Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2405
Gene name
LocationContig_1869:1..539
Strand+
Gene length (bp)538
Transcript length (bp)354
Coding sequence length (bp)354
Protein length (aa) 118

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00959 Phage_lysozyme Phage lysozyme 7.1E-09 21 97

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P11187|LYS_BPPH2 Lysozyme OS=Bacillus phage phi29 GN=15 PE=3 SV=1 8 102 2.0E-12
sp|P07540|LYS_BPPZA Lysozyme OS=Bacillus phage PZA GN=15 PE=3 SV=1 8 102 5.0E-12
sp|Q9T1T5|LYS_BPAPS Probable lysozyme OS=Acyrthosiphon pisum secondary endosymbiont phage 1 GN=13 PE=3 SV=1 14 104 3.0E-10
sp|Q37896|LYS_BPB03 Lysozyme OS=Bacillus phage B103 GN=15 PE=3 SV=1 33 99 8.0E-10

GO

GO Term Description Terminal node
GO:0016998 cell wall macromolecule catabolic process Yes
GO:0003796 lysozyme activity Yes
GO:0009253 peptidoglycan catabolic process Yes
GO:0009987 cellular process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0006022 aminoglycan metabolic process No
GO:0009057 macromolecule catabolic process No
GO:0003824 catalytic activity No
GO:0044265 cellular macromolecule catabolic process No
GO:1901565 organonitrogen compound catabolic process No
GO:0000270 peptidoglycan metabolic process No
GO:0009056 catabolic process No
GO:1901136 carbohydrate derivative catabolic process No
GO:0008150 biological_process No
GO:0061783 peptidoglycan muralytic activity No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0016787 hydrolase activity No
GO:0006026 aminoglycan catabolic process No
GO:1901575 organic substance catabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0003674 molecular_function No
GO:0006027 glycosaminoglycan catabolic process No
GO:0030203 glycosaminoglycan metabolic process No
GO:0044036 cell wall macromolecule metabolic process No
GO:0044260 cellular macromolecule metabolic process No
GO:0044248 cellular catabolic process No
GO:0044237 cellular metabolic process No
GO:1901564 organonitrogen compound metabolic process No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2405
MGTCAVLRRVLMSSFLSRLVAQDCIATATGSGVTINANEYGAIVSWAFNVGCPAARSSTLIRRLNRDESPQTVIS
EELPKWNKGNGKVLPGLVRRRRAEVELAEKPTSDPGLPAAGC*
Coding >OphauG2|2405
ATGGGCACCTGTGCCGTACTACGACGTGTTCTGATGTCAAGTTTCCTCAGCCGCTTAGTTGCCCAAGACTGCATC
GCCACAGCCACAGGCTCCGGCGTAACCATCAACGCCAACGAATACGGCGCCATTGTCAGCTGGGCCTTTAATGTC
GGCTGTCCTGCCGCCCGCTCCTCAACCCTCATCCGGCGCCTCAATCGCGACGAATCACCGCAAACCGTCATCTCG
GAAGAACTCCCCAAGTGGAACAAGGGCAATGGCAAGGTGCTTCCAGGGCTTGTGCGTCGGCGTCGGGCAGAGGTT
GAGCTGGCTGAGAAGCCGACTAGTGACCCTGGGCTTCCTGCTGCTGGATGCTGA
Transcript >OphauG2|2405
ATGGGCACCTGTGCCGTACTACGACGTGTTCTGATGTCAAGTTTCCTCAGCCGCTTAGTTGCCCAAGACTGCATC
GCCACAGCCACAGGCTCCGGCGTAACCATCAACGCCAACGAATACGGCGCCATTGTCAGCTGGGCCTTTAATGTC
GGCTGTCCTGCCGCCCGCTCCTCAACCCTCATCCGGCGCCTCAATCGCGACGAATCACCGCAAACCGTCATCTCG
GAAGAACTCCCCAAGTGGAACAAGGGCAATGGCAAGGTGCTTCCAGGGCTTGTGCGTCGGCGTCGGGCAGAGGTT
GAGCTGGCTGAGAAGCCGACTAGTGACCCTGGGCTTCCTGCTGCTGGATGCTGA
Gene >OphauG2|2405
ATGGGCACCTGTGCCGTACTACGACGTGTTCTGATGTCAAGTTTCCTCAGCCGCTTAGTGAGGCGGATGGGGAGA
GGGTGTTGAAGCAGGATCTAAAGGTGCGTTGATGTTTATATACAGGTGTATATGGTCGATGTGATGGGAGGAGAG
AGAGATAGAGACGTTGGATATAGAAAGAGAAAGGGAGATGGGAAAAAAGAAGAGAGAGAGAGATATAGAGAGCTA
AGCCAAACAACTACAGGTTGCCCAAGACTGCATCGCCACAGCCACAGGCTCCGGCGTAACCATCAACGCCAACGA
ATACGGCGCCATTGTCAGCTGGGCCTTTAATGTCGGCTGTCCTGCCGCCCGCTCCTCAACCCTCATCCGGCGCCT
CAATCGCGACGAATCACCGCAAACCGTCATCTCGGAAGAACTCCCCAAGTGGAACAAGGGCAATGGCAAGGTGCT
TCCAGGGCTTGTGCGTCGGCGTCGGGCAGAGGTTGAGCTGGCTGAGAAGCCGACTAGTGACCCTGGGCTTCCTGC
TGCTGGATGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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