Protein ID | OphauG2|2436 |
Gene name | |
Location | Contig_1887:514..1937 |
Strand | + |
Gene length (bp) | 1423 |
Transcript length (bp) | 1284 |
Coding sequence length (bp) | 1284 |
Protein length (aa) | 428 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14378 | PAP2_3 | PAP2 superfamily | 6.7E-07 | 161 | 219 |
PF14378 | PAP2_3 | PAP2 superfamily | 1.9E-24 | 232 | 378 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 194 | 213 | 19 |
2 | 247 | 264 | 17 |
3 | 306 | 328 | 22 |
4 | 341 | 363 | 22 |
5 | 368 | 390 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|2436 MAVGAFLEPLVVVTLLFGGAWVNRNKEYNFWGAKQSSGWTDEARVKRSDDVVGLDARRESEDSLLSRDDWSGSST PTLAPSDLSSTRRRKLRFFGYQRLVTTPNTLVFKDRFLSRVLQKFPFLAEAWYWALIYWVYQLGRAFTALSLVEG TVHVARKHALQLIHLEQRLGIFWEVPIQRWFIARPLLMHWTNRIYSFIHIPGTIFFLVFLYYLTTTRKRSMGNAG TKVVAGPALYEARRRTMAMCNLLAFVIFTLWPCMPPRLLSDAEYTGDNAAEAKSYGFVDTVHGADGESSVWTTNR FCNQYAAMPSLHFGYSLLIGLTVATLPVSGLRPMSWKRMAIVAVGMAYPALILIAIVATANHFILDAVAGAVVCG VAWHANELLLNLCIIEDYFLSVLRMHKPVNYTDPDTAVEPELPATLLTSQDV* |
Coding | >OphauG2|2436 ATGGCTGTGGGTGCCTTTCTCGAGCCGCTGGTTGTGGTGACTCTCCTCTTTGGCGGAGCTTGGGTCAACCGCAAC AAGGAGTACAACTTTTGGGGCGCCAAACAGTCATCCGGCTGGACCGACGAGGCTAGAGTAAAACGCAGCGACGAC GTGGTGGGCCTCGACGCCAGACGCGAATCCGAGGACAGCCTTCTGTCGAGAGATGACTGGAGCGGCAGCTCGACG CCCACGCTGGCCCCCAGCGACTTGTCCTCGACGCGCCGCCGCAAGCTGCGATTCTTTGGCTACCAGCGCCTTGTC ACGACGCCAAATACCCTCGTTTTCAAGGACCGATTCCTGAGCCGCGTCTTGCAAAAGTTTCCCTTTCTTGCCGAA GCCTGGTACTGGGCCCTCATTTACTGGGTCTACCAGCTCGGTCGAGCCTTTACCGCCCTGTCGCTCGTCGAGGGA ACGGTCCACGTCGCCCGCAAACACGCGCTCCAGCTCATTCACCTCGAACAGCGCCTCGGCATCTTTTGGGAGGTG CCCATCCAGCGATGGTTCATTGCGCGTCCCCTGCTCATGCACTGGACAAACCGCATCTACTCGTTTATCCATATC CCCGGCACCATCTTCTTCCTCGTCTTCCTCTACTACTTGACGACGACACGCAAGCGGTCAATGGGCAACGCTGGC ACAAAGGTGGTGGCCGGCCCAGCTCTATACGAGGCGCGGCGTCGCACCATGGCCATGTGCAACCTGCTGGCCTTT GTCATCTTCACGCTGTGGCCCTGCATGCCGCCGCGACTGCTGAGCGATGCCGAATACACGGGAGACAATGCCGCA GAGGCCAAGAGCTACGGCTTTGTCGACACGGTGCACGGCGCTGACGGCGAGAGCAGTGTGTGGACGACGAATCGT TTTTGCAATCAATATGCCGCCATGCCGTCGCTACATTTCGGATACTCGCTGCTTATTGGCCTGACGGTTGCCACA CTCCCTGTTTCCGGTCTGCGCCCCATGTCGTGGAAGCGCATGGCTATTGTGGCTGTCGGCATGGCATATCCGGCC CTCATTTTGATAGCCATTGTGGCCACGGCCAATCACTTCATCCTCGACGCTGTTGCGGGCGCTGTCGTGTGCGGT GTGGCGTGGCACGCCAACGAGTTGCTACTCAACCTGTGCATTATCGAGGACTATTTCCTCTCGGTGTTGCGCATG CACAAGCCTGTCAACTACACAGATCCGGATACGGCTGTTGAGCCCGAGCTGCCTGCCACGCTGCTCACGAGCCAA GATGTATAG |
Transcript | >OphauG2|2436 ATGGCTGTGGGTGCCTTTCTCGAGCCGCTGGTTGTGGTGACTCTCCTCTTTGGCGGAGCTTGGGTCAACCGCAAC AAGGAGTACAACTTTTGGGGCGCCAAACAGTCATCCGGCTGGACCGACGAGGCTAGAGTAAAACGCAGCGACGAC GTGGTGGGCCTCGACGCCAGACGCGAATCCGAGGACAGCCTTCTGTCGAGAGATGACTGGAGCGGCAGCTCGACG CCCACGCTGGCCCCCAGCGACTTGTCCTCGACGCGCCGCCGCAAGCTGCGATTCTTTGGCTACCAGCGCCTTGTC ACGACGCCAAATACCCTCGTTTTCAAGGACCGATTCCTGAGCCGCGTCTTGCAAAAGTTTCCCTTTCTTGCCGAA GCCTGGTACTGGGCCCTCATTTACTGGGTCTACCAGCTCGGTCGAGCCTTTACCGCCCTGTCGCTCGTCGAGGGA ACGGTCCACGTCGCCCGCAAACACGCGCTCCAGCTCATTCACCTCGAACAGCGCCTCGGCATCTTTTGGGAGGTG CCCATCCAGCGATGGTTCATTGCGCGTCCCCTGCTCATGCACTGGACAAACCGCATCTACTCGTTTATCCATATC CCCGGCACCATCTTCTTCCTCGTCTTCCTCTACTACTTGACGACGACACGCAAGCGGTCAATGGGCAACGCTGGC ACAAAGGTGGTGGCCGGCCCAGCTCTATACGAGGCGCGGCGTCGCACCATGGCCATGTGCAACCTGCTGGCCTTT GTCATCTTCACGCTGTGGCCCTGCATGCCGCCGCGACTGCTGAGCGATGCCGAATACACGGGAGACAATGCCGCA GAGGCCAAGAGCTACGGCTTTGTCGACACGGTGCACGGCGCTGACGGCGAGAGCAGTGTGTGGACGACGAATCGT TTTTGCAATCAATATGCCGCCATGCCGTCGCTACATTTCGGATACTCGCTGCTTATTGGCCTGACGGTTGCCACA CTCCCTGTTTCCGGTCTGCGCCCCATGTCGTGGAAGCGCATGGCTATTGTGGCTGTCGGCATGGCATATCCGGCC CTCATTTTGATAGCCATTGTGGCCACGGCCAATCACTTCATCCTCGACGCTGTTGCGGGCGCTGTCGTGTGCGGT GTGGCGTGGCACGCCAACGAGTTGCTACTCAACCTGTGCATTATCGAGGACTATTTCCTCTCGGTGTTGCGCATG CACAAGCCTGTCAACTACACAGATCCGGATACGGCTGTTGAGCCCGAGCTGCCTGCCACGCTGCTCACGAGCCAA GATGTATAG |
Gene | >OphauG2|2436 ATGGCTGTGGGTGCCTTTCTCGAGCCGCTGGTTGTGGTGACTCTCCTCTTTGGCGGAGCTTGGGTCAACCGCAAC AAGGAGTACAACTTTTGGGGCGCCAAACAGTCATCCGGCTGGACCGACGAGGCTAGAGTAAAACGCAGCGACGAC GTGGTGGGCCTCGACGCCAGACGCGAATCCGAGGACAGCCTTCTGTCGAGAGATGACTGGAGCGGCAGCTCGACG CCCACGCTGGCCCCCAGCGACTTGTCCTCGACGCGCCGCCGCAAGCTGCGATTCTTTGGCTACCAGCGCCTTGTC ACGACGCCAAATACCCTCGTTTTCAAGGACCGATTCCTGAGCCGCGTCTTGCAAAAGTTTCCCTTTCTTGCCGAA GCCTGGTACTGGGCCCTCATTTACTGGGTAGGTTGTCTTGAGAGCTGTGCTTTCTTTTTTACCCCTGGCCGGTCT GGGTGCGACGCCAGAGCTGACACTGAATGGCTTGCATTAGGTCTACCAGCTCGGTCGAGCCTTTACCGCCCTGTC GCTCGTCGAGGGAACGGTCCACGTCGCCCGCAAACACGCGCTCCAGCTCATTCACCTCGAACAGCGCCTCGGCAT CTTTTGGGAGGTGCCCATCCAGCGATGGTTCATTGCGCGTCCCCTGCTCATGCACTGGACAAACCGCATCTACTC GTTTATCCATATCCCCGGCACCATCTTCTTCCTCGTCTTCCTCTACTACTTGACGACGACACGCAAGCGGTCAAT GGGCAACGCTGGCACAAAGGTGGTGGCCGGCCCAGCTCTATACGAGGCGCGGCGTCGCACCATGGCCATGTGCAA CCTGCTGGCCTTTGTCATCTTCACGCTGTGGCCCTGCATGCCGCCGCGACTGCTGAGCGATGCCGAATACACGGG AGACAATGCCGCAGAGGCCAAGAGCTACGGCTTTGTCGACACGGTGCACGGCGCTGACGGCGAGAGCAGTGTGTG GACGACGAATCGTTTTTGCAATCAATATGGTGCGTAACTAGCTGACGTGTTTTCCGGTCAATTGACTGACGTGTG CATAGCCGCCATGCCGTCGCTACATTTCGGATACTCGCTGCTTATTGGCCTGACGGTTGCCACACTCCCTGTTTC CGGTCTGCGCCCCATGTCGTGGAAGCGCATGGCTATTGTGGCTGTCGGCATGGCATATCCGGCCCTCATTTTGAT AGCCATTGTGGCCACGGCCAATCACTTCATCCTCGACGCTGTTGCGGGCGCTGTCGTGTGCGGTGTGGCGTGGCA CGCCAACGAGTTGCTACTCAACCTGTGCATTATCGAGGACTATTTCCTCTCGGTGTTGCGCATGCACAAGCCTGT CAACTACACAGATCCGGATACGGCTGTTGAGCCCGAGCTGCCTGCCACGCTGCTCACGAGCCAAGATGTATAG |