© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2382 |
| Gene name | |
| Location | Contig_185:20553..22598 |
| Strand | + |
| Gene length (bp) | 2045 |
| Transcript length (bp) | 1785 |
| Coding sequence length (bp) | 1785 |
| Protein length (aa) | 595 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.2E-10 | 140 | 513 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.3E-06 | 123 | 314 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q04991|FMP42_YEAST | Protein FMP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP42 PE=1 SV=1 | 68 | 579 | 4.0E-97 |
| sp|Q1JPD8|S43A3_BOVIN | Solute carrier family 43 member 3 OS=Bos taurus GN=SLC43A3 PE=2 SV=1 | 75 | 542 | 8.0E-15 |
| sp|Q8CGA3|LAT4_MOUSE | Large neutral amino acids transporter small subunit 4 OS=Mus musculus GN=Slc43a2 PE=1 SV=1 | 81 | 582 | 1.0E-13 |
| sp|A4IHK6|LAT4_XENTR | Large neutral amino acids transporter small subunit 4 OS=Xenopus tropicalis GN=slc43a2 PE=2 SV=1 | 83 | 569 | 5.0E-13 |
| sp|Q8N370|LAT4_HUMAN | Large neutral amino acids transporter small subunit 4 OS=Homo sapiens GN=SLC43A2 PE=1 SV=1 | 81 | 543 | 4.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q04991|FMP42_YEAST | Protein FMP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP42 PE=1 SV=1 | 68 | 579 | 4.0E-97 |
| sp|Q1JPD8|S43A3_BOVIN | Solute carrier family 43 member 3 OS=Bos taurus GN=SLC43A3 PE=2 SV=1 | 75 | 542 | 8.0E-15 |
| sp|Q8CGA3|LAT4_MOUSE | Large neutral amino acids transporter small subunit 4 OS=Mus musculus GN=Slc43a2 PE=1 SV=1 | 81 | 582 | 1.0E-13 |
| sp|A4IHK6|LAT4_XENTR | Large neutral amino acids transporter small subunit 4 OS=Xenopus tropicalis GN=slc43a2 PE=2 SV=1 | 83 | 569 | 5.0E-13 |
| sp|Q8N370|LAT4_HUMAN | Large neutral amino acids transporter small subunit 4 OS=Homo sapiens GN=SLC43A2 PE=1 SV=1 | 81 | 543 | 4.0E-12 |
| sp|Q8NBI5|S43A3_HUMAN | Solute carrier family 43 member 3 OS=Homo sapiens GN=SLC43A3 PE=1 SV=2 | 75 | 569 | 3.0E-11 |
| sp|O75387|LAT3_HUMAN | Large neutral amino acids transporter small subunit 3 OS=Homo sapiens GN=SLC43A1 PE=1 SV=1 | 83 | 416 | 5.0E-11 |
| sp|Q5RF58|LAT4_PONAB | Large neutral amino acids transporter small subunit 4 OS=Pongo abelii GN=SLC43A2 PE=2 SV=1 | 81 | 543 | 9.0E-10 |
| sp|Q8BSM7|LAT3_MOUSE | Large neutral amino acids transporter small subunit 3 OS=Mus musculus GN=Slc43a1 PE=1 SV=1 | 83 | 416 | 4.0E-09 |
| sp|A2AVZ9|S43A3_MOUSE | Solute carrier family 43 member 3 OS=Mus musculus GN=Slc43a3 PE=1 SV=1 | 76 | 251 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 140 | 162 | 22 |
| 3 | 169 | 186 | 17 |
| 4 | 196 | 218 | 22 |
| 5 | 225 | 247 | 22 |
| 6 | 257 | 279 | 22 |
| 7 | 381 | 403 | 22 |
| 8 | 423 | 443 | 20 |
| 9 | 448 | 465 | 17 |
| 10 | 470 | 492 | 22 |
| 11 | 499 | 521 | 22 |
| 12 | 541 | 560 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2382 MSLAQHLTAQEGVDRNDRIPNGQLEALDSPRWRRMSFDVLAPPEEVQSIFEQDPEPRAAAYIVSAAWRGFQVAFA LASCALASGIVFGFASIKPVLIARGVYNELCRPDGSSETCDETTSWLQSSAQDCRHACPEQDVRLNLLFIVASIT TNVSSLFAGTVLDRHGRRACVTASAVFLALGTGFMAASDPLIGPNGYLVGNFFLSLGGSFLLLPSFQLSNAFPKY SGAIVALVTCAFDSSSAVFLFYRLAWSASGGAFSPTHFFLLYLVVPLAILIGEWTVMPAQPYHIIPELELKLDKA RESDHDFHTSDDDISDDAELLRVRSNRADRRLTEVGQIESLTGNAHERRERAQQEGNRLAASGVWGVLHGLTARE QMKTPWFILLLVFTALQMLRINYFIASIKTQYEYLLGSEREAVLVNRFFDAALPIGGVASTPFIAVVLNNMSVAV MLALLTFYVVLIGLLNCLPYMWAALATVVSFVVFRPFYYSAVSHTATTIFGFATFGRVYGTIIFVSGLFNISQYG LDALTIGPLHGNPTPVNIVIAAVSTVVGVVLTLFVLQKSKSYKQVSLKASSERGSLVSASCANGYGTLH* |
| Coding | >OphauG2|2382 ATGTCCCTGGCCCAGCATCTGACTGCTCAGGAGGGCGTTGATCGCAACGATCGCATCCCCAATGGACAACTCGAG GCCCTTGACTCTCCGCGATGGAGACGCATGAGCTTCGACGTGCTGGCTCCCCCCGAGGAAGTCCAGTCTATATTT GAACAGGATCCCGAACCTCGTGCGGCAGCCTACATCGTCTCGGCCGCCTGGCGAGGCTTCCAAGTAGCATTTGCC CTCGCCTCGTGCGCTCTTGCGTCGGGCATCGTCTTTGGCTTTGCTTCCATCAAGCCCGTCTTGATTGCCCGCGGC GTCTACAACGAGCTATGCCGGCCCGACGGCTCGTCTGAGACATGCGACGAGACTACTAGTTGGCTGCAGTCGTCG GCCCAGGACTGCCGCCATGCCTGCCCAGAGCAAGACGTGCGTCTCAATCTGCTCTTTATTGTAGCCTCCATTACC ACAAATGTCTCGTCCCTGTTTGCGGGAACCGTGCTGGATCGCCACGGCCGCAGGGCCTGCGTCACAGCCAGCGCC GTCTTTCTCGCGCTCGGCACCGGCTTCATGGCGGCCTCGGACCCCTTGATTGGCCCAAACGGCTACCTGGTGGGA AACTTTTTCCTCAGCCTGGGCGGTTCATTCCTTCTCCTGCCCAGCTTCCAGCTGTCCAATGCCTTTCCAAAGTAC TCGGGAGCCATTGTCGCCCTCGTAACGTGCGCCTTTGACTCGTCGTCGGCCGTCTTTCTCTTCTACCGCCTCGCC TGGTCGGCCTCTGGCGGCGCCTTTTCCCCGACGCACTTCTTCCTCCTCTACCTCGTCGTGCCATTGGCCATTTTG ATTGGAGAATGGACCGTCATGCCTGCCCAGCCCTACCACATCATCCCCGAGCTCGAGCTCAAGCTTGACAAGGCC CGCGAGTCGGACCACGACTTTCACACCTCGGACGACGACATTTCAGACGACGCCGAACTCTTGCGAGTCCGCAGC AACCGCGCCGACCGTCGCCTCACCGAAGTCGGCCAAATCGAGAGCCTCACCGGCAACGCCCATGAGCGACGAGAG CGCGCCCAGCAAGAAGGGAATCGCTTGGCCGCCAGCGGTGTCTGGGGCGTGCTTCACGGCCTCACGGCTCGGGAA CAAATGAAGACGCCCTGGTTCATCCTTCTCCTCGTTTTCACCGCGCTGCAGATGCTGCGCATCAACTACTTTATT GCCTCGATTAAAACCCAGTACGAGTATCTCTTGGGCTCGGAGCGCGAGGCCGTCCTGGTCAACCGGTTCTTTGAC GCTGCTCTACCGATAGGCGGTGTTGCATCGACACCCTTTATTGCCGTCGTCTTGAACAATATGAGCGTTGCCGTC ATGCTGGCCCTCCTTACATTTTACGTTGTTCTTATAGGCTTGTTGAACTGTCTCCCGTACATGTGGGCTGCATTG GCCACGGTGGTTAGCTTTGTCGTCTTTCGCCCTTTTTACTACTCGGCCGTCTCGCACACGGCAACCACCATCTTT GGCTTTGCAACATTTGGCCGTGTCTACGGCACCATCATCTTCGTCTCGGGCCTCTTCAACATTTCCCAGTACGGT CTCGACGCCCTCACCATTGGCCCGCTGCACGGAAACCCCACGCCCGTCAACATTGTCATTGCAGCCGTGAGCACC GTTGTCGGCGTTGTGCTGACGCTGTTTGTGCTGCAAAAGAGCAAGAGCTACAAACAGGTGTCGCTCAAGGCAAGC AGCGAGCGAGGAAGCCTGGTGTCGGCGTCGTGCGCCAATGGCTACGGAACACTTCATTGA |
| Transcript | >OphauG2|2382 ATGTCCCTGGCCCAGCATCTGACTGCTCAGGAGGGCGTTGATCGCAACGATCGCATCCCCAATGGACAACTCGAG GCCCTTGACTCTCCGCGATGGAGACGCATGAGCTTCGACGTGCTGGCTCCCCCCGAGGAAGTCCAGTCTATATTT GAACAGGATCCCGAACCTCGTGCGGCAGCCTACATCGTCTCGGCCGCCTGGCGAGGCTTCCAAGTAGCATTTGCC CTCGCCTCGTGCGCTCTTGCGTCGGGCATCGTCTTTGGCTTTGCTTCCATCAAGCCCGTCTTGATTGCCCGCGGC GTCTACAACGAGCTATGCCGGCCCGACGGCTCGTCTGAGACATGCGACGAGACTACTAGTTGGCTGCAGTCGTCG GCCCAGGACTGCCGCCATGCCTGCCCAGAGCAAGACGTGCGTCTCAATCTGCTCTTTATTGTAGCCTCCATTACC ACAAATGTCTCGTCCCTGTTTGCGGGAACCGTGCTGGATCGCCACGGCCGCAGGGCCTGCGTCACAGCCAGCGCC GTCTTTCTCGCGCTCGGCACCGGCTTCATGGCGGCCTCGGACCCCTTGATTGGCCCAAACGGCTACCTGGTGGGA AACTTTTTCCTCAGCCTGGGCGGTTCATTCCTTCTCCTGCCCAGCTTCCAGCTGTCCAATGCCTTTCCAAAGTAC TCGGGAGCCATTGTCGCCCTCGTAACGTGCGCCTTTGACTCGTCGTCGGCCGTCTTTCTCTTCTACCGCCTCGCC TGGTCGGCCTCTGGCGGCGCCTTTTCCCCGACGCACTTCTTCCTCCTCTACCTCGTCGTGCCATTGGCCATTTTG ATTGGAGAATGGACCGTCATGCCTGCCCAGCCCTACCACATCATCCCCGAGCTCGAGCTCAAGCTTGACAAGGCC CGCGAGTCGGACCACGACTTTCACACCTCGGACGACGACATTTCAGACGACGCCGAACTCTTGCGAGTCCGCAGC AACCGCGCCGACCGTCGCCTCACCGAAGTCGGCCAAATCGAGAGCCTCACCGGCAACGCCCATGAGCGACGAGAG CGCGCCCAGCAAGAAGGGAATCGCTTGGCCGCCAGCGGTGTCTGGGGCGTGCTTCACGGCCTCACGGCTCGGGAA CAAATGAAGACGCCCTGGTTCATCCTTCTCCTCGTTTTCACCGCGCTGCAGATGCTGCGCATCAACTACTTTATT GCCTCGATTAAAACCCAGTACGAGTATCTCTTGGGCTCGGAGCGCGAGGCCGTCCTGGTCAACCGGTTCTTTGAC GCTGCTCTACCGATAGGCGGTGTTGCATCGACACCCTTTATTGCCGTCGTCTTGAACAATATGAGCGTTGCCGTC ATGCTGGCCCTCCTTACATTTTACGTTGTTCTTATAGGCTTGTTGAACTGTCTCCCGTACATGTGGGCTGCATTG GCCACGGTGGTTAGCTTTGTCGTCTTTCGCCCTTTTTACTACTCGGCCGTCTCGCACACGGCAACCACCATCTTT GGCTTTGCAACATTTGGCCGTGTCTACGGCACCATCATCTTCGTCTCGGGCCTCTTCAACATTTCCCAGTACGGT CTCGACGCCCTCACCATTGGCCCGCTGCACGGAAACCCCACGCCCGTCAACATTGTCATTGCAGCCGTGAGCACC GTTGTCGGCGTTGTGCTGACGCTGTTTGTGCTGCAAAAGAGCAAGAGCTACAAACAGGTGTCGCTCAAGGCAAGC AGCGAGCGAGGAAGCCTGGTGTCGGCGTCGTGCGCCAATGGCTACGGAACACTTCATTGA |
| Gene | >OphauG2|2382 ATGTCCCTGGCCCAGCATCTGACTGCTCAGGAGGGCGTTGATCGCAACGATCGCATCCCCAATGGACAACTCGAG GCCCTTGACTCTCCGCGATGGAGACGCATGAGCTTCGACGTGCTGGCTCCCCCCGAGGAAGTCCAGTCTATATTT GAACAGGATCCCGAACCTCGTGCGGCAGCCTACATCGTCTCGGCCGCCTGGCGAGGCTGTAAGGTTCATCTATTC CTGCGTCGCATTATGTGTCCTGCTGACTTTTTCATCTCCCCCCCTCCCCTTTTGCTTTGGCCCTCCTTCTAGTCC AAGTAGCATTTGCCCTCGCCTCGTGCGCTCTTGCGTCGGGCATCGTCTTTGGCTTTGCTTCCATCAAGCCCGTCT TGATTGCCCGCGGCGTCTACAACGAGCTATGCCGGCCCGACGGCTCGTCTGAGACATGCGACGAGACTACTAGTT GGCTGCAGTCGTCGGCCCAGGACTGCCGCCATGCCTGCCCAGAGCAAGACGTGCGTCTCAATCTGCTCTTTATTG TAGCCTCCATTACCACAAATGTCTCGTCCCTGTTTGCGGGAACCGTGCTGGATCGCCACGGCCGCAGGGCCTGCG TCACAGCCAGCGCCGTCTTTCTCGCGCTCGGCACCGGCTTCATGGCGGCCTCGGACCCCTTGATTGGCCCAAACG GCTACCTGGTGGGAAACTTTTTCCTCAGCCTGGGCGGTTCATTCCTTCTCCTGCCCAGCTTCCAGCTGTCCAATG CCTTTCCAAAGTACTCGGGAGCCATTGTCGCCCTCGTAACGTGCGCCTTTGACTCGTCGTCGGCCGTCTTTCTCT TCTACCGCCTCGCCTGGTCGGCCTCTGGCGGCGCCTTTTCCCCGACGCACTTCTTCCTCCTCTACCTCGTCGTGC CATTGGCCATTTTGATTGGAGAATGGACCGTCATGCCTGCCCAGCCCTACCACATCATCCCCGAGCTCGAGCTCA AGCTTGACAAGGCCCGCGAGTCGGACCACGACTTTCACACCTCGGACGACGACATTTCAGACGACGCCGAACTCT TGCGAGTCCGCAGCAACCGCGCCGACCGTCGCCTCACCGAAGTCGGCCAAATCGAGAGCCTCACCGGCAACGCCC ATGAGCGACGAGAGCGCGCCCAGCAAGAAGGGAATCGCTTGGCCGCCAGCGGTGTCTGGGGCGTGCTTCACGGCC TCACGGCTCGGGAACAAATGAAGACGCCCTGGTTCATCCTTCTCCTCGTTTTCACCGCGCTGCAGATGCTGCGCA TCAACTACTTTATTGCCTCGATTAAAACCCAGTACGAGTATCTCTTGGGCTCGGAGCGCGAGGCCGTCCTGGTCA ACCGGTTCTTTGACGCTGCTCTACCGATAGGCGGTGTTGCATCGACACCCTTTATTGCCGTCGTCTTGAACAATA TGAGCGTTGCCGTCATGCTGGCCCTCCTTACATTTTACGTTGTTCTTATAGGCTTGTTGAACTGTCTCCCGTACA TGTGGGCTGCATTGGCCACGGTGGTTAGCTTTGTCGTCTTTCGCCCTTTTTACTACTCGGCCGTCTCGTAAGTAA CTTCTTTTTTTTTCCACCCTCTTTTCTCCCCCACGCTTCTTTTCCCCACGCTTCTTTTCCCCACGGGGTGAAAAA AGACGAAACAAGCAAAGAAACAAAACAAAACAAAACTCACCCAAGCCCCCTGCAATACAAAACCGCTAACCCCCT TTTCCTATTCTAGGCACACGGCAACCACCATCTTTGGCTTTGCAACATTTGGCCGTGTCTACGGCACCATCATCT TCGTCTCGGGCCTCTTCAACATTTCCCAGTACGGTCTCGACGCCCTCACCATTGGCCCGCTGCACGGAAACCCCA CGCCCGTCAACATTGTCATTGCAGCCGTGAGCACCGTTGTCGGCGTTGTGCTGACGCTGTTTGTGCTGCAAAAGA GCAAGAGCTACAAACAGGTGTCGCTCAAGGCAAGCAGCGAGCGAGGAAGCCTGGTGTCGGCGTCGTGCGCCAATG GCTACGGAACACTTCATTGA |