© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2397 |
| Gene name | |
| Location | Contig_186:16252..16730 |
| Strand | + |
| Gene length (bp) | 478 |
| Transcript length (bp) | 321 |
| Coding sequence length (bp) | 321 |
| Protein length (aa) | 107 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00887 | ACBP | Acyl CoA binding protein | 1.4E-17 | 7 | 85 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8WN94|ACBP_RABIT | Acyl-CoA-binding protein OS=Oryctolagus cuniculus GN=DBI PE=3 SV=3 | 9 | 93 | 4.0E-15 |
| sp|P45883|ACBP_PELRI | Acyl-CoA-binding protein homolog OS=Pelophylax ridibundus PE=1 SV=2 | 3 | 93 | 1.0E-14 |
| sp|P31824|ACBP_MANSE | Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1 | 7 | 93 | 2.0E-14 |
| sp|P12026|ACBP_PIG | Acyl-CoA-binding protein OS=Sus scrofa GN=DBI PE=1 SV=2 | 9 | 93 | 4.0E-14 |
| sp|Q9PRL8|ACBP_CHICK | Acyl-CoA-binding protein OS=Gallus gallus GN=DBI PE=1 SV=1 | 8 | 93 | 6.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8WN94|ACBP_RABIT | Acyl-CoA-binding protein OS=Oryctolagus cuniculus GN=DBI PE=3 SV=3 | 9 | 93 | 4.0E-15 |
| sp|P45883|ACBP_PELRI | Acyl-CoA-binding protein homolog OS=Pelophylax ridibundus PE=1 SV=2 | 3 | 93 | 1.0E-14 |
| sp|P31824|ACBP_MANSE | Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1 | 7 | 93 | 2.0E-14 |
| sp|P12026|ACBP_PIG | Acyl-CoA-binding protein OS=Sus scrofa GN=DBI PE=1 SV=2 | 9 | 93 | 4.0E-14 |
| sp|Q9PRL8|ACBP_CHICK | Acyl-CoA-binding protein OS=Gallus gallus GN=DBI PE=1 SV=1 | 8 | 93 | 6.0E-14 |
| sp|P82934|ACBP_CHAVI | Acyl-CoA-binding protein OS=Chaetophractus villosus GN=DBI PE=1 SV=2 | 9 | 93 | 1.0E-13 |
| sp|Q9TQX6|ACBP_CANLF | Acyl-CoA-binding protein OS=Canis lupus familiaris GN=DBI PE=1 SV=2 | 9 | 93 | 1.0E-13 |
| sp|Q8N6N7|ACBD7_HUMAN | Acyl-CoA-binding domain-containing protein 7 OS=Homo sapiens GN=ACBD7 PE=1 SV=1 | 9 | 93 | 2.0E-13 |
| sp|P07107|ACBP_BOVIN | Acyl-CoA-binding protein OS=Bos taurus GN=DBI PE=1 SV=2 | 9 | 93 | 3.0E-13 |
| sp|P11030|ACBP_RAT | Acyl-CoA-binding protein OS=Rattus norvegicus GN=Dbi PE=1 SV=3 | 9 | 93 | 8.0E-13 |
| sp|Q9Y7Z3|ACBP_SCHPO | Putative acyl-CoA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1539.06 PE=3 SV=1 | 6 | 93 | 1.0E-12 |
| sp|P07108|ACBP_HUMAN | Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 | 9 | 93 | 2.0E-12 |
| sp|P31786|ACBP_MOUSE | Acyl-CoA-binding protein OS=Mus musculus GN=Dbi PE=1 SV=2 | 9 | 93 | 3.0E-12 |
| sp|Q9D258|ACBD7_MOUSE | Acyl-CoA-binding domain-containing protein 7 OS=Mus musculus GN=Acbd7 PE=3 SV=2 | 9 | 93 | 3.0E-12 |
| sp|P0C8L7|ACBP_HYPDU | Putative acyl-CoA-binding protein OS=Hypsibius dujardini PE=3 SV=1 | 7 | 93 | 1.0E-11 |
| sp|Q3SZF0|ACBD7_BOVIN | Acyl-CoA-binding domain-containing protein 7 OS=Bos taurus GN=ACBD7 PE=3 SV=1 | 9 | 93 | 6.0E-11 |
| sp|P45882|ACBP_ANAPL | Acyl-CoA-binding protein OS=Anas platyrhynchos GN=DBI PE=3 SV=1 | 9 | 93 | 7.0E-11 |
| sp|Q39315|ACBP_BRANA | Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1 | 7 | 88 | 3.0E-10 |
| sp|P42281|ACBP_DROME | Acyl-CoA-binding protein homolog OS=Drosophila melanogaster GN=Dbi PE=2 SV=1 | 6 | 92 | 5.0E-10 |
| sp|O01805|ACBP1_CAEEL | Acyl-CoA-binding protein homolog 1 OS=Caenorhabditis elegans GN=acbp-1 PE=3 SV=1 | 8 | 93 | 1.0E-09 |
| sp|Q5FXM5|ACBP_DICDI | Acyl-CoA-binding protein OS=Dictyostelium discoideum GN=acbA PE=1 SV=1 | 9 | 92 | 2.0E-09 |
| sp|P31787|ACBP_YEAST | Acyl-CoA-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACB1 PE=1 SV=3 | 6 | 93 | 1.0E-07 |
| sp|Q39779|ACBP_GOSHI | Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1 | 7 | 93 | 3.0E-07 |
| sp|P57752|ACBP6_ARATH | Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1 | 7 | 88 | 8.0E-07 |
| sp|P61867|ACBP2_SACPS | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus GN=ACB2 PE=1 SV=2 | 6 | 92 | 1.0E-06 |
| sp|P61868|ACBP2_SACMO | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) GN=ACB2 PE=3 SV=2 | 6 | 92 | 1.0E-06 |
| sp|O09035|DBIL5_MOUSE | Diazepam-binding inhibitor-like 5 OS=Mus musculus GN=Dbil5 PE=1 SV=1 | 9 | 91 | 3.0E-06 |
| sp|O04066|ACBP_RICCO | Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1 | 7 | 88 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000062 | fatty-acyl-CoA binding | Yes |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901681 | sulfur compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0005488 | binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0036094 | small molecule binding | No |
| GO:0033218 | amide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0120227 | acyl-CoA binding | No |
| GO:1901567 | fatty acid derivative binding | No |
| GO:0032553 | ribonucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2397 MSAPQSEAFEKAVVDSKKLTSKPAHGDLLDLYALYKVSTGEDIANAATPGILDMKAKAKYNAWKKVLEAGVTDPK QAQENYVAKVEEMKQKYGYDENKVPEAVGSA* |
| Coding | >OphauG2|2397 ATGTCCGCCCCGCAGAGCGAAGCCTTTGAAAAGGCCGTCGTTGACTCCAAGAAGCTCACGAGCAAGCCCGCCCAT GGCGACCTACTCGATCTCTATGCTCTCTACAAAGTGTCAACTGGCGAGGACATTGCCAATGCAGCCACTCCGGGC ATACTTGACATGAAGGCCAAGGCCAAGTATAATGCCTGGAAAAAGGTGCTCGAAGCTGGCGTCACCGACCCAAAG CAAGCTCAGGAAAACTATGTTGCAAAGGTCGAAGAAATGAAGCAGAAATACGGCTACGACGAAAACAAGGTTCCC GAGGCTGTCGGCTCCGCCTAG |
| Transcript | >OphauG2|2397 ATGTCCGCCCCGCAGAGCGAAGCCTTTGAAAAGGCCGTCGTTGACTCCAAGAAGCTCACGAGCAAGCCCGCCCAT GGCGACCTACTCGATCTCTATGCTCTCTACAAAGTGTCAACTGGCGAGGACATTGCCAATGCAGCCACTCCGGGC ATACTTGACATGAAGGCCAAGGCCAAGTATAATGCCTGGAAAAAGGTGCTCGAAGCTGGCGTCACCGACCCAAAG CAAGCTCAGGAAAACTATGTTGCAAAGGTCGAAGAAATGAAGCAGAAATACGGCTACGACGAAAACAAGGTTCCC GAGGCTGTCGGCTCCGCCTAG |
| Gene | >OphauG2|2397 ATGTCCGCCCCGCAGAGCGAAGCCTTTGAAAAGGCCGTCGTTGACTCCAAGAAGCTCACGAGCAAGCCCGCCCAT GGCGACCTACTCGATCTCTATGGTAGGCAGCCGTCATGAATCACGCCTCGTGTTTGACACCTTTGTACCCACTCG GTATTAAAAATATGGCTATTCTAACAAAACTTGTTGGTTGGCACAGCTCTCTACAAAGTGTCAACTGGCGAGGAC ATTGCCAATGCAGCCACTCCGGGCATACTTGACATGAAGGCAAGATCAACCTACCTCTTTTTGTCCACGACAAAG TTTCTGACAGCCTCGACTGCAGGCCAAGGCCAAGTATAATGCCTGGAAAAAGGTGCTCGAAGCTGGCGTCACCGA CCCAAAGCAAGCTCAGGAAAACTATGTTGCAAAGGTCGAAGAAATGAAGCAGAAATACGGCTACGACGAAAACAA GGTTCCCGAGGCTGTCGGCTCCGCCTAG |