Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2185
Gene name
LocationContig_1752:818..2146
Strand-
Gene length (bp)1328
Transcript length (bp)1224
Coding sequence length (bp)1224
Protein length (aa) 408

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.9E-13 183 252

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74978|YQL5_SCHPO Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.05c PE=3 SV=1 96 293 4.0E-44
sp|Q6GL69|MK67I_XENTR MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=nifk PE=2 SV=1 181 326 1.0E-30
sp|Q8JIY8|MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=nifk PE=2 SV=2 181 341 2.0E-29
sp|Q7SYS2|MK67I_XENLA MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=nifk PE=2 SV=2 181 326 5.0E-28
sp|P53927|NOP15_YEAST Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1 181 258 6.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|O74978|YQL5_SCHPO Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.05c PE=3 SV=1 96 293 4.0E-44
sp|Q6GL69|MK67I_XENTR MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=nifk PE=2 SV=1 181 326 1.0E-30
sp|Q8JIY8|MK67I_DANRE MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=nifk PE=2 SV=2 181 341 2.0E-29
sp|Q7SYS2|MK67I_XENLA MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=nifk PE=2 SV=2 181 326 5.0E-28
sp|P53927|NOP15_YEAST Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP15 PE=1 SV=1 181 258 6.0E-27
sp|Q3SZM1|MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=NIFK PE=2 SV=1 181 276 4.0E-26
sp|Q9BYG3|MK67I_HUMAN MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=NIFK PE=1 SV=1 181 276 3.0E-24
sp|Q5RJM0|MK67I_RAT MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Nifk PE=2 SV=1 181 274 1.0E-22
sp|Q91VE6|MK67I_MOUSE MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus GN=Nifk PE=1 SV=1 180 276 1.0E-22
sp|P25299|RNA15_YEAST mRNA 3'-end-processing protein RNA15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNA15 PE=1 SV=1 182 254 1.0E-07
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1 165 259 2.0E-07
sp|O43040|CTF1_SCHPO Cleavage and termination factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ctf1 PE=1 SV=1 181 244 3.0E-06
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003676 nucleic acid binding No
GO:0097159 organic cyclic compound binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4897
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2185 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|6278
Ophiocordyceps camponoti-floridani Ophcf2|04345
Ophiocordyceps kimflemingae Ophio5|6314
Ophiocordyceps subramaniannii Hirsu2|1294

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2185
MAPELRKRKVLPEAKQDVSTKTKVEGKATTKTKRKAVDEVSPVSLKKQKPAKKTSSQPNKKPAKEAVESKQNQKP
AKKTSSQPNKKPAKAAVESKQPKKTAKPVQITKEEEEIAPKSPVDGSASEDEEDGGVLLLADELDSSDDDATDTT
SLFKPGQDVGNIPAISAEVCKAAIKPAGERGVIYVGRIPHGFYEYEMRQYMSQFGPITRLRLSRNPKTGASRHFA
FIEFEEASTAEIVAKTMNNYLLFGHLLKVKVVPPSELHKDVFKGANTKFKKVPWNKMAGKKLEKPHTKAAWEAKV
GKEQVAREEKLAKLKAIGYEFEAPAFKDVPPPAPKIVESEDQETSAIESAPTLSEAVDGAALPKGQVDQTDKAQE
TETVTTIPPTKTKAKAKAKTSKSTKSKKRAKA*
Coding >OphauG2|2185
ATGGCACCTGAACTCAGGAAACGAAAAGTCCTCCCAGAAGCCAAGCAGGATGTTTCTACAAAAACAAAAGTGGAG
GGAAAAGCGACAACAAAGACCAAGCGAAAAGCTGTCGATGAGGTCTCGCCCGTATCGTTGAAGAAGCAAAAGCCA
GCCAAAAAGACATCGAGCCAGCCCAACAAAAAACCTGCAAAAGAAGCCGTTGAATCCAAGCAGAACCAAAAGCCA
GCCAAAAAGACATCGAGCCAGCCCAACAAAAAGCCTGCAAAAGCAGCCGTTGAATCCAAGCAACCGAAGAAAACT
GCCAAACCAGTCCAAATTACAAAGGAGGAGGAAGAGATCGCTCCAAAGTCTCCCGTGGATGGATCAGCATCCGAG
GACGAAGAAGACGGGGGCGTTTTGCTGCTGGCTGATGAGCTCGACTCGAGCGACGACGATGCTACCGACACCACG
TCCCTGTTCAAGCCCGGGCAGGACGTTGGCAATATACCTGCTATCTCTGCAGAGGTGTGTAAAGCAGCAATAAAG
CCAGCGGGTGAGCGAGGCGTCATTTACGTTGGCCGCATCCCACACGGCTTCTATGAGTACGAAATGAGACAATAC
ATGTCCCAATTTGGCCCCATCACACGGCTTCGACTCTCGCGCAATCCCAAGACGGGTGCAAGCAGGCATTTCGCC
TTTATCGAATTCGAAGAAGCAAGCACAGCCGAAATTGTCGCAAAGACAATGAACAACTACCTGCTCTTTGGGCAT
CTTCTCAAGGTCAAAGTGGTGCCTCCAAGTGAGCTGCACAAGGATGTCTTCAAGGGCGCCAACACCAAGTTCAAA
AAAGTGCCATGGAACAAGATGGCGGGCAAGAAACTGGAGAAGCCGCATACAAAAGCAGCTTGGGAGGCCAAAGTG
GGAAAAGAGCAAGTCGCTCGAGAGGAAAAATTGGCCAAGCTCAAGGCAATTGGCTATGAGTTTGAGGCCCCTGCG
TTCAAAGATGTCCCTCCCCCGGCTCCCAAGATAGTGGAGAGTGAGGACCAGGAGACAAGCGCTATTGAGTCGGCT
CCAACCTTGAGCGAAGCTGTTGATGGGGCGGCTTTGCCCAAAGGTCAGGTCGACCAGACAGACAAGGCACAAGAG
ACAGAGACGGTGACCACAATACCCCCTACAAAGACCAAGGCAAAGGCCAAGGCCAAGACCTCAAAATCTACCAAG
TCGAAGAAGAGGGCAAAGGCCTAA
Transcript >OphauG2|2185
ATGGCACCTGAACTCAGGAAACGAAAAGTCCTCCCAGAAGCCAAGCAGGATGTTTCTACAAAAACAAAAGTGGAG
GGAAAAGCGACAACAAAGACCAAGCGAAAAGCTGTCGATGAGGTCTCGCCCGTATCGTTGAAGAAGCAAAAGCCA
GCCAAAAAGACATCGAGCCAGCCCAACAAAAAACCTGCAAAAGAAGCCGTTGAATCCAAGCAGAACCAAAAGCCA
GCCAAAAAGACATCGAGCCAGCCCAACAAAAAGCCTGCAAAAGCAGCCGTTGAATCCAAGCAACCGAAGAAAACT
GCCAAACCAGTCCAAATTACAAAGGAGGAGGAAGAGATCGCTCCAAAGTCTCCCGTGGATGGATCAGCATCCGAG
GACGAAGAAGACGGGGGCGTTTTGCTGCTGGCTGATGAGCTCGACTCGAGCGACGACGATGCTACCGACACCACG
TCCCTGTTCAAGCCCGGGCAGGACGTTGGCAATATACCTGCTATCTCTGCAGAGGTGTGTAAAGCAGCAATAAAG
CCAGCGGGTGAGCGAGGCGTCATTTACGTTGGCCGCATCCCACACGGCTTCTATGAGTACGAAATGAGACAATAC
ATGTCCCAATTTGGCCCCATCACACGGCTTCGACTCTCGCGCAATCCCAAGACGGGTGCAAGCAGGCATTTCGCC
TTTATCGAATTCGAAGAAGCAAGCACAGCCGAAATTGTCGCAAAGACAATGAACAACTACCTGCTCTTTGGGCAT
CTTCTCAAGGTCAAAGTGGTGCCTCCAAGTGAGCTGCACAAGGATGTCTTCAAGGGCGCCAACACCAAGTTCAAA
AAAGTGCCATGGAACAAGATGGCGGGCAAGAAACTGGAGAAGCCGCATACAAAAGCAGCTTGGGAGGCCAAAGTG
GGAAAAGAGCAAGTCGCTCGAGAGGAAAAATTGGCCAAGCTCAAGGCAATTGGCTATGAGTTTGAGGCCCCTGCG
TTCAAAGATGTCCCTCCCCCGGCTCCCAAGATAGTGGAGAGTGAGGACCAGGAGACAAGCGCTATTGAGTCGGCT
CCAACCTTGAGCGAAGCTGTTGATGGGGCGGCTTTGCCCAAAGGTCAGGTCGACCAGACAGACAAGGCACAAGAG
ACAGAGACGGTGACCACAATACCCCCTACAAAGACCAAGGCAAAGGCCAAGGCCAAGACCTCAAAATCTACCAAG
TCGAAGAAGAGGGCAAAGGCCTAA
Gene >OphauG2|2185
ATGGCACCTGAACTCAGGAAACGAAAAGGTAAATTGCAAATTTCATGCTATGGATATATTTTGCTAACTTGGAAT
AGTCCTCCCAGAAGCCAAGCAGGATGTTTCTACAAAAACAAAAGTGGAGGGAAAAGCGACAACAAAGACCAAGCG
AAAAGGTGAAAGAGACCACACCTTGTAAACTCTCTCGGCTTGCAACTGACCGCCATCTAGCTGTCGATGAGGTCT
CGCCCGTATCGTTGAAGAAGCAAAAGCCAGCCAAAAAGACATCGAGCCAGCCCAACAAAAAACCTGCAAAAGAAG
CCGTTGAATCCAAGCAGAACCAAAAGCCAGCCAAAAAGACATCGAGCCAGCCCAACAAAAAGCCTGCAAAAGCAG
CCGTTGAATCCAAGCAACCGAAGAAAACTGCCAAACCAGTCCAAATTACAAAGGAGGAGGAAGAGATCGCTCCAA
AGTCTCCCGTGGATGGATCAGCATCCGAGGACGAAGAAGACGGGGGCGTTTTGCTGCTGGCTGATGAGCTCGACT
CGAGCGACGACGATGCTACCGACACCACGTCCCTGTTCAAGCCCGGGCAGGACGTTGGCAATATACCTGCTATCT
CTGCAGAGGTGTGTAAAGCAGCAATAAAGCCAGCGGGTGAGCGAGGCGTCATTTACGTTGGCCGCATCCCACACG
GCTTCTATGAGTACGAAATGAGACAATACATGTCCCAATTTGGCCCCATCACACGGCTTCGACTCTCGCGCAATC
CCAAGACGGGTGCAAGCAGGCATTTCGCCTTTATCGAATTCGAAGAAGCAAGCACAGCCGAAATTGTCGCAAAGA
CAATGAACAACTACCTGCTCTTTGGGCATCTTCTCAAGGTCAAAGTGGTGCCTCCAAGTGAGCTGCACAAGGATG
TCTTCAAGGGCGCCAACACCAAGTTCAAAAAAGTGCCATGGAACAAGATGGCGGGCAAGAAACTGGAGAAGCCGC
ATACAAAAGCAGCTTGGGAGGCCAAAGTGGGAAAAGAGCAAGTCGCTCGAGAGGAAAAATTGGCCAAGCTCAAGG
CAATTGGCTATGAGTTTGAGGCCCCTGCGTTCAAAGATGTCCCTCCCCCGGCTCCCAAGATAGTGGAGAGTGAGG
ACCAGGAGACAAGCGCTATTGAGTCGGCTCCAACCTTGAGCGAAGCTGTTGATGGGGCGGCTTTGCCCAAAGGTC
AGGTCGACCAGACAGACAAGGCACAAGAGACAGAGACGGTGACCACAATACCCCCTACAAAGACCAAGGCAAAGG
CCAAGGCCAAGACCTCAAAATCTACCAAGTCGAAGAAGAGGGCAAAGGCCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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