© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|210 |
| Gene name | |
| Location | Contig_104:18961..19879 |
| Strand | - |
| Gene length (bp) | 918 |
| Transcript length (bp) | 918 |
| Coding sequence length (bp) | 918 |
| Protein length (aa) | 306 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01040 | UbiA | UbiA prenyltransferase family | 3.7E-16 | 35 | 279 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 27 | 46 | 19 |
| 2 | 53 | 75 | 22 |
| 3 | 118 | 140 | 22 |
| 4 | 242 | 264 | 22 |
| 5 | 279 | 301 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|210 MGPLHLFHQARHHAYSIWLFTRSDIKTIILPSLLFSLLTAPALALFDMATPSLALVRRLPLTLFWIWINLLPFAI DNQRQADAIAEDGINKPWRTLPSRRMTPRQATVLMCFLYPTAVASSLVLGGLEQCLCLIALGFWYNDLRGADNGF VIRQVINAAGFNRFATGALAVLLGDKQQLIQTRSFVIWQLILAGIVSTTVQTQDMYDQEGDAKRGRHTVPLDLGD GLARWTIAVPMVLWCTFCPLFIACPLIGFAISISMGSIIALRCLVFRSVASDKVTFIMWNSWLVSIYSLPLLTVA LNRAS* |
| Coding | >OphauG2|210 ATGGGTCCTTTGCATCTTTTCCATCAAGCCCGCCATCACGCCTATTCAATATGGCTCTTTACCCGCAGCGACATC AAGACCATTATCCTCCCCAGCCTGCTCTTCTCTCTCTTGACCGCCCCAGCGCTGGCCTTGTTCGACATGGCCACG CCTTCACTTGCCCTTGTTCGCCGGCTGCCCCTCACATTGTTCTGGATATGGATCAACCTCCTTCCCTTTGCCATT GACAACCAACGCCAGGCAGATGCTATAGCCGAAGACGGCATCAACAAGCCCTGGCGCACTCTGCCCTCACGCCGC ATGACACCTCGTCAGGCAACAGTCCTCATGTGTTTTCTCTACCCAACCGCGGTCGCCTCCAGCCTTGTCCTTGGC GGCCTTGAGCAGTGTCTTTGTCTAATAGCCCTTGGCTTCTGGTACAATGATCTCCGTGGCGCTGATAACGGCTTC GTCATCCGTCAAGTCATCAACGCCGCGGGCTTTAACCGCTTTGCCACTGGTGCTCTGGCCGTTCTTCTTGGCGAC AAGCAGCAGTTGATACAAACACGGTCCTTTGTAATTTGGCAGCTCATTCTGGCCGGCATTGTCTCCACCACAGTC CAGACCCAGGACATGTACGACCAAGAGGGGGATGCTAAGCGAGGCCGTCACACCGTTCCCTTGGATCTTGGGGAT GGGTTGGCTCGCTGGACCATTGCCGTGCCCATGGTCCTTTGGTGCACCTTTTGTCCCTTGTTCATCGCCTGCCCT TTGATTGGCTTCGCCATTTCCATTTCAATGGGCTCCATCATCGCGCTTCGATGCCTCGTATTTAGGAGCGTGGCG TCTGACAAAGTTACATTCATCATGTGGAATTCGTGGCTGGTTTCCATATACTCACTGCCACTCTTGACGGTAGCT TTGAACCGAGCGTCATGA |
| Transcript | >OphauG2|210 ATGGGTCCTTTGCATCTTTTCCATCAAGCCCGCCATCACGCCTATTCAATATGGCTCTTTACCCGCAGCGACATC AAGACCATTATCCTCCCCAGCCTGCTCTTCTCTCTCTTGACCGCCCCAGCGCTGGCCTTGTTCGACATGGCCACG CCTTCACTTGCCCTTGTTCGCCGGCTGCCCCTCACATTGTTCTGGATATGGATCAACCTCCTTCCCTTTGCCATT GACAACCAACGCCAGGCAGATGCTATAGCCGAAGACGGCATCAACAAGCCCTGGCGCACTCTGCCCTCACGCCGC ATGACACCTCGTCAGGCAACAGTCCTCATGTGTTTTCTCTACCCAACCGCGGTCGCCTCCAGCCTTGTCCTTGGC GGCCTTGAGCAGTGTCTTTGTCTAATAGCCCTTGGCTTCTGGTACAATGATCTCCGTGGCGCTGATAACGGCTTC GTCATCCGTCAAGTCATCAACGCCGCGGGCTTTAACCGCTTTGCCACTGGTGCTCTGGCCGTTCTTCTTGGCGAC AAGCAGCAGTTGATACAAACACGGTCCTTTGTAATTTGGCAGCTCATTCTGGCCGGCATTGTCTCCACCACAGTC CAGACCCAGGACATGTACGACCAAGAGGGGGATGCTAAGCGAGGCCGTCACACCGTTCCCTTGGATCTTGGGGAT GGGTTGGCTCGCTGGACCATTGCCGTGCCCATGGTCCTTTGGTGCACCTTTTGTCCCTTGTTCATCGCCTGCCCT TTGATTGGCTTCGCCATTTCCATTTCAATGGGCTCCATCATCGCGCTTCGATGCCTCGTATTTAGGAGCGTGGCG TCTGACAAAGTTACATTCATCATGTGGAATTCGTGGCTGGTTTCCATATACTCACTGCCACTCTTGACGGTAGCT TTGAACCGAGCGTCATGA |
| Gene | >OphauG2|210 ATGGGTCCTTTGCATCTTTTCCATCAAGCCCGCCATCACGCCTATTCAATATGGCTCTTTACCCGCAGCGACATC AAGACCATTATCCTCCCCAGCCTGCTCTTCTCTCTCTTGACCGCCCCAGCGCTGGCCTTGTTCGACATGGCCACG CCTTCACTTGCCCTTGTTCGCCGGCTGCCCCTCACATTGTTCTGGATATGGATCAACCTCCTTCCCTTTGCCATT GACAACCAACGCCAGGCAGATGCTATAGCCGAAGACGGCATCAACAAGCCCTGGCGCACTCTGCCCTCACGCCGC ATGACACCTCGTCAGGCAACAGTCCTCATGTGTTTTCTCTACCCAACCGCGGTCGCCTCCAGCCTTGTCCTTGGC GGCCTTGAGCAGTGTCTTTGTCTAATAGCCCTTGGCTTCTGGTACAATGATCTCCGTGGCGCTGATAACGGCTTC GTCATCCGTCAAGTCATCAACGCCGCGGGCTTTAACCGCTTTGCCACTGGTGCTCTGGCCGTTCTTCTTGGCGAC AAGCAGCAGTTGATACAAACACGGTCCTTTGTAATTTGGCAGCTCATTCTGGCCGGCATTGTCTCCACCACAGTC CAGACCCAGGACATGTACGACCAAGAGGGGGATGCTAAGCGAGGCCGTCACACCGTTCCCTTGGATCTTGGGGAT GGGTTGGCTCGCTGGACCATTGCCGTGCCCATGGTCCTTTGGTGCACCTTTTGTCCCTTGTTCATCGCCTGCCCT TTGATTGGCTTCGCCATTTCCATTTCAATGGGCTCCATCATCGCGCTTCGATGCCTCGTATTTAGGAGCGTGGCG TCTGACAAAGTTACATTCATCATGTGGAATTCGTGGCTGGTTTCCATATACTCACTGCCACTCTTGACGGTAGCT TTGAACCGAGCGTCATGA |