Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2233
Gene name
LocationContig_178:13109..14860
Strand+
Gene length (bp)1751
Transcript length (bp)1692
Coding sequence length (bp)1692
Protein length (aa) 564

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00443 UCH Ubiquitin carboxyl-terminal hydrolase 3.2E-49 108 550
PF13423 UCH_1 Ubiquitin carboxyl-terminal hydrolase 2.3E-11 107 524
PF00240 ubiquitin Ubiquitin family 2.8E-11 5 74

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q92353|UBP6_SCHPO Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp6 PE=1 SV=2 4 552 2.0E-133
sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1 4 552 3.0E-93
sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana GN=UBP6 PE=1 SV=1 5 552 7.0E-93
sp|P43593|UBP6_YEAST Ubiquitin carboxyl-terminal hydrolase 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBP6 PE=1 SV=1 8 555 1.0E-84
sp|P40826|UBP14_RABIT Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus GN=USP14 PE=1 SV=3 1 550 2.0E-83
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Swissprot ID Swissprot Description Start End E-value
sp|Q92353|UBP6_SCHPO Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp6 PE=1 SV=2 4 552 2.0E-133
sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1 4 552 3.0E-93
sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana GN=UBP6 PE=1 SV=1 5 552 7.0E-93
sp|P43593|UBP6_YEAST Ubiquitin carboxyl-terminal hydrolase 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBP6 PE=1 SV=1 8 555 1.0E-84
sp|P40826|UBP14_RABIT Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus GN=USP14 PE=1 SV=3 1 550 2.0E-83
sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3 1 550 3.0E-83
sp|P60051|UBP14_PANTR Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes GN=USP14 PE=3 SV=2 1 550 3.0E-83
sp|Q0IIF7|UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus GN=USP14 PE=2 SV=3 1 550 1.0E-82
sp|Q9JMA1|UBP14_MOUSE Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus GN=Usp14 PE=1 SV=3 1 550 1.0E-81
sp|Q17361|UBP14_CAEEL Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans GN=usp-14 PE=2 SV=2 3 561 2.0E-67
sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp16 PE=1 SV=1 83 354 1.0E-10
sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana GN=UBP23 PE=2 SV=2 107 354 4.0E-09
sp|D3ZJ96|UBP28_RAT Ubiquitin carboxyl-terminal hydrolase 28 OS=Rattus norvegicus GN=Usp28 PE=2 SV=2 100 387 3.0E-08
sp|Q96RU2|UBP28_HUMAN Ubiquitin carboxyl-terminal hydrolase 28 OS=Homo sapiens GN=USP28 PE=1 SV=1 100 407 6.0E-08
sp|E1BMF7|UBP13_BOVIN Ubiquitin carboxyl-terminal hydrolase 13 OS=Bos taurus GN=USP13 PE=3 SV=2 108 408 9.0E-08
sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis thaliana GN=UBP11 PE=3 SV=2 89 247 2.0E-07
sp|Q92995|UBP13_HUMAN Ubiquitin carboxyl-terminal hydrolase 13 OS=Homo sapiens GN=USP13 PE=1 SV=2 108 408 2.0E-07
sp|Q5I043|UBP28_MOUSE Ubiquitin carboxyl-terminal hydrolase 28 OS=Mus musculus GN=Usp28 PE=1 SV=1 100 387 3.0E-07
sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana GN=UBP15 PE=2 SV=2 62 352 5.0E-07
sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca fascicularis GN=USP50 PE=2 SV=1 93 359 5.0E-07
sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus GN=Usp21 PE=2 SV=1 82 354 7.0E-07
sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21 PE=1 SV=1 82 354 9.0E-07
sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21 PE=1 SV=1 89 354 1.0E-06
sp|Q5ZID5|UBP28_CHICK Ubiquitin carboxyl-terminal hydrolase 28 OS=Gallus gallus GN=USP28 PE=2 SV=1 100 378 1.0E-06
sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21 PE=2 SV=1 82 354 1.0E-06
sp|E1BY77|UBP13_CHICK Ubiquitin carboxyl-terminal hydrolase 13 OS=Gallus gallus GN=USP13 PE=3 SV=1 108 226 6.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0004843 cysteine-type deubiquitinase activity Yes
GO:0016579 protein deubiquitination Yes
GO:0070647 protein modification by small protein conjugation or removal No
GO:0008234 cysteine-type peptidase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0019538 protein metabolic process No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0070646 protein modification by small protein removal No
GO:0008152 metabolic process No
GO:0043412 macromolecule modification No
GO:0016787 hydrolase activity No
GO:0043170 macromolecule metabolic process No
GO:0005488 binding No
GO:0006807 nitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0036211 protein modification process No
GO:0003674 molecular_function No
GO:0019783 ubiquitin-like protein peptidase activity No
GO:0008233 peptidase activity No
GO:0006508 proteolysis No
GO:0101005 deubiquitinase activity No
GO:1901564 organonitrogen compound metabolic process No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2233
MAPITVAVKHQGKRYDVEVDPSSTGEDFKLQLFSLTDVEPDMQKVLIKGGQLKNDADMGKLGLKSGQTIMMMGTV
ASQRLVRPKEQIKFVEDMSEAEMAKQMDATPAGLINLGNTCYLNSTLQTLRSIPELQATLARYPKSSIDFMMGQT
GEGRIASQLSSLFRILGETQDCMSPTHFLLTLRSVLPQFAEKSRTNDGYAQQDAEEAWSQIIQHIDRNLITDDPS
DDNEVSFVTKYMSGQFASHMACDEEAARIGGEEPIESNVKFFKLDCHIDASTNHLRDGILAGLTQKIEKQSQALD
RDAVYTKTSTIARAPKYLTVHFVRFFWKREAKVKAKIMRKVSFPQELDIVEFCSPELKRALIPVRDKVREIRKDQ
EDIERARKRRKKTHDEVAADIPGAAALPPEKDRKAKGAAGKDKQGSPSADGDTVMEEKYKTDAEFEAEKDASIAE
AKKQLMQLVDEKLHSDQGANQTGLYELRGVVTHQGASADSGHYTAYVKKSAPVDPKTGKVGTEDGMWWWFNDDKV
TEVKADKVEALAGGGESHSALILLYRAVPLPEVPASSD*
Coding >OphauG2|2233
ATGGCACCCATCACTGTGGCAGTCAAGCATCAAGGCAAGCGATACGATGTCGAGGTCGATCCCAGCTCAACAGGC
GAAGACTTCAAACTCCAGCTCTTTAGCCTGACCGACGTGGAGCCGGACATGCAAAAGGTGCTCATCAAGGGCGGC
CAGCTCAAAAACGATGCCGACATGGGCAAGCTCGGTCTCAAGAGCGGCCAAACCATCATGATGATGGGTACTGTC
GCGTCTCAGCGTCTTGTTCGCCCCAAGGAACAGATTAAATTTGTCGAGGACATGAGCGAAGCAGAGATGGCTAAG
CAGATGGACGCCACCCCAGCCGGCCTCATCAACCTTGGAAATACCTGCTACCTCAATTCCACTCTCCAGACACTG
CGCTCCATTCCGGAACTGCAGGCCACGCTCGCAAGATATCCAAAGTCGTCAATAGACTTTATGATGGGACAAACA
GGCGAGGGTCGCATTGCCAGCCAACTTTCGTCTCTATTCCGGATTTTGGGTGAAACCCAGGATTGCATGTCTCCT
ACCCATTTTCTCTTGACTCTGCGTTCTGTGCTCCCCCAATTTGCGGAAAAATCTAGGACCAATGATGGCTACGCC
CAGCAAGACGCCGAGGAGGCGTGGTCGCAAATCATTCAGCACATTGACCGCAACTTGATTACTGACGACCCCAGT
GATGACAATGAGGTGTCCTTTGTCACCAAGTACATGTCTGGACAGTTTGCTTCGCACATGGCTTGTGACGAAGAG
GCGGCCCGCATTGGAGGCGAGGAGCCCATTGAGTCCAATGTCAAATTTTTCAAGCTCGACTGCCATATCGACGCC
TCGACCAATCACCTTCGGGACGGCATCCTGGCAGGCCTGACCCAGAAAATTGAAAAACAATCGCAAGCATTGGAC
CGCGATGCCGTCTACACCAAGACATCGACGATTGCACGAGCCCCCAAGTATCTGACGGTCCATTTTGTGCGCTTT
TTCTGGAAGCGAGAGGCCAAGGTCAAGGCCAAGATTATGCGCAAAGTGTCGTTTCCACAAGAGCTAGACATTGTC
GAATTTTGTTCGCCAGAGCTGAAACGTGCATTGATACCAGTTCGCGACAAGGTGCGGGAGATCCGCAAGGATCAA
GAGGATATTGAGCGAGCGCGTAAGCGCCGTAAGAAGACGCACGACGAGGTGGCAGCCGATATTCCTGGAGCCGCA
GCACTGCCGCCCGAGAAGGACCGCAAGGCCAAGGGCGCGGCCGGAAAAGACAAGCAGGGAAGCCCATCAGCAGAT
GGTGACACTGTCATGGAGGAAAAGTACAAGACTGATGCGGAATTCGAGGCCGAAAAGGATGCCAGTATTGCCGAA
GCTAAGAAGCAACTAATGCAGCTGGTGGATGAAAAGCTGCACAGCGACCAAGGGGCCAACCAGACTGGTCTATAC
GAACTACGTGGTGTTGTGACACATCAAGGAGCCAGTGCCGATAGCGGCCACTATACAGCCTATGTCAAAAAGTCT
GCCCCTGTGGATCCAAAAACGGGCAAGGTGGGCACTGAAGATGGCATGTGGTGGTGGTTCAACGACGACAAGGTA
ACAGAGGTAAAGGCCGACAAGGTGGAGGCTTTGGCTGGCGGCGGCGAGTCGCACTCTGCGCTCATCTTGCTCTAC
AGGGCAGTCCCGCTACCTGAAGTCCCTGCGTCATCTGACTGA
Transcript >OphauG2|2233
ATGGCACCCATCACTGTGGCAGTCAAGCATCAAGGCAAGCGATACGATGTCGAGGTCGATCCCAGCTCAACAGGC
GAAGACTTCAAACTCCAGCTCTTTAGCCTGACCGACGTGGAGCCGGACATGCAAAAGGTGCTCATCAAGGGCGGC
CAGCTCAAAAACGATGCCGACATGGGCAAGCTCGGTCTCAAGAGCGGCCAAACCATCATGATGATGGGTACTGTC
GCGTCTCAGCGTCTTGTTCGCCCCAAGGAACAGATTAAATTTGTCGAGGACATGAGCGAAGCAGAGATGGCTAAG
CAGATGGACGCCACCCCAGCCGGCCTCATCAACCTTGGAAATACCTGCTACCTCAATTCCACTCTCCAGACACTG
CGCTCCATTCCGGAACTGCAGGCCACGCTCGCAAGATATCCAAAGTCGTCAATAGACTTTATGATGGGACAAACA
GGCGAGGGTCGCATTGCCAGCCAACTTTCGTCTCTATTCCGGATTTTGGGTGAAACCCAGGATTGCATGTCTCCT
ACCCATTTTCTCTTGACTCTGCGTTCTGTGCTCCCCCAATTTGCGGAAAAATCTAGGACCAATGATGGCTACGCC
CAGCAAGACGCCGAGGAGGCGTGGTCGCAAATCATTCAGCACATTGACCGCAACTTGATTACTGACGACCCCAGT
GATGACAATGAGGTGTCCTTTGTCACCAAGTACATGTCTGGACAGTTTGCTTCGCACATGGCTTGTGACGAAGAG
GCGGCCCGCATTGGAGGCGAGGAGCCCATTGAGTCCAATGTCAAATTTTTCAAGCTCGACTGCCATATCGACGCC
TCGACCAATCACCTTCGGGACGGCATCCTGGCAGGCCTGACCCAGAAAATTGAAAAACAATCGCAAGCATTGGAC
CGCGATGCCGTCTACACCAAGACATCGACGATTGCACGAGCCCCCAAGTATCTGACGGTCCATTTTGTGCGCTTT
TTCTGGAAGCGAGAGGCCAAGGTCAAGGCCAAGATTATGCGCAAAGTGTCGTTTCCACAAGAGCTAGACATTGTC
GAATTTTGTTCGCCAGAGCTGAAACGTGCATTGATACCAGTTCGCGACAAGGTGCGGGAGATCCGCAAGGATCAA
GAGGATATTGAGCGAGCGCGTAAGCGCCGTAAGAAGACGCACGACGAGGTGGCAGCCGATATTCCTGGAGCCGCA
GCACTGCCGCCCGAGAAGGACCGCAAGGCCAAGGGCGCGGCCGGAAAAGACAAGCAGGGAAGCCCATCAGCAGAT
GGTGACACTGTCATGGAGGAAAAGTACAAGACTGATGCGGAATTCGAGGCCGAAAAGGATGCCAGTATTGCCGAA
GCTAAGAAGCAACTAATGCAGCTGGTGGATGAAAAGCTGCACAGCGACCAAGGGGCCAACCAGACTGGTCTATAC
GAACTACGTGGTGTTGTGACACATCAAGGAGCCAGTGCCGATAGCGGCCACTATACAGCCTATGTCAAAAAGTCT
GCCCCTGTGGATCCAAAAACGGGCAAGGTGGGCACTGAAGATGGCATGTGGTGGTGGTTCAACGACGACAAGGTA
ACAGAGGTAAAGGCCGACAAGGTGGAGGCTTTGGCTGGCGGCGGCGAGTCGCACTCTGCGCTCATCTTGCTCTAC
AGGGCAGTCCCGCTACCTGAAGTCCCTGCGTCATCTGACTGA
Gene >OphauG2|2233
ATGGCACCCATCACTGGTCGGTGCTGCAATCCACTTTCTTCAAGGCTGCCTACTAACGCCGGTCGCGAGCCTTAG
TGGCAGTCAAGCATCAAGGCAAGCGATACGATGTCGAGGTCGATCCCAGCTCAACAGGCGAAGACTTCAAACTCC
AGCTCTTTAGCCTGACCGACGTGGAGCCGGACATGCAAAAGGTGCTCATCAAGGGCGGCCAGCTCAAAAACGATG
CCGACATGGGCAAGCTCGGTCTCAAGAGCGGCCAAACCATCATGATGATGGGTACTGTCGCGTCTCAGCGTCTTG
TTCGCCCCAAGGAACAGATTAAATTTGTCGAGGACATGAGCGAAGCAGAGATGGCTAAGCAGATGGACGCCACCC
CAGCCGGCCTCATCAACCTTGGAAATACCTGCTACCTCAATTCCACTCTCCAGACACTGCGCTCCATTCCGGAAC
TGCAGGCCACGCTCGCAAGATATCCAAAGTCGTCAATAGACTTTATGATGGGACAAACAGGCGAGGGTCGCATTG
CCAGCCAACTTTCGTCTCTATTCCGGATTTTGGGTGAAACCCAGGATTGCATGTCTCCTACCCATTTTCTCTTGA
CTCTGCGTTCTGTGCTCCCCCAATTTGCGGAAAAATCTAGGACCAATGATGGCTACGCCCAGCAAGACGCCGAGG
AGGCGTGGTCGCAAATCATTCAGCACATTGACCGCAACTTGATTACTGACGACCCCAGTGATGACAATGAGGTGT
CCTTTGTCACCAAGTACATGTCTGGACAGTTTGCTTCGCACATGGCTTGTGACGAAGAGGCGGCCCGCATTGGAG
GCGAGGAGCCCATTGAGTCCAATGTCAAATTTTTCAAGCTCGACTGCCATATCGACGCCTCGACCAATCACCTTC
GGGACGGCATCCTGGCAGGCCTGACCCAGAAAATTGAAAAACAATCGCAAGCATTGGACCGCGATGCCGTCTACA
CCAAGACATCGACGATTGCACGAGCCCCCAAGTATCTGACGGTCCATTTTGTGCGCTTTTTCTGGAAGCGAGAGG
CCAAGGTCAAGGCCAAGATTATGCGCAAAGTGTCGTTTCCACAAGAGCTAGACATTGTCGAATTTTGTTCGCCAG
AGCTGAAACGTGCATTGATACCAGTTCGCGACAAGGTGCGGGAGATCCGCAAGGATCAAGAGGATATTGAGCGAG
CGCGTAAGCGCCGTAAGAAGACGCACGACGAGGTGGCAGCCGATATTCCTGGAGCCGCAGCACTGCCGCCCGAGA
AGGACCGCAAGGCCAAGGGCGCGGCCGGAAAAGACAAGCAGGGAAGCCCATCAGCAGATGGTGACACTGTCATGG
AGGAAAAGTACAAGACTGATGCGGAATTCGAGGCCGAAAAGGATGCCAGTATTGCCGAAGCTAAGAAGCAACTAA
TGCAGCTGGTGGATGAAAAGCTGCACAGCGACCAAGGGGCCAACCAGACTGGTCTATACGAACTACGTGGTGTTG
TGACACATCAAGGAGCCAGTGCCGATAGCGGCCACTATACAGCCTATGTCAAAAAGTCTGCCCCTGTGGATCCAA
AAACGGGCAAGGTGGGCACTGAAGATGGCATGTGGTGGTGGTTCAACGACGACAAGGTAACAGAGGTAAAGGCCG
ACAAGGTGGAGGCTTTGGCTGGCGGCGGCGAGTCGCACTCTGCGCTCATCTTGCTCTACAGGGCAGTCCCGCTAC
CTGAAGTCCCTGCGTCATCTGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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