© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2267 |
| Gene name | |
| Location | Contig_18:555..1380 |
| Strand | + |
| Gene length (bp) | 825 |
| Transcript length (bp) | 738 |
| Coding sequence length (bp) | 738 |
| Protein length (aa) | 246 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13419 | HAD_2 | Haloacid dehalogenase-like hydrolase | 4.1E-22 | 7 | 201 |
| PF00702 | Hydrolase | haloacid dehalogenase-like hydrolase | 2.3E-07 | 4 | 190 |
| PF03031 | NIF | NLI interacting factor-like phosphatase | 4.3E-05 | 6 | 220 |
| PF13242 | Hydrolase_like | HAD-hyrolase-like | 3.7E-05 | 158 | 202 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P31467|YIEH_ECOLI | 6-phosphogluconate phosphatase OS=Escherichia coli (strain K12) GN=yieH PE=1 SV=1 | 1 | 202 | 1.0E-11 |
| sp|Q9X0Y1|P1254_THEMA | Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | 4 | 228 | 7.0E-11 |
| sp|Q9ZVJ5|SGGP_ARATH | Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana GN=SGPP PE=1 SV=2 | 4 | 201 | 5.0E-09 |
| sp|Q9JMQ2|PPAX_BACSU | Pyrophosphatase PpaX OS=Bacillus subtilis (strain 168) GN=ppaX PE=1 SV=1 | 3 | 201 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2267 MPQITTLLFDCDNTLVLSEELAFEACAGLINEICAERKLEKRFTGESLIQEFVGQNFRGMLTSLQKEYGIEIAPD DLERYVRMEEDAVIAKLKASLRPCVGADEQLEKLAASKKYLMAVVSSSALRRVRASVEKVGQDKYFPGNVIFSAA TSLEKPTSKPDPAIYLYALEKLGRTARESVAIEDSKSGTLSGTRAGIKVVGYVGPYADNKKAEMEKVLKDAGAVV IMRDWSEFPACLQKIEAGEV* |
| Coding | >OphauG2|2267 ATGCCTCAGATCACGACGCTCCTCTTTGACTGCGACAACACGCTTGTCTTGTCGGAGGAACTTGCATTCGAGGCT TGTGCCGGCCTCATCAACGAGATTTGCGCGGAGCGAAAGCTGGAGAAGCGCTTCACGGGCGAGTCGCTCATCCAG GAGTTTGTCGGCCAAAACTTTCGCGGCATGCTCACTTCGCTGCAAAAGGAGTATGGTATTGAAATCGCCCCCGAC GACTTGGAACGCTACGTTCGCATGGAAGAAGACGCCGTTATTGCAAAGCTCAAGGCATCGCTGCGTCCGTGTGTC GGTGCCGATGAGCAGCTGGAAAAGCTGGCCGCGTCGAAAAAGTATCTAATGGCGGTTGTGTCGTCGTCTGCTTTG CGCCGCGTCCGTGCTTCGGTTGAGAAAGTGGGCCAGGACAAGTACTTTCCGGGAAATGTCATCTTCTCGGCCGCT ACTAGTCTGGAGAAGCCCACGAGCAAGCCCGACCCCGCAATCTACCTTTACGCTCTCGAGAAGCTGGGCCGCACG GCGCGCGAGAGTGTTGCCATTGAGGACAGCAAGAGTGGAACTCTTAGCGGCACTCGAGCCGGTATCAAGGTTGTT GGCTACGTTGGCCCCTATGCCGACAACAAAAAGGCCGAGATGGAAAAGGTGCTCAAGGATGCTGGCGCCGTCGTC ATCATGCGTGACTGGTCCGAGTTTCCTGCCTGCCTGCAAAAGATTGAGGCTGGCGAGGTTTAA |
| Transcript | >OphauG2|2267 ATGCCTCAGATCACGACGCTCCTCTTTGACTGCGACAACACGCTTGTCTTGTCGGAGGAACTTGCATTCGAGGCT TGTGCCGGCCTCATCAACGAGATTTGCGCGGAGCGAAAGCTGGAGAAGCGCTTCACGGGCGAGTCGCTCATCCAG GAGTTTGTCGGCCAAAACTTTCGCGGCATGCTCACTTCGCTGCAAAAGGAGTATGGTATTGAAATCGCCCCCGAC GACTTGGAACGCTACGTTCGCATGGAAGAAGACGCCGTTATTGCAAAGCTCAAGGCATCGCTGCGTCCGTGTGTC GGTGCCGATGAGCAGCTGGAAAAGCTGGCCGCGTCGAAAAAGTATCTAATGGCGGTTGTGTCGTCGTCTGCTTTG CGCCGCGTCCGTGCTTCGGTTGAGAAAGTGGGCCAGGACAAGTACTTTCCGGGAAATGTCATCTTCTCGGCCGCT ACTAGTCTGGAGAAGCCCACGAGCAAGCCCGACCCCGCAATCTACCTTTACGCTCTCGAGAAGCTGGGCCGCACG GCGCGCGAGAGTGTTGCCATTGAGGACAGCAAGAGTGGAACTCTTAGCGGCACTCGAGCCGGTATCAAGGTTGTT GGCTACGTTGGCCCCTATGCCGACAACAAAAAGGCCGAGATGGAAAAGGTGCTCAAGGATGCTGGCGCCGTCGTC ATCATGCGTGACTGGTCCGAGTTTCCTGCCTGCCTGCAAAAGATTGAGGCTGGCGAGGTTTAA |
| Gene | >OphauG2|2267 ATGCCTCAGGTATGGAAAGCCCCCCCCCCTTGGTTTGACTCGTCCCACCCGGGGGGGAGAGAGAGGGGACAAGCA AACGCAACTAAACACAAACAGATCACGACGCTCCTCTTTGACTGCGACAACACGCTTGTCTTGTCGGAGGAACTT GCATTCGAGGCTTGTGCCGGCCTCATCAACGAGATTTGCGCGGAGCGAAAGCTGGAGAAGCGCTTCACGGGCGAG TCGCTCATCCAGGAGTTTGTCGGCCAAAACTTTCGCGGCATGCTCACTTCGCTGCAAAAGGAGTATGGTATTGAA ATCGCCCCCGACGACTTGGAACGCTACGTTCGCATGGAAGAAGACGCCGTTATTGCAAAGCTCAAGGCATCGCTG CGTCCGTGTGTCGGTGCCGATGAGCAGCTGGAAAAGCTGGCCGCGTCGAAAAAGTATCTAATGGCGGTTGTGTCG TCGTCTGCTTTGCGCCGCGTCCGTGCTTCGGTTGAGAAAGTGGGCCAGGACAAGTACTTTCCGGGAAATGTCATC TTCTCGGCCGCTACTAGTCTGGAGAAGCCCACGAGCAAGCCCGACCCCGCAATCTACCTTTACGCTCTCGAGAAG CTGGGCCGCACGGCGCGCGAGAGTGTTGCCATTGAGGACAGCAAGAGTGGAACTCTTAGCGGCACTCGAGCCGGT ATCAAGGTTGTTGGCTACGTTGGCCCCTATGCCGACAACAAAAAGGCCGAGATGGAAAAGGTGCTCAAGGATGCT GGCGCCGTCGTCATCATGCGTGACTGGTCCGAGTTTCCTGCCTGCCTGCAAAAGATTGAGGCTGGCGAGGTTTAA |