© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1972 |
| Gene name | |
| Location | Contig_1648:690..1833 |
| Strand | + |
| Gene length (bp) | 1143 |
| Transcript length (bp) | 1044 |
| Coding sequence length (bp) | 1044 |
| Protein length (aa) | 348 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00722 | Glyco_hydro_16 | Glycosyl hydrolases family 16 | 3.8E-11 | 108 | 245 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q53317|XYND_RUMFL | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2 | 119 | 244 | 2.0E-06 |
| sp|P37073|GUB_BREBE | Beta-glucanase OS=Brevibacillus brevis GN=bglBB PE=1 SV=1 | 46 | 244 | 4.0E-06 |
| sp|P45797|GUB_PAEPO | Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1 | 79 | 245 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016787 | hydrolase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1972 MQIQVVLVVLVASTGVAAAAQCECGFLIEGEEGQGGPWIFNEAVESAFGRIKDIGDDERWVRQEFDVSAVAGRGK YGKAFRVDKVQIGSGGVELGVGSELVQDDAVPVGELDSARADLHWGSYRAGIKLTAVPGTCSAFFWYFNDTQEID MEFLSHEYSAQTRQWPVNLVVQSRKSQEAGYDAQKTGLFRRIMLGFDPTTAFHEYRFDYLADRVVFYADGNKLAE MVAGGDMPTSSGHLVLQHWSNGNPLWSGGPPREDALMTVSYVKAYFNSTTSKAGRQACASDAVCRVEDVTAANAS TGGAFLTDDGRRGGSRSGHEDESGATRQDVVATVLLLTCMGVVLVSM* |
| Coding | >OphauG2|1972 ATGCAGATACAAGTGGTGCTGGTGGTCCTTGTGGCCAGCACAGGGGTAGCAGCAGCAGCACAGTGTGAGTGCGGA TTTCTGATAGAGGGTGAGGAGGGCCAAGGCGGGCCGTGGATCTTCAACGAGGCAGTTGAGAGCGCGTTTGGGCGA ATCAAAGACATCGGGGATGACGAGAGATGGGTGCGGCAAGAGTTCGACGTGTCGGCGGTAGCAGGACGAGGCAAA TATGGAAAGGCATTTAGGGTGGACAAAGTGCAGATTGGGTCAGGGGGAGTCGAGTTGGGCGTGGGCAGCGAGCTG GTGCAAGACGATGCAGTGCCAGTGGGCGAACTCGACTCTGCGCGCGCCGACTTGCACTGGGGCTCGTACCGGGCG GGAATCAAGTTGACGGCGGTGCCAGGGACATGCAGCGCCTTTTTCTGGTACTTCAACGACACGCAGGAAATCGAC ATGGAGTTTCTGTCACACGAGTATTCGGCGCAGACGCGGCAGTGGCCCGTCAACCTGGTGGTGCAGAGCCGCAAG TCGCAAGAGGCAGGCTACGATGCACAAAAGACGGGGCTCTTTCGGCGCATCATGCTCGGGTTTGACCCAACGACG GCTTTTCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTTTACGCCGACGGCAACAAGCTGGCCGAG ATGGTGGCGGGAGGCGACATGCCGACAAGCTCGGGGCACTTGGTGCTTCAGCATTGGAGCAATGGAAACCCGTTG TGGTCGGGGGGGCCGCCACGCGAGGATGCCCTCATGACTGTGAGCTATGTCAAGGCCTACTTTAACTCGACCACG AGCAAGGCTGGGCGCCAAGCGTGCGCTTCCGACGCCGTGTGCAGAGTCGAGGATGTGACGGCAGCCAATGCTAGC ACTGGCGGAGCCTTTTTGACAGATGATGGTCGACGAGGAGGGTCACGCAGCGGCCATGAAGACGAGAGTGGCGCT ACGAGGCAAGACGTGGTGGCCACGGTGTTGCTTCTGACTTGTATGGGGGTGGTGCTAGTCTCGATGTGA |
| Transcript | >OphauG2|1972 ATGCAGATACAAGTGGTGCTGGTGGTCCTTGTGGCCAGCACAGGGGTAGCAGCAGCAGCACAGTGTGAGTGCGGA TTTCTGATAGAGGGTGAGGAGGGCCAAGGCGGGCCGTGGATCTTCAACGAGGCAGTTGAGAGCGCGTTTGGGCGA ATCAAAGACATCGGGGATGACGAGAGATGGGTGCGGCAAGAGTTCGACGTGTCGGCGGTAGCAGGACGAGGCAAA TATGGAAAGGCATTTAGGGTGGACAAAGTGCAGATTGGGTCAGGGGGAGTCGAGTTGGGCGTGGGCAGCGAGCTG GTGCAAGACGATGCAGTGCCAGTGGGCGAACTCGACTCTGCGCGCGCCGACTTGCACTGGGGCTCGTACCGGGCG GGAATCAAGTTGACGGCGGTGCCAGGGACATGCAGCGCCTTTTTCTGGTACTTCAACGACACGCAGGAAATCGAC ATGGAGTTTCTGTCACACGAGTATTCGGCGCAGACGCGGCAGTGGCCCGTCAACCTGGTGGTGCAGAGCCGCAAG TCGCAAGAGGCAGGCTACGATGCACAAAAGACGGGGCTCTTTCGGCGCATCATGCTCGGGTTTGACCCAACGACG GCTTTTCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTTTACGCCGACGGCAACAAGCTGGCCGAG ATGGTGGCGGGAGGCGACATGCCGACAAGCTCGGGGCACTTGGTGCTTCAGCATTGGAGCAATGGAAACCCGTTG TGGTCGGGGGGGCCGCCACGCGAGGATGCCCTCATGACTGTGAGCTATGTCAAGGCCTACTTTAACTCGACCACG AGCAAGGCTGGGCGCCAAGCGTGCGCTTCCGACGCCGTGTGCAGAGTCGAGGATGTGACGGCAGCCAATGCTAGC ACTGGCGGAGCCTTTTTGACAGATGATGGTCGACGAGGAGGGTCACGCAGCGGCCATGAAGACGAGAGTGGCGCT ACGAGGCAAGACGTGGTGGCCACGGTGTTGCTTCTGACTTGTATGGGGGTGGTGCTAGTCTCGATGTGA |
| Gene | >OphauG2|1972 ATGCAGATACAAGTGGTGCTGGTGGTCCTTGTGGCCAGCACAGGGGTAGCAGCAGCAGCACAGTGTGAGTGCGGA TTTCTGATAGAGGGTGAGGAGGGCCAAGGCGGGCCGTGGATCTTCAACGAGGCAGTTGAGAGCGCGTTTGGGCGA ATCAAAGACATCGGGGATGACGAGAGATGGGTGCGGCAAGAGTTCGACGTGTCGGCGGTAGCAGGACGAGGCAAA TATGGAAAGGCATTTAGGGTGGACAAAGTGCAGATTGGGTCAGGGGGAGTCGAGTTGGGCGTGGGCAGCGAGCTG GTGCAAGACGATGCAGTGCCAGTGGGCGAACTCGACTCTGCGCGCGCCGACTTGCACTGGGGCTCGTACCGGGCG GGAATCAAGTTGACGGCGGTGCCAGGGACATGCAGCGCCTTTTTCTGGGTATGTTTTTTTGCTATTCTTGCCTGG AATTGCATCGACATGTTTTTGCAAAGGCTTGCTGCAGGAACAGGACAGCCGCTGACGCGGGGGGGGCGGCAGTAC TTCAACGACACGCAGGAAATCGACATGGAGTTTCTGTCACACGAGTATTCGGCGCAGACGCGGCAGTGGCCCGTC AACCTGGTGGTGCAGAGCCGCAAGTCGCAAGAGGCAGGCTACGATGCACAAAAGACGGGGCTCTTTCGGCGCATC ATGCTCGGGTTTGACCCAACGACGGCTTTTCACGAGTACCGCTTCGACTACCTGGCGGACCGCGTCGTCTTTTAC GCCGACGGCAACAAGCTGGCCGAGATGGTGGCGGGAGGCGACATGCCGACAAGCTCGGGGCACTTGGTGCTTCAG CATTGGAGCAATGGAAACCCGTTGTGGTCGGGGGGGCCGCCACGCGAGGATGCCCTCATGACTGTGAGCTATGTC AAGGCCTACTTTAACTCGACCACGAGCAAGGCTGGGCGCCAAGCGTGCGCTTCCGACGCCGTGTGCAGAGTCGAG GATGTGACGGCAGCCAATGCTAGCACTGGCGGAGCCTTTTTGACAGATGATGGTCGACGAGGAGGGTCACGCAGC GGCCATGAAGACGAGAGTGGCGCTACGAGGCAAGACGTGGTGGCCACGGTGTTGCTTCTGACTTGTATGGGGGTG GTGCTAGTCTCGATGTGA |