Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|2175
Gene name
LocationContig_175:3631..4848
Strand+
Gene length (bp)1217
Transcript length (bp)1155
Coding sequence length (bp)1155
Protein length (aa) 385

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 6.2E-17 11 82
PF04116 FA_hydroxylase Fatty acid hydroxylase 6.1E-13 232 375

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q03529|SCS7_YEAST Ceramide very long chain fatty acid hydroxylase SCS7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCS7 PE=1 SV=1 3 377 4.0E-131
sp|O13846|SCS7_SCHPO Ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19G12.08 PE=3 SV=1 16 376 3.0E-100
sp|Q5MPP0|FA2H_MOUSE Fatty acid 2-hydroxylase OS=Mus musculus GN=Fa2h PE=1 SV=1 8 375 3.0E-50
sp|Q2LAM0|FA2H_RAT Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2 8 375 6.0E-50
sp|Q4R4P4|FA2H_MACFA Fatty acid 2-hydroxylase OS=Macaca fascicularis GN=FA2H PE=2 SV=1 13 375 7.0E-48
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Swissprot ID Swissprot Description Start End E-value
sp|Q03529|SCS7_YEAST Ceramide very long chain fatty acid hydroxylase SCS7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCS7 PE=1 SV=1 3 377 4.0E-131
sp|O13846|SCS7_SCHPO Ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19G12.08 PE=3 SV=1 16 376 3.0E-100
sp|Q5MPP0|FA2H_MOUSE Fatty acid 2-hydroxylase OS=Mus musculus GN=Fa2h PE=1 SV=1 8 375 3.0E-50
sp|Q2LAM0|FA2H_RAT Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2 8 375 6.0E-50
sp|Q4R4P4|FA2H_MACFA Fatty acid 2-hydroxylase OS=Macaca fascicularis GN=FA2H PE=2 SV=1 13 375 7.0E-48
sp|Q7L5A8|FA2H_HUMAN Fatty acid 2-hydroxylase OS=Homo sapiens GN=FA2H PE=1 SV=1 13 375 1.0E-47
sp|O48916|FAH1_ARATH Fatty acid 2-hydroxylase 1 OS=Arabidopsis thaliana GN=FAH1 PE=1 SV=1 149 375 2.0E-46
sp|Q9SUC5|FAH2_ARATH Fatty acid 2-hydroxylase 2 OS=Arabidopsis thaliana GN=FAH2 PE=1 SV=1 149 375 8.0E-45
sp|Q9ZWT2|CYB5D_ARATH Cytochrome B5 isoform D OS=Arabidopsis thaliana GN=CYTB5-D PE=1 SV=1 12 89 9.0E-10
sp|P49099|CYB5S_TOBAC Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1 12 82 4.0E-09
sp|P49098|CYB5_TOBAC Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1 12 84 5.0E-09
sp|P36841|NIA_VOLCA Nitrate reductase [NADH] OS=Volvox carteri GN=NITA PE=2 SV=1 13 124 2.0E-08
sp|Q9V4N3|CYB5_DROME Cytochrome b5 OS=Drosophila melanogaster GN=Cyt-b5 PE=2 SV=1 1 107 2.0E-08
sp|O94391|CYB51_SCHPO Probable cytochrome b5 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A10.16c PE=3 SV=1 13 86 3.0E-08
sp|O04354|CYB5_BOROF Cytochrome b5 OS=Borago officinalis PE=2 SV=1 12 84 4.0E-08
sp|P49097|CYB5_CUSRE Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1 10 84 4.0E-08
sp|Q42342|CYB5E_ARATH Cytochrome b5 isoform E OS=Arabidopsis thaliana GN=CYTB5-E PE=1 SV=2 9 102 5.0E-08
sp|O48845|CYB5B_ARATH Cytochrome b5 isoform B OS=Arabidopsis thaliana GN=CYTB5-B PE=1 SV=1 12 86 2.0E-07
sp|Q9HFV1|CYB5_RHIST Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1 5 82 2.0E-07
sp|P32953|CYBL_RHOGR (S)-mandelate dehydrogenase, mitochondrial OS=Rhodotorula graminis PE=1 SV=2 8 99 3.0E-07
sp|Q9USM6|CYB52_SCHPO Probable cytochrome b5 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oca8 PE=3 SV=1 8 100 5.0E-07
sp|Q10352|YDAA_SCHPO Uncharacterized protein C1F12.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F12.10c PE=3 SV=1 9 85 5.0E-07
sp|P49096|CYB5_MUSDO Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1 1 88 7.0E-07
sp|Q9P5L0|CYB5_NEUCR Probable cytochrome b5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B23L21.190 PE=3 SV=2 13 82 8.0E-07
sp|Q874I5|CYB5_CANTR Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1 10 92 9.0E-07
sp|Q9Y706|CYB5_MORAP Cytochrome b5 OS=Mortierella alpina PE=1 SV=1 6 110 1.0E-06
sp|P40934|CYB5_BRAOB Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1 13 84 2.0E-06
sp|P49100|CYB5_ORYSJ Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2 13 84 2.0E-06
sp|Q9FDW8|CYB5A_ARATH Cytochrome b5 isoform A OS=Arabidopsis thaliana GN=CB5-A PE=1 SV=1 6 82 3.0E-06
sp|P82291|CYB5_ECTSH Soluble cytochrome b558 OS=Ectothiorhodospira shaposhnikovii PE=1 SV=2 5 82 3.0E-06
sp|Q01170|NIA_CHLVU Nitrate reductase [NADH] (Fragment) OS=Chlorella vulgaris PE=2 SV=1 8 108 7.0E-06
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GO

GO Term Description Terminal node
GO:0008610 lipid biosynthetic process Yes
GO:0016491 oxidoreductase activity Yes
GO:0005506 iron ion binding Yes
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:0071704 organic substance metabolic process No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0046872 metal ion binding No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0044238 primary metabolic process No
GO:0006629 lipid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 200 222 22
2 229 251 22
3 284 306 22
4 313 335 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|2175
MPSRTLPTLSRAEVEAHASAKSCFVTLGTKVYDVTDFIGHHPGGGQLILDYAGKDIEAILKDPTSHPHSEAAYQV
LDESLVGFVVPEKAVAAGGCANTQSPSASVASSDTTVAAEDSASFVHPRTGMSCEEDLSKETDFSLDYKKHQFLD
LSRPLFPQIWFGGFSKEFYLDQVHRPRHYKGGDSAPLFGNFLEPLSKTPWWLVPTIWVPCVAYGLYVANLGLGDV
SVTAAYFVFGIFFWTFVEYCMHRFLFHLDDYLPDNRVGITAHFLLHGIHHYLPMDKYRLVMPPTLFVVLAAPFWK
LSQFVFYRNWYAAMAVYCGGVFGYICYDLTHYFLHHENLPLWYKQLKKYHLQHHFLDYELGFGVTSKFWDKVFGT
ELQALVKVQ*
Coding >OphauG2|2175
ATGCCGTCGAGAACGCTACCGACCTTGAGCCGCGCCGAGGTGGAAGCCCATGCCTCTGCAAAGTCGTGTTTTGTC
ACCTTGGGCACAAAGGTGTACGATGTCACTGATTTCATAGGTCATCACCCCGGCGGCGGCCAGCTCATCCTCGAC
TACGCCGGCAAGGATATCGAGGCCATACTCAAGGATCCGACGTCGCACCCTCACTCTGAAGCCGCCTACCAAGTT
CTCGACGAATCTCTCGTTGGGTTTGTCGTGCCTGAAAAAGCCGTTGCTGCCGGCGGCTGCGCAAATACACAGTCA
CCCTCGGCTTCTGTAGCAAGCAGCGACACTACTGTCGCCGCTGAGGATTCGGCTTCTTTTGTCCATCCGCGGACC
GGCATGTCTTGTGAAGAAGATTTATCAAAAGAGACTGATTTCAGTCTCGACTACAAGAAACACCAGTTCCTGGAC
CTCAGTCGCCCTCTCTTTCCGCAGATATGGTTTGGCGGTTTCTCCAAGGAATTCTATCTCGACCAAGTCCACCGA
CCGCGCCACTACAAGGGCGGCGACTCTGCCCCTCTCTTTGGAAACTTTCTCGAGCCCCTCAGTAAGACGCCATGG
TGGCTTGTTCCCACCATCTGGGTGCCTTGCGTTGCCTATGGTCTTTACGTGGCCAACCTTGGACTTGGTGACGTC
TCCGTCACGGCTGCTTACTTTGTGTTTGGTATCTTTTTCTGGACTTTTGTGGAATACTGCATGCACCGCTTCCTG
TTCCACCTCGATGATTACTTGCCTGACAACAGAGTGGGAATCACTGCACACTTTTTGCTTCACGGGATTCATCAT
TATCTTCCCATGGACAAGTATCGCCTTGTGATGCCACCAACCCTTTTTGTCGTCTTGGCGGCTCCTTTCTGGAAG
CTGTCACAATTCGTATTTTACCGCAATTGGTACGCTGCCATGGCCGTGTACTGTGGCGGCGTCTTTGGCTATATA
TGTTACGACCTGACGCACTACTTCCTTCACCACGAAAACCTGCCTCTCTGGTATAAACAGCTTAAAAAGTACCAT
TTGCAACATCACTTCCTCGACTATGAACTTGGCTTCGGCGTCACAAGCAAGTTCTGGGACAAGGTTTTTGGCACA
GAGCTGCAAGCTCTGGTCAAAGTGCAGTAA
Transcript >OphauG2|2175
ATGCCGTCGAGAACGCTACCGACCTTGAGCCGCGCCGAGGTGGAAGCCCATGCCTCTGCAAAGTCGTGTTTTGTC
ACCTTGGGCACAAAGGTGTACGATGTCACTGATTTCATAGGTCATCACCCCGGCGGCGGCCAGCTCATCCTCGAC
TACGCCGGCAAGGATATCGAGGCCATACTCAAGGATCCGACGTCGCACCCTCACTCTGAAGCCGCCTACCAAGTT
CTCGACGAATCTCTCGTTGGGTTTGTCGTGCCTGAAAAAGCCGTTGCTGCCGGCGGCTGCGCAAATACACAGTCA
CCCTCGGCTTCTGTAGCAAGCAGCGACACTACTGTCGCCGCTGAGGATTCGGCTTCTTTTGTCCATCCGCGGACC
GGCATGTCTTGTGAAGAAGATTTATCAAAAGAGACTGATTTCAGTCTCGACTACAAGAAACACCAGTTCCTGGAC
CTCAGTCGCCCTCTCTTTCCGCAGATATGGTTTGGCGGTTTCTCCAAGGAATTCTATCTCGACCAAGTCCACCGA
CCGCGCCACTACAAGGGCGGCGACTCTGCCCCTCTCTTTGGAAACTTTCTCGAGCCCCTCAGTAAGACGCCATGG
TGGCTTGTTCCCACCATCTGGGTGCCTTGCGTTGCCTATGGTCTTTACGTGGCCAACCTTGGACTTGGTGACGTC
TCCGTCACGGCTGCTTACTTTGTGTTTGGTATCTTTTTCTGGACTTTTGTGGAATACTGCATGCACCGCTTCCTG
TTCCACCTCGATGATTACTTGCCTGACAACAGAGTGGGAATCACTGCACACTTTTTGCTTCACGGGATTCATCAT
TATCTTCCCATGGACAAGTATCGCCTTGTGATGCCACCAACCCTTTTTGTCGTCTTGGCGGCTCCTTTCTGGAAG
CTGTCACAATTCGTATTTTACCGCAATTGGTACGCTGCCATGGCCGTGTACTGTGGCGGCGTCTTTGGCTATATA
TGTTACGACCTGACGCACTACTTCCTTCACCACGAAAACCTGCCTCTCTGGTATAAACAGCTTAAAAAGTACCAT
TTGCAACATCACTTCCTCGACTATGAACTTGGCTTCGGCGTCACAAGCAAGTTCTGGGACAAGGTTTTTGGCACA
GAGCTGCAAGCTCTGGTCAAAGTGCAGTAA
Gene >OphauG2|2175
ATGCCGTCGAGAACGCTACCGACCTTGAGCCGCGCCGAGGTGGAAGCCCATGCCTCTGCAAAGTCGTGTTTTGTC
ACCTTGGGCACAAAGGTGTACGATGTCACTGATTTCATAGGTCATCACCCCGGCGGCGGCCAGCTCATCCTCGAC
TACGCCGGCAAGGATATCGAGGCCATACTCAAGGATCCGACGTCGCACCCTCACTCTGAAGCCGCCTACCAAGTT
CTCGACGAATCTCTCGTTGGGTTTGTCGTGCCTGAAAAAGCCGTTGCTGCCGGCGGCTGCGCAAATACACAGTCA
CCCTCGGCTTCTGTAGCAAGCAGCGACACTACTGTCGCCGCTGAGGATTCGGCTTCTTTTGTCCATCCGCGGACC
GGCATGTCTTGTGAAGAAGATTTATCAAAAGAGACTGATTTCAGTCTCGACTACAAGAAACACCAGTTCCTGGAC
CTCAGTCGCCCTCTCTTTCCGCAGATATGGTTTGGCGGTTTCTCCAAGGAATTCTATCTCGACCAAGTCCACCGA
CCGCGCCACTACAAGGGCGGCGACTCTGCCCCTCTCTTTGGAAACTTTCTCGAGCCCCTCAGTAAGACGCCATGG
TGGCTTGTTCCCACCATCTGGGTGCCTTGCGTTGCCTATGGTCTTTACGTGGCCAACCTTGGACTTGGTGACGTC
TCCGTCACGGCTGCTTACTTTGTGTTTGGTATCTTTTTCTGGACTTTTGTGGAATACTGCATGCACCGCTTCCTG
TTCCACCTCGATGAGTACGCTAGCGATTGCCAAACATGCTCCGCTGCTTGCGCCAGCCGCTGACTTGATTCCATA
GTTACTTGCCTGACAACAGAGTGGGAATCACTGCACACTTTTTGCTTCACGGGATTCATCATTATCTTCCCATGG
ACAAGTATCGCCTTGTGATGCCACCAACCCTTTTTGTCGTCTTGGCGGCTCCTTTCTGGAAGCTGTCACAATTCG
TATTTTACCGCAATTGGTACGCTGCCATGGCCGTGTACTGTGGCGGCGTCTTTGGCTATATATGTTACGACCTGA
CGCACTACTTCCTTCACCACGAAAACCTGCCTCTCTGGTATAAACAGCTTAAAAAGTACCATTTGCAACATCACT
TCCTCGACTATGAACTTGGCTTCGGCGTCACAAGCAAGTTCTGGGACAAGGTTTTTGGCACAGAGCTGCAAGCTC
TGGTCAAAGTGCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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