© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|2063 |
| Gene name | |
| Location | Contig_169:21738..22837 |
| Strand | - |
| Gene length (bp) | 1099 |
| Transcript length (bp) | 909 |
| Coding sequence length (bp) | 909 |
| Protein length (aa) | 303 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8IXT5|RB12B_HUMAN | RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 | 210 | 299 | 2.0E-06 |
| sp|Q8IXT5|RB12B_HUMAN | RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 | 210 | 299 | 2.0E-06 |
| sp|Q5UPJ3|YL116_MIMIV | Uncharacterized protein L116 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L116 PE=3 SV=1 | 195 | 293 | 3.0E-06 |
| sp|Q8IXT5|RB12B_HUMAN | RNA-binding protein 12B OS=Homo sapiens GN=RBM12B PE=1 SV=2 | 206 | 299 | 6.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|2063 MRSQAVAVASALAGTASLVQATNYNPPCPSVTVTGEVCPTCPVKECLDIETITANKQCPYPIPTTTTSYPCYQPH NKCPTGCASTSYVTVGPTPGYPNPSYTKPSYTKPSYTKPSYTKPDNTPSPMPTLPTHVNPENPCPTLTHTRSVCS TCIRPLCITIETLSCAKGCPTPVPTVYTEIGCHQKCPGGCATQYELASNCGSRSTHNAYPPPASSNYPPPASSNY PPPASSNYPPPASSNYPPPASSNYPPPASSNYPPPASSNYPPPASSNYPPPASSNYPPPASSNYPPPAYNPYPPP RF* |
| Coding | >OphauG2|2063 ATGCGTTCTCAGGCAGTGGCTGTTGCCTCGGCACTCGCTGGCACCGCCAGCCTCGTCCAAGCAACCAACTACAAC CCTCCCTGTCCATCCGTCACCGTCACCGGAGAGGTCTGCCCAACTTGCCCCGTCAAGGAATGCCTCGACATTGAA ACCATTACCGCCAACAAGCAATGCCCCTATCCGATTCCCACCACCACCACCTCGTATCCATGCTACCAGCCGCAC AACAAGTGCCCTACTGGCTGCGCTTCGACCTCTTATGTCACTGTTGGTCCAACACCGGGCTATCCCAACCCGAGC TATACCAAGCCCAGTTATACCAAGCCCAGCTATACCAAGCCAAGCTATACCAAGCCCGACAATACGCCCTCGCCC ATGCCCACGCTGCCCACCCATGTCAACCCAGAGAATCCGTGCCCGACACTCACTCACACTCGCAGCGTCTGCTCG ACCTGTATTCGCCCGTTGTGTATTACCATTGAGACCCTGAGCTGTGCCAAGGGATGCCCGACCCCGGTGCCTACG GTTTATACAGAGATTGGCTGCCACCAAAAGTGCCCTGGTGGATGTGCTACGCAGTATGAGCTTGCTAGCAACTGT GGCTCAAGATCGACCCACAATGCCTACCCTCCTCCAGCTTCTTCCAATTATCCTCCCCCCGCTTCCTCCAACTAC CCTCCTCCCGCTTCCTCCAACTATCCTCCTCCAGCTTCCTCCAACTACCCTCCTCCAGCTTCTTCTAATTATCCC CCTCCAGCTTCCTCCAACTACCCTCCTCCAGCTTCCTCCAACTACCCTCCTCCCGCTTCCTCCAACTACCCTCCT CCCGCTTCTTCTAATTATCCTCCTCCAGCTTCCTCCAACTATCCTCCCCCAGCTTACAACCCATACCCTCCCCCG AGATTCTAA |
| Transcript | >OphauG2|2063 ATGCGTTCTCAGGCAGTGGCTGTTGCCTCGGCACTCGCTGGCACCGCCAGCCTCGTCCAAGCAACCAACTACAAC CCTCCCTGTCCATCCGTCACCGTCACCGGAGAGGTCTGCCCAACTTGCCCCGTCAAGGAATGCCTCGACATTGAA ACCATTACCGCCAACAAGCAATGCCCCTATCCGATTCCCACCACCACCACCTCGTATCCATGCTACCAGCCGCAC AACAAGTGCCCTACTGGCTGCGCTTCGACCTCTTATGTCACTGTTGGTCCAACACCGGGCTATCCCAACCCGAGC TATACCAAGCCCAGTTATACCAAGCCCAGCTATACCAAGCCAAGCTATACCAAGCCCGACAATACGCCCTCGCCC ATGCCCACGCTGCCCACCCATGTCAACCCAGAGAATCCGTGCCCGACACTCACTCACACTCGCAGCGTCTGCTCG ACCTGTATTCGCCCGTTGTGTATTACCATTGAGACCCTGAGCTGTGCCAAGGGATGCCCGACCCCGGTGCCTACG GTTTATACAGAGATTGGCTGCCACCAAAAGTGCCCTGGTGGATGTGCTACGCAGTATGAGCTTGCTAGCAACTGT GGCTCAAGATCGACCCACAATGCCTACCCTCCTCCAGCTTCTTCCAATTATCCTCCCCCCGCTTCCTCCAACTAC CCTCCTCCCGCTTCCTCCAACTATCCTCCTCCAGCTTCCTCCAACTACCCTCCTCCAGCTTCTTCTAATTATCCC CCTCCAGCTTCCTCCAACTACCCTCCTCCAGCTTCCTCCAACTACCCTCCTCCCGCTTCCTCCAACTACCCTCCT CCCGCTTCTTCTAATTATCCTCCTCCAGCTTCCTCCAACTATCCTCCCCCAGCTTACAACCCATACCCTCCCCCG AGATTCTAA |
| Gene | >OphauG2|2063 ATGCGTTCTCAGGCAGTGGCTGTTGCCTCGGCACTCGCTGGGTAAGGCTCATTCACTCTTCTCTGCTTTCCCTTG GTTACAGGCTCGTAATTACTAGAGAGGCTACAATCTCCTTTTTTTTTGCCCTCTTCGACTTGATTTTGTCTCGAT AATCTTCATCTTTTTTACTCCCCCCCCCCTTGCTTTCGTAAACTTGATTCTTACCTCCTTTTACTAACACTTAAA AAAAAGCACCGCCAGCCTCGTCCAAGCAACCAACTACAACCCTCCCTGTCCATCCGTCACCGTCACCGGAGAGGT CTGCCCAACTTGCCCCGTCAAGGAATGCCTCGACATTGAAACCATTACCGCCAACAAGCAATGCCCCTATCCGAT TCCCACCACCACCACCTCGTATCCATGCTACCAGCCGCACAACAAGTGCCCTACTGGCTGCGCTTCGACCTCTTA TGTCACTGTTGGTCCAACACCGGGCTATCCCAACCCGAGCTATACCAAGCCCAGTTATACCAAGCCCAGCTATAC CAAGCCAAGCTATACCAAGCCCGACAATACGCCCTCGCCCATGCCCACGCTGCCCACCCATGTCAACCCAGAGAA TCCGTGCCCGACACTCACTCACACTCGCAGCGTCTGCTCGACCTGTATTCGCCCGTTGTGTATTACCATTGAGAC CCTGAGCTGTGCCAAGGGATGCCCGACCCCGGTGCCTACGGTTTATACAGAGATTGGCTGCCACCAAAAGTGCCC TGGTGGATGTGCTACGCAGTATGAGCTTGCTAGCAACTGTGGCTCAAGATCGACCCACAATGCCTACCCTCCTCC AGCTTCTTCCAATTATCCTCCCCCCGCTTCCTCCAACTACCCTCCTCCCGCTTCCTCCAACTATCCTCCTCCAGC TTCCTCCAACTACCCTCCTCCAGCTTCTTCTAATTATCCCCCTCCAGCTTCCTCCAACTACCCTCCTCCAGCTTC CTCCAACTACCCTCCTCCCGCTTCCTCCAACTACCCTCCTCCCGCTTCTTCTAATTATCCTCCTCCAGCTTCCTC CAACTATCCTCCCCCAGCTTACAACCCATACCCTCCCCCGAGATTCTAA |