Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|2498
Gene name
Location	Contig_191:9049..10098
Strand	+
Gene length (bp)	1049
Transcript length (bp)	981
Coding sequence length (bp)	981
Protein length (aa)	327

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P42565\|FARX_LYMST	FMRFamide-related neuropeptides OS=Lymnaea stagnalis PE=1 SV=1	84	239	3.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|2498 MLFSKLAFALVGSVVSAAPVTSNFEADPLLQISKDQADSSYFTADPILQISKDKAGSSYFQADPMLQIAKDHAQS SYNKRDTLKADPILQISRDQGASSYFQADPMLQIAKDNARSSYDRRSNFKADPILQISKNNGESSYFQADPMLRI NKDQAGSSYFQADPMLQINRDNAASSYNKRSNFKADPILQISKNNGESSYFQADPMLRINKDNAASSYDKRSNFQ ADPMLRINKDNAASSYDKRSNFQADPMLQINKDNGQSSYFTADPMLQINKDRAANSYNVRRDTFKADPMLQIAKD KAASSYFQADPMLQINKDHAASSYDA*
Coding	>OphauG2\|2498 ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGCAACTTTGAA GCTGACCCCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATC TCAAAGGACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCT TCGTATAATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTAC TTCCAGGCCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAG GCAGACCCAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATC AACAAGGACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCT TCGTATAACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTAC TTCCAGGCTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAG GCTGACCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGAC CCCATGCTCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAG GACCGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGAT AAGGCTGCTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGAT GCTTAG
Transcript	>OphauG2\|2498 ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGCAACTTTGAA GCTGACCCCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATC TCAAAGGACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCT TCGTATAATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTAC TTCCAGGCCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAG GCAGACCCAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATC AACAAGGACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCT TCGTATAACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTAC TTCCAGGCTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAG GCTGACCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGAC CCCATGCTCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAG GACCGTGCTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGAT AAGGCTGCTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGAT GCTTAG
Gene	>OphauG2\|2498 ATGCTCTTTAGCAAGCTAGCCTTTGCCCTTGTGGGCTCCGTGGTGTCGGCTGCGCCTGTTACTAGTCTGTCGAGC CTTGCTGGAGCTGGAGACGTGATTTCGCGTTGAAGCCACTGACCTTGAGGCTTGCAGGCAACTTTGAAGCTGACC CCTTGCTTCAAATCTCAAAGGACCAGGCCGACTCATCGTACTTTACCGCGGACCCTATTCTGCAAATCTCAAAGG ACAAGGCTGGCTCGTCCTACTTCCAGGCCGACCCCATGCTACAAATTGCAAAGGATCACGCCCAGTCTTCGTATA ATAAGCGAGACACCCTAAAGGCAGACCCTATTCTGCAAATCTCTAGAGACCAGGGCGCCTCGTCCTACTTCCAGG CCGACCCTATGCTGCAAATTGCAAAGGATAATGCCAGGTCATCGTATGACAGACGATCAAACTTCAAGGCAGACC CAATCCTCCAGATTTCAAAGAATAATGGAGAGTCGTCGTACTTTCAAGCTGATCCCATGCTAAGGATCAACAAGG ACCAGGCTGGCTCGTCCTATTTCCAGGCCGATCCCATGTTGCAAATCAACAGGGACAACGCTGCTTCTTCGTATA ACAAGCGCTCCAACTTCAAGGCGGACCCAATCCTCCAGATTTCAAAGAACAATGGAGAGTCGTCCTACTTCCAGG CTGATCCCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGACC CCATGCTAAGGATTAACAAGGACAACGCTGCCTCTTCATATGACAAACGCTCCAACTTCCAGGCTGACCCCATGC TCCAGATCAACAAGGACAATGGCCAGTCGTCATACTTTACTGCCGACCCGATGTTGCAGATCAACAAGGACCGTG CTGCCAACTCGTACAATGTCAGGCGTGACACCTTCAAGGCCGACCCCATGTTGCAGATTGCCAAGGATAAGGCTG CTTCTTCCTACTTCCAGGCTGATCCCATGCTCCAGATCAACAAGGACCACGCGGCATCGTCCTACGATGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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