© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2282 |
| Gene name | |
| Location | Contig_18:44206..45876 |
| Strand | - |
| Gene length (bp) | 1670 |
| Transcript length (bp) | 1416 |
| Coding sequence length (bp) | 1416 |
| Protein length (aa) | 472 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00892 | EamA | EamA-like transporter family | 1.6E-07 | 213 | 274 |
| PF13127 | DUF3955 | Protein of unknown function (DUF3955) | 4.8E-08 | 68 | 120 |
| PF06027 | SLC35F | Solute carrier family 35 | 6.6E-06 | 213 | 339 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 65 | 461 | 1.0E-76 |
| sp|O94654|YGF3_SCHPO | Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1 | 65 | 444 | 8.0E-53 |
| sp|Q5R6J3|S35F5_PONAB | Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1 | 36 | 443 | 3.0E-51 |
| sp|Q8WV83|S35F5_HUMAN | Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1 | 36 | 443 | 1.0E-50 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 65 | 443 | 6.0E-50 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 65 | 461 | 1.0E-76 |
| sp|O94654|YGF3_SCHPO | Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1 | 65 | 444 | 8.0E-53 |
| sp|Q5R6J3|S35F5_PONAB | Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1 | 36 | 443 | 3.0E-51 |
| sp|Q8WV83|S35F5_HUMAN | Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1 | 36 | 443 | 1.0E-50 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 65 | 443 | 6.0E-50 |
| sp|A6QL92|S35F5_BOVIN | Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1 | 62 | 443 | 6.0E-50 |
| sp|Q4R794|S35F5_MACFA | Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1 | 195 | 443 | 2.0E-44 |
| sp|Q04083|THI74_YEAST | Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1 | 80 | 462 | 1.0E-38 |
| sp|Q8IY50|S35F3_HUMAN | Putative thiamine transporter SLC35F3 OS=Homo sapiens GN=SLC35F3 PE=2 SV=2 | 208 | 410 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 68 | 90 | 22 |
| 2 | 100 | 122 | 22 |
| 3 | 259 | 277 | 18 |
| 4 | 292 | 314 | 22 |
| 5 | 331 | 353 | 22 |
| 6 | 389 | 411 | 22 |
| 7 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2282 MKSPESRRPSDATDARPRPVAAIHPDTANQSSMSMPSMLSSSSASSSGPAPFDKGSLATRLGLTRRALGICLLLV TVCLWTLSNFLASFIFSDHTYNKPFFLVYINTSVFALSLLPLFVKYLLNNGLRALPTDVVHLWRHYKHNRLHMRL PPSQRNQHLGPDNDDDDHDDAIPPASERLMVDDADSVACVFPEPRLGLADTAVLSLEFSMLWFLANYFASACLEH TSVASVTILTSTSSVWTLVFCSLFRVERFSLRKFLGVLASLAGVVFISTVDLTGESDENRGSFPHKTSAQIALGD SMALFSAVIYGLYVTVMKRRVGNEDKVDMRLFFGLVGVFNLVLLWPLFFILHWTGIEPFEMPPTGKIWTIIIVNS LSSFMSDLSWAFSMLLTTPLVVTVGLSLTIPLSLVGEMIQYGQYSSFMYWIGATIVFASFLFVNNESHDEGHEHR SASHSSHEGAERIQASAVAIG* |
| Coding | >OphauG2|2282 ATGAAGTCGCCCGAGTCGCGACGGCCCAGTGATGCCACAGACGCGAGGCCAAGGCCTGTTGCCGCAATCCATCCC GACACGGCCAATCAATCATCCATGAGCATGCCTTCCATGCTCTCGTCTTCCTCTGCTTCGTCCTCCGGCCCCGCG CCCTTTGACAAGGGAAGCCTCGCCACGCGTCTGGGCCTCACTCGCCGCGCCTTGGGCATCTGCCTCTTGCTCGTC ACTGTTTGCCTCTGGACTCTGTCCAACTTCCTGGCCAGTTTCATCTTTTCCGATCACACATACAACAAGCCTTTT TTTCTCGTCTACATAAACACCTCGGTCTTTGCACTGTCCCTGCTGCCTCTCTTCGTCAAATACTTGCTCAACAAC GGCCTGCGCGCCCTGCCCACCGACGTGGTACACTTGTGGCGCCATTACAAGCACAACCGGTTGCACATGCGTCTG CCACCCAGCCAACGCAACCAGCATCTTGGCCCCGACAACGACGACGACGACCATGACGACGCAATCCCCCCCGCC AGCGAGCGCCTCATGGTGGACGACGCCGACAGCGTCGCCTGCGTCTTTCCCGAACCCAGGCTCGGCCTAGCCGAC ACGGCTGTCCTGAGCCTCGAGTTCTCCATGTTGTGGTTCCTGGCAAACTACTTTGCTTCTGCCTGCCTCGAGCAC ACGAGCGTGGCAAGCGTCACCATATTGACCTCGACCAGTAGCGTTTGGACCCTCGTCTTTTGCTCCCTCTTTCGT GTCGAGCGCTTTTCTCTCCGCAAGTTTTTGGGTGTCTTGGCGTCGCTGGCCGGCGTAGTCTTCATCTCCACTGTT GACTTGACGGGCGAGAGCGACGAGAATCGAGGATCCTTTCCTCACAAGACGTCGGCCCAGATTGCTCTGGGAGAC TCAATGGCTCTTTTTAGTGCCGTCATCTATGGGCTGTACGTCACCGTTATGAAGCGCCGAGTTGGCAACGAGGAC AAGGTCGACATGCGTCTCTTTTTTGGCCTCGTCGGTGTCTTCAACCTCGTCCTGCTGTGGCCCCTGTTCTTCATC TTGCATTGGACGGGTATTGAACCGTTTGAAATGCCGCCGACTGGTAAAATCTGGACAATTATTATTGTCAACTCG CTCTCATCATTCATGAGCGACTTGTCATGGGCCTTTTCCATGTTATTGACAACTCCACTCGTTGTCACAGTTGGT CTCTCGCTCACGATTCCCCTGTCGCTGGTGGGTGAGATGATACAGTACGGACAGTACTCAAGCTTCATGTACTGG ATAGGCGCCACCATTGTATTTGCCTCGTTTCTCTTTGTCAACAACGAGAGCCATGACGAGGGGCATGAGCACCGC TCAGCCAGTCATTCCAGTCATGAGGGGGCAGAACGTATACAGGCTTCGGCTGTTGCCATTGGGTAG |
| Transcript | >OphauG2|2282 ATGAAGTCGCCCGAGTCGCGACGGCCCAGTGATGCCACAGACGCGAGGCCAAGGCCTGTTGCCGCAATCCATCCC GACACGGCCAATCAATCATCCATGAGCATGCCTTCCATGCTCTCGTCTTCCTCTGCTTCGTCCTCCGGCCCCGCG CCCTTTGACAAGGGAAGCCTCGCCACGCGTCTGGGCCTCACTCGCCGCGCCTTGGGCATCTGCCTCTTGCTCGTC ACTGTTTGCCTCTGGACTCTGTCCAACTTCCTGGCCAGTTTCATCTTTTCCGATCACACATACAACAAGCCTTTT TTTCTCGTCTACATAAACACCTCGGTCTTTGCACTGTCCCTGCTGCCTCTCTTCGTCAAATACTTGCTCAACAAC GGCCTGCGCGCCCTGCCCACCGACGTGGTACACTTGTGGCGCCATTACAAGCACAACCGGTTGCACATGCGTCTG CCACCCAGCCAACGCAACCAGCATCTTGGCCCCGACAACGACGACGACGACCATGACGACGCAATCCCCCCCGCC AGCGAGCGCCTCATGGTGGACGACGCCGACAGCGTCGCCTGCGTCTTTCCCGAACCCAGGCTCGGCCTAGCCGAC ACGGCTGTCCTGAGCCTCGAGTTCTCCATGTTGTGGTTCCTGGCAAACTACTTTGCTTCTGCCTGCCTCGAGCAC ACGAGCGTGGCAAGCGTCACCATATTGACCTCGACCAGTAGCGTTTGGACCCTCGTCTTTTGCTCCCTCTTTCGT GTCGAGCGCTTTTCTCTCCGCAAGTTTTTGGGTGTCTTGGCGTCGCTGGCCGGCGTAGTCTTCATCTCCACTGTT GACTTGACGGGCGAGAGCGACGAGAATCGAGGATCCTTTCCTCACAAGACGTCGGCCCAGATTGCTCTGGGAGAC TCAATGGCTCTTTTTAGTGCCGTCATCTATGGGCTGTACGTCACCGTTATGAAGCGCCGAGTTGGCAACGAGGAC AAGGTCGACATGCGTCTCTTTTTTGGCCTCGTCGGTGTCTTCAACCTCGTCCTGCTGTGGCCCCTGTTCTTCATC TTGCATTGGACGGGTATTGAACCGTTTGAAATGCCGCCGACTGGTAAAATCTGGACAATTATTATTGTCAACTCG CTCTCATCATTCATGAGCGACTTGTCATGGGCCTTTTCCATGTTATTGACAACTCCACTCGTTGTCACAGTTGGT CTCTCGCTCACGATTCCCCTGTCGCTGGTGGGTGAGATGATACAGTACGGACAGTACTCAAGCTTCATGTACTGG ATAGGCGCCACCATTGTATTTGCCTCGTTTCTCTTTGTCAACAACGAGAGCCATGACGAGGGGCATGAGCACCGC TCAGCCAGTCATTCCAGTCATGAGGGGGCAGAACGTATACAGGCTTCGGCTGTTGCCATTGGGTAG |
| Gene | >OphauG2|2282 ATGAAGTCGCCCGAGTCGCGACGGCCCAGTGATGCCACAGACGCGAGGCCAAGGCCTGTTGCCGCAATCCATCCC GACACGGCCAATCAATCATCCATGAGCATGCCTTCCATGCTCTCGTCTTCCTCTGCTTCGTCCTCCGGCCCCGCG CCCTTTGACAAGGGAAGCCTCGCCACGCGTCTGGGCCTCACTCGCCGCGCCTTGGGCATCTGCCTCTTGCTCGTC ACTGTTTGCCTCTGGACTCTGTCCAACTTCCTGGCCAGTGTAGGCGCTTTTCCCTCCCCCTTTTTCTTTCTTGTC CTTGTTGCCTGCAGCAAAACGCCGACCCCTGCTGACCTTTTTTCTGGTGCAGTTCATCTTTTCCGATCACACATA CAACAAGCCTTTTTTTCTCGTCTACATAAACACCTCGGTCTTTGCACTGTCCCTGCTGCCTCTCTTCGTCAAATA CTTGCTCAACAACGGCCTGCGCGCCCTGCCCACCGACGTGGTACACTTGTGGCGCCATTACAAGCACAACCGGTT GCACATGCGTCTGCCACCCAGCCAACGCAACCAGCATCTTGGCCCCGACAACGACGACGACGACCATGACGACGC AATCCCCCCCGCCAGCGAGCGCCTCATGGTGGACGACGCCGACAGCGTCGCCTGCGTCTTTCCCGAACCCAGGCT CGGCCTAGCCGACACGGCTGTCCTGAGCCTCGAGTTCTCCATGTTGTGGTTCCTGGCAAACTACTTTGCTTCTGC CTGCCTCGAGCACACGAGCGTGGCAAGCGTCACCATATTGACCTCGACCAGTAGCGTTTGGACCCTCGTCTTTTG CTCCCTCTTTCGTGTCGAGCGCTTTTCTCTCCGCAAGTTTTTGGGTGTCTTGGCGTCGCTGGCCGGCGTAGTCTT CATCTCCACTGTTGACTTGACGGGCGAGAGCGACGAGAATCGAGGATCCTTTCCTCACAAGACGTCGGCCCAGAT TGCTCTGGGAGACTCAATGGCTCTTTTTAGTGCCGTCATCTATGGGCTGTACGTCACCGTTATGAAGCGCCGAGT TGGCAACGAGGACAAGGTCGACATGCGTCTCTTTTTTGGCCTCGTCGGTGTCTTCAACCTCGTCCTGCTGTGGCC CCTGTTCTTCATCTTGCATTGGACGGGTATTGAACCGGTCAGTCTTCTCGCACACTCCATGGTGGAGCCTTCTAA AAAAAAAGAATAAAAAAGAGGCGCTAATCAAGTCCATCTTTTTGCAGTTTGAAATGCCGCCGACTGGTAAAATCT GGACAATTATTATTGTAGGCATCCCCTTGGCCCTACGTCACGCATGAGATTTGAACCCATGGTCGTGTGCAGCGC TCCTAACAGCTTTCTTGCAGGTCAACTCGCTCTCATCATTCATGAGCGACTTGTCATGGGCCTTTTCCATGTTAT TGACAACTCCACTCGTTGTCACAGTTGGTCTCTCGCTCACGATTCCCCTGTCGCTGGTGGGTGAGATGATACAGT ACGGACAGTACTCAAGCTTCATGTACTGGATAGGCGCCACCATTGTATTTGCCTCGTTTCTCTTTGTCAACAACG AGAGCCATGACGAGGGGCATGAGCACCGCTCAGCCAGTCATTCCAGTCATGAGGGGGCAGAACGTATACAGGCTT CGGCTGTTGCCATTGGGTAG |