Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2498
Gene name
LocationContig_191:9049..10098
Strand+
Gene length (bp)1049
Transcript length (bp)981
Coding sequence length (bp)981
Protein length (aa) 327

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P42565|FARX_LYMST FMRFamide-related neuropeptides OS=Lymnaea stagnalis PE=1 SV=1 84 239 3.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2498
MLFSKLAFALVGSVVSAAPVTSNFEADPLLQISKDQADSSYFTADPILQISKDKAGSSYFQADPMLQIAKDHAQS
SYNKRDTLKADPILQISRDQGASSYFQADPMLQIAKDNARSSYDRRSNFKADPILQISKNNGESSYFQADPMLRI
NKDQAGSSYFQADPMLQINRDNAASSYNKRSNFKADPILQISKNNGESSYFQADPMLRINKDNAASSYDKRSNFQ
ADPMLRINKDNAASSYDKRSNFQADPMLQINKDNGQSSYFTADPMLQINKDRAANSYNVRRDTFKADPMLQIAKD
KAASSYFQADPMLQINKDHAASSYDA*
Coding >OphauG2|2498
ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGCAACTTTGAA
GCTGACCCCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATC
TCAAAGGACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCT
TCGTATAATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTAC
TTCCAGGCCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAG
GCAGACCCAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATC
AACAAGGACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCT
TCGTATAACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTAC
TTCCAGGCTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAG
GCTGACCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGAC
CCCATGCTCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAG
GACCGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGAT
AAGGCTGCTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGAT
GCTTAG
Transcript >OphauG2|2498
ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGCAACTTTGAA
GCTGACCCCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATC
TCAAAGGACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCT
TCGTATAATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTAC
TTCCAGGCCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAG
GCAGACCCAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATC
AACAAGGACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCT
TCGTATAACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTAC
TTCCAGGCTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAG
GCTGACCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGAC
CCCATGCTCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAG
GACCGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGAT
AAGGCTGCTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGAT
GCTTAG
Gene >OphauG2|2498
ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGTCTGTCGAGC
CTTGCTGGAGCTGGAGACGTGATTTCGCGTTGAAGCCACTGACCTTGAGGCTTGCAGGCAACTTTGAAGCTGACC
CCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATCTCAAAGG
ACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCTTCGTATA
ATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTACTTCCAGG
CCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAGGCAGACC
CAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATCAACAAGG
ACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCTTCGTATA
ACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTACTTCCAGG
CTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGACC
CCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGACCCCATGC
TCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAGGACCGTG
CTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGATAAGGCTG
CTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGATGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail