Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1995
Gene name
LocationContig_166:10846..12528
Strand+
Gene length (bp)1682
Transcript length (bp)1605
Coding sequence length (bp)1605
Protein length (aa) 535

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12756 zf-C2H2_2 C2H2 type zinc-finger (2 copies) 2.0E-27 202 298
PF12874 zf-met Zinc-finger of C2H2 type 2.0E-06 85 108
PF12171 zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 3.6E-06 86 109

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|G0S920|REI1_CHATD Cytoplasmic 60S subunit biogenesis factor REI1 homolog OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=CTHT_0044240 PE=3 SV=2 6 503 9.0E-164
sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1 16 301 2.0E-53
sp|Q06709|REH1_YEAST Cytoplasmic 60S subunit biogenesis factor REH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REH1 PE=1 SV=1 198 497 9.0E-24
sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1 19 179 2.0E-21
sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1 19 108 4.0E-19
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|G0S920|REI1_CHATD Cytoplasmic 60S subunit biogenesis factor REI1 homolog OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=CTHT_0044240 PE=3 SV=2 6 503 9.0E-164
sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1 16 301 2.0E-53
sp|Q06709|REH1_YEAST Cytoplasmic 60S subunit biogenesis factor REH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REH1 PE=1 SV=1 198 497 9.0E-24
sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1 19 179 2.0E-21
sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1 19 108 4.0E-19
sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=1 SV=1 21 179 9.0E-19
sp|P38344|REI1_YEAST Cytoplasmic 60S subunit biogenesis factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REI1 PE=1 SV=3 202 319 3.0E-18
sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=1 SV=2 19 179 8.0E-18
sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=1 SV=1 199 301 1.0E-17
sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=1 SV=2 202 301 1.0E-17
sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1 199 301 2.0E-17
sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1 199 301 9.0E-17
sp|Q06709|REH1_YEAST Cytoplasmic 60S subunit biogenesis factor REH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REH1 PE=1 SV=1 15 66 1.0E-12
sp|P38344|REI1_YEAST Cytoplasmic 60S subunit biogenesis factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REI1 PE=1 SV=3 14 62 7.0E-12
sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1 3 135 1.0E-07
sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1 413 440 2.0E-07
sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1 7 135 7.0E-07
sp|O74977|VMS1_SCHPO VMS1 homolog C1827.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.04 PE=1 SV=1 21 62 7.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1995
MTSVDAGSGPSGTAASLPYKCNTCQVAYRNSDLQKTHMKSDWHRYNLKRRVTSLPPISSEIFTEKVLQARAVTTA
EANKAYFERTCDSCNKTYNSENAFSNHLLSHKHKQNLVAMAQLRPDDDTTSVVSSTFSLGEPTIVAKDALDSDAE
NEFNQVVESLQKTSVTQQRPSPVKRPSNPHFSQADAELSKTYLQPNWSTTCCIFCNYTSPSTTLNVDHMERFHGM
FIPERPYLVNLEGLIAQLQQQVSEHHECLGCGKVKSTVFAVQTHMRDKGHCLIPYTTEAEQLRIGDFYDFRSTYT
DDDYDDHDESNSSETSEADNGGAKLGSKRCATSTDSHGQLVDESGDADGWETDTSVSSLDSADLTAVPAEGHIHQ
FERLSRHPHHSHNDPRNRHQVDGWHSRAHKHTHAVFYDEYELHLPSGKSVGHRSLNRYFRQNLHNYPSPDERAHR
LALEPPPPHDTDLDPCAVALLTGQVLPRGLLGMAGVSHEKRRQVRKAEHRARDVARDRTRKNDLAYGKAANSQKT
YYYRYDGGG*
Coding >OphauG2|1995
ATGACGAGCGTCGATGCCGGCTCCGGCCCCTCCGGCACGGCCGCCTCGCTGCCTTACAAGTGCAACACTTGCCAG
GTGGCCTACCGCAATAGCGACTTGCAAAAGACTCACATGAAGAGCGACTGGCATCGATACAACTTGAAGCGTCGT
GTCACATCTCTGCCGCCAATCTCATCAGAAATCTTTACTGAAAAGGTGCTTCAGGCCCGCGCCGTCACCACGGCA
GAGGCCAACAAGGCCTACTTTGAGCGCACCTGTGACTCGTGCAATAAGACGTACAACAGCGAAAATGCCTTTTCG
AATCATTTGCTCAGCCACAAACACAAGCAAAACCTCGTTGCCATGGCTCAATTGCGTCCCGACGACGACACCACG
TCGGTTGTCAGCTCCACCTTCTCTCTTGGCGAGCCCACCATTGTTGCCAAAGATGCTCTCGACTCGGACGCAGAA
AACGAGTTTAACCAGGTTGTTGAGAGCTTACAAAAAACTTCGGTGACGCAGCAGCGCCCATCGCCCGTCAAACGG
CCCTCAAACCCTCATTTTAGCCAGGCTGATGCCGAGCTGAGCAAGACGTATTTGCAGCCAAACTGGTCTACCACT
TGCTGCATATTCTGCAACTACACCTCGCCCTCCACCACTCTCAATGTCGATCACATGGAGCGTTTCCATGGCATG
TTCATTCCCGAGCGTCCCTATCTTGTCAATCTTGAGGGCCTCATCGCCCAGCTACAGCAGCAGGTTAGCGAGCAT
CACGAGTGTCTCGGCTGCGGCAAGGTCAAATCAACAGTCTTTGCCGTTCAAACTCATATGCGTGACAAGGGTCAC
TGCCTGATTCCTTACACTACCGAAGCGGAGCAGTTGAGGATTGGTGATTTTTACGACTTTCGTAGCACTTATACC
GACGACGACTATGACGACCATGACGAATCCAACAGCAGCGAAACATCGGAAGCAGACAATGGCGGTGCCAAGCTT
GGCTCCAAGCGATGCGCCACTAGTACCGATTCTCATGGACAGCTGGTGGATGAGTCGGGAGACGCCGATGGCTGG
GAGACGGACACGTCGGTTTCCTCTCTCGACTCGGCCGACCTAACAGCCGTGCCTGCTGAAGGCCACATTCACCAG
TTTGAACGGCTTAGCCGACACCCTCACCACTCGCACAACGACCCGCGTAACCGCCACCAGGTCGACGGCTGGCAC
TCGCGCGCCCACAAGCACACCCACGCCGTCTTTTACGACGAATATGAGCTCCACCTCCCTTCGGGCAAGTCTGTC
GGCCACCGCTCCCTCAACCGCTACTTTCGCCAAAACCTGCACAACTACCCCTCGCCCGACGAGCGCGCCCACCGC
CTCGCCCTTGAGCCTCCCCCGCCCCATGACACTGACCTTGACCCTTGCGCTGTAGCCCTGCTCACTGGCCAAGTC
TTGCCCCGTGGCTTGCTGGGCATGGCGGGCGTCTCGCACGAAAAGAGGCGCCAGGTGCGCAAGGCAGAGCACCGC
GCCCGAGATGTCGCCCGCGACCGCACCAGGAAAAACGACTTGGCCTACGGCAAGGCTGCAAATAGCCAAAAGACG
TACTACTACCGCTACGACGGTGGTGGTTAG
Transcript >OphauG2|1995
ATGACGAGCGTCGATGCCGGCTCCGGCCCCTCCGGCACGGCCGCCTCGCTGCCTTACAAGTGCAACACTTGCCAG
GTGGCCTACCGCAATAGCGACTTGCAAAAGACTCACATGAAGAGCGACTGGCATCGATACAACTTGAAGCGTCGT
GTCACATCTCTGCCGCCAATCTCATCAGAAATCTTTACTGAAAAGGTGCTTCAGGCCCGCGCCGTCACCACGGCA
GAGGCCAACAAGGCCTACTTTGAGCGCACCTGTGACTCGTGCAATAAGACGTACAACAGCGAAAATGCCTTTTCG
AATCATTTGCTCAGCCACAAACACAAGCAAAACCTCGTTGCCATGGCTCAATTGCGTCCCGACGACGACACCACG
TCGGTTGTCAGCTCCACCTTCTCTCTTGGCGAGCCCACCATTGTTGCCAAAGATGCTCTCGACTCGGACGCAGAA
AACGAGTTTAACCAGGTTGTTGAGAGCTTACAAAAAACTTCGGTGACGCAGCAGCGCCCATCGCCCGTCAAACGG
CCCTCAAACCCTCATTTTAGCCAGGCTGATGCCGAGCTGAGCAAGACGTATTTGCAGCCAAACTGGTCTACCACT
TGCTGCATATTCTGCAACTACACCTCGCCCTCCACCACTCTCAATGTCGATCACATGGAGCGTTTCCATGGCATG
TTCATTCCCGAGCGTCCCTATCTTGTCAATCTTGAGGGCCTCATCGCCCAGCTACAGCAGCAGGTTAGCGAGCAT
CACGAGTGTCTCGGCTGCGGCAAGGTCAAATCAACAGTCTTTGCCGTTCAAACTCATATGCGTGACAAGGGTCAC
TGCCTGATTCCTTACACTACCGAAGCGGAGCAGTTGAGGATTGGTGATTTTTACGACTTTCGTAGCACTTATACC
GACGACGACTATGACGACCATGACGAATCCAACAGCAGCGAAACATCGGAAGCAGACAATGGCGGTGCCAAGCTT
GGCTCCAAGCGATGCGCCACTAGTACCGATTCTCATGGACAGCTGGTGGATGAGTCGGGAGACGCCGATGGCTGG
GAGACGGACACGTCGGTTTCCTCTCTCGACTCGGCCGACCTAACAGCCGTGCCTGCTGAAGGCCACATTCACCAG
TTTGAACGGCTTAGCCGACACCCTCACCACTCGCACAACGACCCGCGTAACCGCCACCAGGTCGACGGCTGGCAC
TCGCGCGCCCACAAGCACACCCACGCCGTCTTTTACGACGAATATGAGCTCCACCTCCCTTCGGGCAAGTCTGTC
GGCCACCGCTCCCTCAACCGCTACTTTCGCCAAAACCTGCACAACTACCCCTCGCCCGACGAGCGCGCCCACCGC
CTCGCCCTTGAGCCTCCCCCGCCCCATGACACTGACCTTGACCCTTGCGCTGTAGCCCTGCTCACTGGCCAAGTC
TTGCCCCGTGGCTTGCTGGGCATGGCGGGCGTCTCGCACGAAAAGAGGCGCCAGGTGCGCAAGGCAGAGCACCGC
GCCCGAGATGTCGCCCGCGACCGCACCAGGAAAAACGACTTGGCCTACGGCAAGGCTGCAAATAGCCAAAAGACG
TACTACTACCGCTACGACGGTGGTGGTTAG
Gene >OphauG2|1995
ATGACGAGCGTCGATGCCGGCTCCGGCCCCTCCGGCACGGCCGCCTCGCTGCCTTACAAGTGCAACACTTGCCAG
GTGGCCTACCGCAATAGCGACTTGCAAAAGACTCACATGAAGAGCGACTGGCAGTAAGCTCCCCTTCCCCTCTCC
CCCCTGCCCCCCACAACTCGCCTCTGCCACTTTACTCCAAGCTGACGGGCTGAAGTCGATACAACTTGAAGCGTC
GTGTCACATCTCTGCCGCCAATCTCATCAGAAATCTTTACTGAAAAGGTGCTTCAGGCCCGCGCCGTCACCACGG
CAGAGGCCAACAAGGCCTACTTTGAGCGCACCTGTGACTCGTGCAATAAGACGTACAACAGCGAAAATGCCTTTT
CGAATCATTTGCTCAGCCACAAACACAAGCAAAACCTCGTTGCCATGGCTCAATTGCGTCCCGACGACGACACCA
CGTCGGTTGTCAGCTCCACCTTCTCTCTTGGCGAGCCCACCATTGTTGCCAAAGATGCTCTCGACTCGGACGCAG
AAAACGAGTTTAACCAGGTTGTTGAGAGCTTACAAAAAACTTCGGTGACGCAGCAGCGCCCATCGCCCGTCAAAC
GGCCCTCAAACCCTCATTTTAGCCAGGCTGATGCCGAGCTGAGCAAGACGTATTTGCAGCCAAACTGGTCTACCA
CTTGCTGCATATTCTGCAACTACACCTCGCCCTCCACCACTCTCAATGTCGATCACATGGAGCGTTTCCATGGCA
TGTTCATTCCCGAGCGTCCCTATCTTGTCAATCTTGAGGGCCTCATCGCCCAGCTACAGCAGCAGGTTAGCGAGC
ATCACGAGTGTCTCGGCTGCGGCAAGGTCAAATCAACAGTCTTTGCCGTTCAAACTCATATGCGTGACAAGGGTC
ACTGCCTGATTCCTTACACTACCGAAGCGGAGCAGTTGAGGATTGGTGATTTTTACGACTTTCGTAGCACTTATA
CCGACGACGACTATGACGACCATGACGAATCCAACAGCAGCGAAACATCGGAAGCAGACAATGGCGGTGCCAAGC
TTGGCTCCAAGCGATGCGCCACTAGTACCGATTCTCATGGACAGCTGGTGGATGAGTCGGGAGACGCCGATGGCT
GGGAGACGGACACGTCGGTTTCCTCTCTCGACTCGGCCGACCTAACAGCCGTGCCTGCTGAAGGCCACATTCACC
AGTTTGAACGGCTTAGCCGACACCCTCACCACTCGCACAACGACCCGCGTAACCGCCACCAGGTCGACGGCTGGC
ACTCGCGCGCCCACAAGCACACCCACGCCGTCTTTTACGACGAATATGAGCTCCACCTCCCTTCGGGCAAGTCTG
TCGGCCACCGCTCCCTCAACCGCTACTTTCGCCAAAACCTGCACAACTACCCCTCGCCCGACGAGCGCGCCCACC
GCCTCGCCCTTGAGCCTCCCCCGCCCCATGACACTGACCTTGACCCTTGCGCTGTAGCCCTGCTCACTGGCCAAG
TCTTGCCCCGTGGCTTGCTGGGCATGGCGGGCGTCTCGCACGAAAAGAGGCGCCAGGTGCGCAAGGCAGAGCACC
GCGCCCGAGATGTCGCCCGCGACCGCACCAGGAAAAACGACTTGGCCTACGGCAAGGCTGCAAATAGCCAAAAGA
CGTACTACTACCGCTACGACGGTGGTGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail