Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|2476
Gene name
Location	Contig_190:207..2257
Strand	-
Gene length (bp)	2050
Transcript length (bp)	1872
Coding sequence length (bp)	1872
Protein length (aa)	624

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13639	zf-RING_2	Ring finger domain	2.6E-08	380	424
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	2.9E-06	380	423
PF17123	zf-RING_11	RING-like zinc finger	1.2E-06	380	409

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1MTR5\|YG66_SCHPO	Uncharacterized RING finger membrane protein C15C4.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.06c PE=3 SV=1	116	424	3.0E-11
sp\|Q8GT74\|NIP2_ARATH	NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1 SV=1	339	424	2.0E-07
sp\|Q6GPV5\|RN181_XENLA	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1	344	451	8.0E-07
sp\|Q8LDB8\|RING2_ARATH	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2	380	428	4.0E-06
sp\|Q5M974\|RN181_XENTR	E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1	344	425	4.0E-06

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1MTR5\|YG66_SCHPO	Uncharacterized RING finger membrane protein C15C4.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.06c PE=3 SV=1	116	424	3.0E-11
sp\|Q8GT74\|NIP2_ARATH	NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1 SV=1	339	424	2.0E-07
sp\|Q6GPV5\|RN181_XENLA	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1	344	451	8.0E-07
sp\|Q8LDB8\|RING2_ARATH	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2	380	428	4.0E-06
sp\|Q5M974\|RN181_XENTR	E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1	344	425	4.0E-06
sp\|Q8GT75\|NIP1_ARATH	NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1 SV=2	366	424	5.0E-06
sp\|Q9CY62\|RN181_MOUSE	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=1 SV=1	381	425	9.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 25	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	238	260	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|2476 MPALASPRLTFAAALTEIRNGVLLFSNPVWDGSKTVPSTLVRNISALSSQLGYEDFITSNLTTLSTNNAPKLDGI FGGLLFVPRIDSSSSCDAQQYDFIPRNVTRREQLPPRNFNMVALAPWFSIDCARAYLDSAAHSPVRALIFFKPNN STNRPQDVDSPVWSLDDDGAWTKKYHYPIFAVPGLEGQKMMTQLSLYSGSVNQVPHGEQLSQLYGPNPNDFVRIW TDLTMENQANTPAVWAFVLIVIGALLLIITAVSLIMHFIQRRNRNSLKRRVRSGEVDLEAMGIKRLTVPAAHVDT FALFTYNAEPDITTVPPSPTVGSLSSKSRKPSRKSRRSDPRTSNKDTPPTASTRSVRSIRSKRSSITGTGDTTAT NFQPNCQICLLSFEHCKTIIRELPCGHIFHPPCIDEFLTQNSSLCPMCKHCMLPQGYSPKITNGMVRREQAVRRL RERVDLDSSSLESGEPKLKEWGKRLFNYSGHTSCSKPPSPPDVPMASLPATQNGVLESSPPAHSQGNDAAPEAPS PTLGDEVAMESASTSDPSQPPTSTRTARCRKFKPRPLNLLPTHLEESESKETSMGRLSPSSFARERMRQLAAKNA PIDDPDHQRPYWRRVLSKAFPGF*
Coding	>OphauG2\|2476 ATGCCAGCCTTGGCATCACCACGGCTAACCTTTGCTGCAGCGCTCACCGAGATTCGAAATGGCGTACTCTTGTTC AGCAACCCTGTCTGGGATGGCTCCAAAACCGTGCCCTCGACTCTGGTCAGAAACATCTCGGCCCTCTCGAGCCAA CTTGGCTACGAGGACTTCATCACTAGCAACCTCACTACCCTGAGCACCAACAATGCCCCCAAGCTCGATGGCATC TTTGGCGGCTTACTCTTTGTGCCCCGCATTGACTCGTCCTCGTCCTGCGATGCCCAACAATACGACTTCATCCCC CGCAACGTCACCCGCCGCGAGCAGCTGCCCCCCAGAAACTTCAACATGGTGGCTCTCGCCCCGTGGTTCAGCATT GACTGTGCCAGAGCCTATCTCGACTCTGCCGCCCATAGCCCCGTCCGCGCCCTCATCTTCTTCAAGCCGAACAAT TCAACAAACCGCCCACAGGATGTCGACTCTCCTGTCTGGAGCCTCGACGATGACGGAGCCTGGACCAAGAAGTAT CATTATCCCATCTTTGCCGTCCCCGGCCTCGAGGGCCAAAAAATGATGACACAACTCAGCCTCTACTCTGGCAGT GTCAACCAGGTTCCCCATGGCGAGCAACTCAGCCAACTCTACGGCCCAAATCCTAATGACTTTGTCCGCATATGG ACCGACTTGACCATGGAGAATCAGGCCAACACCCCTGCCGTCTGGGCTTTTGTTCTCATCGTCATAGGCGCTCTG CTCCTCATCATAACCGCCGTCTCCCTAATCATGCACTTTATTCAACGTCGCAATCGCAACTCGCTCAAACGACGT GTCAGGTCTGGCGAGGTTGATCTCGAGGCCATGGGAATCAAGCGTCTCACCGTACCCGCCGCTCACGTTGACACC TTTGCCCTTTTCACCTACAATGCCGAGCCCGACATCACTACTGTACCGCCATCTCCCACTGTCGGAAGCCTGTCC TCAAAGTCGAGAAAACCATCGCGCAAAAGCCGTCGCTCTGATCCGCGCACCTCCAACAAGGACACGCCTCCCACT GCCAGCACTCGCAGCGTCCGCAGCATCCGCAGCAAACGATCTAGCATCACTGGCACAGGCGACACCACGGCCACT AATTTCCAGCCCAATTGCCAGATATGTCTCCTCAGCTTTGAGCACTGCAAAACAATTATTCGTGAACTGCCCTGT GGCCACATTTTCCACCCGCCATGCATTGACGAGTTTCTTACCCAAAACAGCTCTCTCTGTCCAATGTGCAAGCAC TGCATGCTGCCCCAAGGCTACAGTCCCAAAATCACAAATGGCATGGTGCGTCGCGAGCAGGCTGTGCGCCGCCTG AGGGAACGCGTCGACCTCGATAGCTCGTCTCTGGAATCAGGGGAGCCCAAGCTCAAGGAATGGGGCAAGCGTCTA TTCAACTATTCAGGCCATACATCGTGCAGCAAGCCGCCCTCTCCGCCCGACGTGCCCATGGCCTCGCTGCCAGCG ACACAGAATGGAGTCTTGGAGTCGAGTCCGCCAGCGCACAGTCAAGGCAACGACGCTGCCCCGGAAGCACCTTCG CCTACCCTTGGCGATGAAGTTGCTATGGAATCAGCCAGCACCTCGGATCCATCCCAGCCGCCCACGTCAACCAGA ACAGCCCGATGCCGCAAGTTTAAGCCCCGGCCTCTAAATCTTTTACCAACACATCTTGAGGAGTCAGAATCCAAG GAAACGTCAATGGGACGGCTCAGCCCCTCATCCTTTGCTCGCGAGCGCATGCGCCAACTTGCAGCCAAAAATGCG CCAATCGACGATCCGGATCACCAGCGCCCTTATTGGCGTCGAGTGCTATCTAAAGCGTTTCCGGGCTTTTAG
Transcript	>OphauG2\|2476 ATGCCAGCCTTGGCATCACCACGGCTAACCTTTGCTGCAGCGCTCACCGAGATTCGAAATGGCGTACTCTTGTTC AGCAACCCTGTCTGGGATGGCTCCAAAACCGTGCCCTCGACTCTGGTCAGAAACATCTCGGCCCTCTCGAGCCAA CTTGGCTACGAGGACTTCATCACTAGCAACCTCACTACCCTGAGCACCAACAATGCCCCCAAGCTCGATGGCATC TTTGGCGGCTTACTCTTTGTGCCCCGCATTGACTCGTCCTCGTCCTGCGATGCCCAACAATACGACTTCATCCCC CGCAACGTCACCCGCCGCGAGCAGCTGCCCCCCAGAAACTTCAACATGGTGGCTCTCGCCCCGTGGTTCAGCATT GACTGTGCCAGAGCCTATCTCGACTCTGCCGCCCATAGCCCCGTCCGCGCCCTCATCTTCTTCAAGCCGAACAAT TCAACAAACCGCCCACAGGATGTCGACTCTCCTGTCTGGAGCCTCGACGATGACGGAGCCTGGACCAAGAAGTAT CATTATCCCATCTTTGCCGTCCCCGGCCTCGAGGGCCAAAAAATGATGACACAACTCAGCCTCTACTCTGGCAGT GTCAACCAGGTTCCCCATGGCGAGCAACTCAGCCAACTCTACGGCCCAAATCCTAATGACTTTGTCCGCATATGG ACCGACTTGACCATGGAGAATCAGGCCAACACCCCTGCCGTCTGGGCTTTTGTTCTCATCGTCATAGGCGCTCTG CTCCTCATCATAACCGCCGTCTCCCTAATCATGCACTTTATTCAACGTCGCAATCGCAACTCGCTCAAACGACGT GTCAGGTCTGGCGAGGTTGATCTCGAGGCCATGGGAATCAAGCGTCTCACCGTACCCGCCGCTCACGTTGACACC TTTGCCCTTTTCACCTACAATGCCGAGCCCGACATCACTACTGTACCGCCATCTCCCACTGTCGGAAGCCTGTCC TCAAAGTCGAGAAAACCATCGCGCAAAAGCCGTCGCTCTGATCCGCGCACCTCCAACAAGGACACGCCTCCCACT GCCAGCACTCGCAGCGTCCGCAGCATCCGCAGCAAACGATCTAGCATCACTGGCACAGGCGACACCACGGCCACT AATTTCCAGCCCAATTGCCAGATATGTCTCCTCAGCTTTGAGCACTGCAAAACAATTATTCGTGAACTGCCCTGT GGCCACATTTTCCACCCGCCATGCATTGACGAGTTTCTTACCCAAAACAGCTCTCTCTGTCCAATGTGCAAGCAC TGCATGCTGCCCCAAGGCTACAGTCCCAAAATCACAAATGGCATGGTGCGTCGCGAGCAGGCTGTGCGCCGCCTG AGGGAACGCGTCGACCTCGATAGCTCGTCTCTGGAATCAGGGGAGCCCAAGCTCAAGGAATGGGGCAAGCGTCTA TTCAACTATTCAGGCCATACATCGTGCAGCAAGCCGCCCTCTCCGCCCGACGTGCCCATGGCCTCGCTGCCAGCG ACACAGAATGGAGTCTTGGAGTCGAGTCCGCCAGCGCACAGTCAAGGCAACGACGCTGCCCCGGAAGCACCTTCG CCTACCCTTGGCGATGAAGTTGCTATGGAATCAGCCAGCACCTCGGATCCATCCCAGCCGCCCACGTCAACCAGA ACAGCCCGATGCCGCAAGTTTAAGCCCCGGCCTCTAAATCTTTTACCAACACATCTTGAGGAGTCAGAATCCAAG GAAACGTCAATGGGACGGCTCAGCCCCTCATCCTTTGCTCGCGAGCGCATGCGCCAACTTGCAGCCAAAAATGCG CCAATCGACGATCCGGATCACCAGCGCCCTTATTGGCGTCGAGTGCTATCTAAAGCGTTTCCGGGCTTTTAG
Gene	>OphauG2\|2476 ATGCCAGCCTTGGCATCACCACGGCTAACCTTTGCTGCAGCGCTCACCGAGATTCGAAATGGCGTGTACGAGTCT TCCCACTTGGCCAAGCCTGCACAAGGACAAACTGACTTTTGGCCTCGCCAGACTCTTGTTCAGCAACCCTGTCTG GGATGGCTCCAAAACCGTGCCCTCGACTCTGGTCAGAAACATCTCGGCCCTCTCGGTATGCGTCTTCTTGCCAGA CCCTTCGTTGCCTCGACATGCCCGCTGACGCCTGCCATAGAGCCAACTTGGCTACGAGGACTTCATCACTAGCAA CCTCACTACCCTGAGCACCAACAATGCCCCCAAGCTCGATGGCATCTTTGGCGGCTTACTCTTTGTGCCCCGCAT TGACTCGTCCTCGTCCTGCGATGCCCAACAATACGACTTCATCCCCCGCAACGTCACCCGCCGCGAGCAGCTGCC CCCCAGAAACTTCAACATGGTGGCTCTCGCCCCGTGGTTCAGCATTGACTGTGCCAGAGCCTATCTCGACTCTGC CGCCCATAGCCCCGTCCGCGCCCTCATCTTCTTCAAGCCGAACAATTCAACAAACCGCCCACAGGATGTCGACTC TCCTGTCTGGAGCCTCGACGATGACGGAGCCTGGACCAAGAAGTATCATTATCCCATCTTTGCCGTCCCCGGCCT CGAGGGCCAAAAAATGATGACACAACTCAGCCTCTACTCTGGCAGTGTCAACCAGGTTCCCCATGGCGAGCAACT CAGCCAACTCTACGGCCCAAATCCTAATGACTTTGTCCGCATATGGACCGACTTGACCATGGAGAATCAGGCCAA CACCCCTGCCGTCTGGGCTTTTGTTCTCATCGTCATAGGCGCTCTGCTCCTCATCATAACCGCCGTCTCCCTAAT CATGCACTTTATTCAACGTCGCAATCGCAACTCGCTCAAACGACGTGTCAGGTCTGGCGAGGTTGATCTCGAGGC CATGGGAATCAAGCGTCTCACCGTACCCGCCGCTCACGTTGACACCTTTGCCCTTTTCACCTACAATGCCGAGCC CGACATCACTACTGTACCGCCATCTCCCACTGTCGGAAGCCTGTCCTCAAAGTCGAGAAAACCATCGCGCAAAAG CCGTCGCTCTGATCCGCGCACCTCCAACAAGGACACGCCTCCCACTGCCAGCACTCGCAGCGTCCGCAGCATCCG CAGCAAACGATCTAGCATCACTGGCACAGGCGACACCACGGCCACTAATTTCCAGCCCAATTGCCAGATATGTCT CCTCAGCTTTGAGCACTGCAAAACAATTATTCGTGAACTGCCCTGTGGCCACATTTTCCACCCGCCATGCATTGA CGAGTTTCTTACCCAAAACAGCTCTCTCTGTCCAATGTGCAAGCACTGCATGCTGCCCCAAGGCTACAGTCCCAA AATCACAAATGGCATGGTGCGTCGCGAGCAGGCTGTGCGCCGCCTGAGGGAACGCGTCGACCTCGATAGCTCGTC TCTGGAATCAGGGGAGCCCAAGCTCAAGGAATGGGGCAAGCGTCTATTCAACTATTCAGGCCATACATCGTGCAG CAAGCCGCCCTCTCCGCCCGACGTGCCCATGGCCTCGCTGCCAGCGACACAGAATGGAGTCTTGGAGTCGAGTCC GCCAGCGCACAGTCAAGGCAACGACGCTGCCCCGGAAGCACCTTCGCCTACCCTTGGCGATGAAGTTGCTATGGA ATCAGCCAGCACCTCGGATCCATCCCAGCCGCCCACGTCAACCAGAACAGCCCGATGCCGCAAGTTTAAGCCCCG GCCTCTAAATCTTTTACCAACACATCTTGAGGAGTCAGAATCCAAGGAAACGTCAATGGGACGGCTCAGCCCCTC ATCCTTTGCTCGCGAGCGCATGCGCCAACTTGCAGCCAAAAATGCGCCAATCGACGATCCGGATCACCAGCGCCC TTATTGTGAGTCATGTCCCGCCTTTTGATTGGAACACCATGTCTAATCGAGCACGTGTTTAGGGCGTCGAGTGCT ATCTAAAGCGTTTCCGGGCTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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