR3_chaperone ER membrane protein SH3 1.1E-73 18 209

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q02774|SHR3_YEAST Secretory component protein SHR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHR3 PE=1 SV=2 14 207 1.0E-21

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 74 96 22
3 103 125 22
4 163 181 18

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1334
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2534 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|511
Ophiocordyceps camponoti-floridani Ophcf2|07267
Ophiocordyceps camponoti-rufipedis Ophun1|3060
Ophiocordyceps kimflemingae Ophio5|1892
Ophiocordyceps subramaniannii Hirsu2|10703

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2534
MAYIDYSKTTRSNNYRGSGSFATFLIIGPTCFFLGILFASFPYDFQLLWTKEPVSDTYYDQLETHLRFMHQSPPL
IGRILNIMMSVGYLGFFSKLFRPSEANFLFDGASLILYTIGVAVYLSNIVRGLRAISANLWESPEFLENAEGRFE
GEYVLGREDSLKVLAASNTILALVLIGVLILQAGQWYAEKRESDDEAAAEAAEKKDKKKQ*
Coding >OphauG2|2534
ATGGCCTACATTGATTACTCCAAGACGACCAGGTCCAACAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG
ATTATTGGACCGACGTGCTTCTTCCTCGGCATTCTCTTTGCCTCATTCCCCTACGACTTTCAGTTGCTATGGACT
AAGGAGCCCGTCAGTGACACATACTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCGCCGCCGCTG
ATAGGACGCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTCTCCAAGCTCTTCCGGCCCAGCGAG
GCAAACTTTTTGTTTGACGGAGCATCCCTCATTCTCTACACGATTGGCGTGGCCGTCTACCTCTCCAACATTGTG
CGCGGACTGCGCGCCATTAGCGCCAATCTGTGGGAGAGTCCCGAGTTTCTGGAAAACGCAGAGGGCCGCTTCGAG
GGCGAGTATGTCCTGGGCCGCGAGGATAGCCTCAAGGTGCTGGCAGCGAGCAATACCATTTTGGCGCTTGTCCTT
ATTGGCGTGCTCATCCTCCAGGCAGGGCAGTGGTATGCAGAGAAGAGGGAGTCGGACGACGAGGCGGCGGCCGAG
GCGGCGGAGAAGAAGGACAAGAAGAAGCAGTGA
Transcript >OphauG2|2534
ATGGCCTACATTGATTACTCCAAGACGACCAGGTCCAACAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG
ATTATTGGACCGACGTGCTTCTTCCTCGGCATTCTCTTTGCCTCATTCCCCTACGACTTTCAGTTGCTATGGACT
AAGGAGCCCGTCAGTGACACATACTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCGCCGCCGCTG
ATAGGACGCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTCTCCAAGCTCTTCCGGCCCAGCGAG
GCAAACTTTTTGTTTGACGGAGCATCCCTCATTCTCTACACGATTGGCGTGGCCGTCTACCTCTCCAACATTGTG
CGCGGACTGCGCGCCATTAGCGCCAATCTGTGGGAGAGTCCCGAGTTTCTGGAAAACGCAGAGGGCCGCTTCGAG
GGCGAGTATGTCCTGGGCCGCGAGGATAGCCTCAAGGTGCTGGCAGCGAGCAATACCATTTTGGCGCTTGTCCTT
ATTGGCGTGCTCATCCTCCAGGCAGGGCAGTGGTATGCAGAGAAGAGGGAGTCGGACGACGAGGCGGCGGCCGAG
GCGGCGGAGAAGAAGGACAAGAAGAAGCAGTGA
Gene >OphauG2|2534
ATGGCCTACATTGATTACTCCAAGACGACCAGGTCCAACAACTATCGCGGGTCCGGATCATTTGCCACGTTTTTG
ATTATTGGACGTAGGTTTTCTGGGCACGAGAGAGAAAACGACCAAAGACATCAACGGACAGTGGGCTGACGGCAA
GGCATTGGCTTGCATCCAGCGACGTGCTTCTTCCTCGGCATTCTCTTTGCCTCATTCCCCTACGACTTTCAGTTG
CTATGGACTAAGGAGCCCGTCAGTGACACATACTACGACCAACTCGAGACACACCTGCGCTTCATGCACCAGTCG
CCGCCGCTGATAGGACGCATCCTCAACATCATGATGAGTGTCGGCTACCTCGGCTTCTTCTCCAAGCTCTTCCGG
CCCAGCGAGGCAAACTTTTTGTTTGACGGAGCATCCCTCATTCTCTACACGATTGGCGTGGCCGTCTACCTCTCC
AACATTGTGCGCGGACTGCGCGCCATTAGCGCCAATCTGTGGGAGAGTCCCGAGTTTCTGGAAAACGCAGAGGGC
CGCTTCGAGGGCGAGTATGTCCTGGGCCGCGAGGATAGCCTCAAGGTGCTGGCAGCGAGCAATACCATTTTGGCG
CTTGTCCTTATTGGCGTGCTCATCCTCCAGGCAGGGCAGTGGTATGCAGAGAAGAGGGAGTCGGACGACGAGGCG
GCGGCCGAGGCGGCGGAGAAGAAGGACAAGAAGAAGCAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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