Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|1942
Gene name
Location	Contig_1630:525..2258
Strand	+
Gene length (bp)	1733
Transcript length (bp)	1608
Coding sequence length (bp)	1608
Protein length (aa)	536

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03208	PRA1	PRA1 family protein	3.3E-25	33	135

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53633\|PRA1_YEAST	Prenylated Rab acceptor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP3 PE=1 SV=2	16	135	5.0E-23
sp\|Q9UUN5\|PRA1_SCHPO	PRA1-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC306.02c PE=2 SV=1	33	135	1.0E-15
sp\|Q8HY39\|PRAF1_CANLF	Prenylated Rab acceptor protein 1 OS=Canis lupus familiaris GN=RABAC1 PE=2 SV=1	34	104	2.0E-06
sp\|Q9UI14\|PRAF1_HUMAN	Prenylated Rab acceptor protein 1 OS=Homo sapiens GN=RABAC1 PE=1 SV=1	34	104	3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	70	92	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|1942 MSRIQVPLDVLTSRLNIGQRFQGLRSGPLTGRFSNLRPISEFFDFKRLSKPANFGDMQSRVNYNLAHFSSNYAVV FAMLSIYALLTNWLLLFDIVLVLAGVFLIGRLEGRDLEIGSFRASSSQLYTGLIVVAVPLDGRPRAPKFAPQWGR PSRRSRPRTDGDAALRDPWLHEARVRIQELDTDPGDDSDASGSESRFVSDSLLFTGIDLGDRNKGVARRRHLLDS QDDEDPRGSSTSSDDAFPQEAGERQVALVQSALHRIARAQAKGKADVRLSKQELEALERRRLRMQQEENRGRGEH GTKKQNKKKRASKEQRIAVPLSQLEPSSRKKRGMQTQAKEPQQDDLARHSSGAQARQGSAPRVYPPMGYFAPPSS SRSRQRWSASHEPRASPLDYEYTAHPSASSRHVSDSAARLQQRQALSRQAPPSRASFDPLGNQTGARASRRYTSD PAEVAYTRDRGGAAHGVRDTSETSSATSVESPGNESDGHQRPPAATRAEAVSVAPGWDKTGKKKSPPSVPGKRRD EASGSGRRKR*
Coding	>OphauG2\|1942 ATGTCTCGCATCCAGGTTCCCCTCGACGTCCTGACGTCGCGCCTCAACATTGGCCAACGCTTCCAGGGCTTACGC TCTGGCCCCCTGACGGGCCGCTTCTCCAACCTGCGCCCCATCTCCGAGTTCTTTGATTTCAAACGCCTCTCCAAG CCTGCAAACTTTGGTGACATGCAATCGCGTGTCAACTACAACCTTGCCCACTTTTCAAGCAACTATGCCGTCGTC TTTGCCATGCTGAGCATCTACGCTTTATTGACCAACTGGCTGCTGCTCTTTGATATTGTCCTGGTCCTGGCCGGC GTCTTCCTCATTGGCCGTCTCGAGGGCCGCGACCTTGAAATCGGCTCCTTTCGTGCCTCTTCCTCCCAGCTTTAC ACTGGCCTCATTGTTGTTGCCGTGCCTCTGGATGGTCGGCCGCGAGCTCCCAAATTTGCGCCCCAATGGGGAAGA CCATCGAGGCGCAGCCGGCCGCGGACGGATGGCGACGCTGCGCTTCGCGACCCGTGGCTCCATGAGGCACGGGTC AGGATTCAGGAACTGGACACGGACCCTGGCGACGATAGCGACGCAAGTGGTTCCGAGTCGCGCTTTGTCAGCGAT TCTCTTTTATTTACAGGCATAGATTTGGGCGACAGGAACAAGGGTGTGGCGCGCCGCAGACATTTGCTAGATTCC CAGGATGACGAGGACCCGCGTGGCTCCAGCACGTCGAGCGACGATGCATTCCCACAGGAAGCTGGAGAGAGACAA GTGGCATTGGTACAATCTGCACTGCATCGCATTGCTCGAGCGCAGGCCAAAGGCAAAGCCGACGTGAGGCTTAGC AAGCAGGAACTCGAGGCATTGGAACGGCGAAGACTGCGCATGCAGCAAGAGGAAAACAGAGGACGTGGAGAGCAT GGGACAAAGAAGCAGAACAAGAAGAAAAGGGCATCCAAGGAGCAGCGCATAGCCGTGCCTCTATCTCAGCTGGAG CCCTCGTCGCGCAAGAAGAGGGGCATGCAAACCCAGGCCAAGGAGCCGCAGCAAGATGACTTGGCGCGGCACAGC TCAGGGGCGCAGGCGCGTCAAGGCAGCGCGCCTCGTGTCTATCCCCCAATGGGCTATTTTGCTCCTCCTAGCTCG TCCCGCTCGCGTCAAAGATGGAGCGCCAGCCACGAGCCGAGGGCATCCCCGTTGGACTATGAATACACGGCGCAT CCCAGTGCCAGCAGCCGCCACGTGTCCGACTCGGCAGCGCGACTGCAGCAAAGGCAAGCATTGTCGCGTCAAGCG CCGCCAAGCCGAGCTTCCTTTGATCCCCTTGGCAACCAGACGGGCGCGCGTGCCTCGAGGCGATACACATCGGAC CCAGCAGAGGTAGCCTATACACGGGACCGTGGAGGCGCAGCCCACGGTGTGCGCGACACGAGCGAGACGTCGAGT GCGACGAGTGTAGAGAGTCCTGGCAATGAAAGCGACGGACATCAAAGGCCACCTGCAGCGACACGGGCGGAAGCG GTGTCTGTGGCGCCAGGGTGGGACAAGACTGGCAAGAAGAAGTCGCCGCCGTCGGTGCCAGGAAAGAGGAGAGAC GAGGCTTCGGGAAGTGGGCGGAGGAAAAGGTAG
Transcript	>OphauG2\|1942 ATGTCTCGCATCCAGGTTCCCCTCGACGTCCTGACGTCGCGCCTCAACATTGGCCAACGCTTCCAGGGCTTACGC TCTGGCCCCCTGACGGGCCGCTTCTCCAACCTGCGCCCCATCTCCGAGTTCTTTGATTTCAAACGCCTCTCCAAG CCTGCAAACTTTGGTGACATGCAATCGCGTGTCAACTACAACCTTGCCCACTTTTCAAGCAACTATGCCGTCGTC TTTGCCATGCTGAGCATCTACGCTTTATTGACCAACTGGCTGCTGCTCTTTGATATTGTCCTGGTCCTGGCCGGC GTCTTCCTCATTGGCCGTCTCGAGGGCCGCGACCTTGAAATCGGCTCCTTTCGTGCCTCTTCCTCCCAGCTTTAC ACTGGCCTCATTGTTGTTGCCGTGCCTCTGGATGGTCGGCCGCGAGCTCCCAAATTTGCGCCCCAATGGGGAAGA CCATCGAGGCGCAGCCGGCCGCGGACGGATGGCGACGCTGCGCTTCGCGACCCGTGGCTCCATGAGGCACGGGTC AGGATTCAGGAACTGGACACGGACCCTGGCGACGATAGCGACGCAAGTGGTTCCGAGTCGCGCTTTGTCAGCGAT TCTCTTTTATTTACAGGCATAGATTTGGGCGACAGGAACAAGGGTGTGGCGCGCCGCAGACATTTGCTAGATTCC CAGGATGACGAGGACCCGCGTGGCTCCAGCACGTCGAGCGACGATGCATTCCCACAGGAAGCTGGAGAGAGACAA GTGGCATTGGTACAATCTGCACTGCATCGCATTGCTCGAGCGCAGGCCAAAGGCAAAGCCGACGTGAGGCTTAGC AAGCAGGAACTCGAGGCATTGGAACGGCGAAGACTGCGCATGCAGCAAGAGGAAAACAGAGGACGTGGAGAGCAT GGGACAAAGAAGCAGAACAAGAAGAAAAGGGCATCCAAGGAGCAGCGCATAGCCGTGCCTCTATCTCAGCTGGAG CCCTCGTCGCGCAAGAAGAGGGGCATGCAAACCCAGGCCAAGGAGCCGCAGCAAGATGACTTGGCGCGGCACAGC TCAGGGGCGCAGGCGCGTCAAGGCAGCGCGCCTCGTGTCTATCCCCCAATGGGCTATTTTGCTCCTCCTAGCTCG TCCCGCTCGCGTCAAAGATGGAGCGCCAGCCACGAGCCGAGGGCATCCCCGTTGGACTATGAATACACGGCGCAT CCCAGTGCCAGCAGCCGCCACGTGTCCGACTCGGCAGCGCGACTGCAGCAAAGGCAAGCATTGTCGCGTCAAGCG CCGCCAAGCCGAGCTTCCTTTGATCCCCTTGGCAACCAGACGGGCGCGCGTGCCTCGAGGCGATACACATCGGAC CCAGCAGAGGTAGCCTATACACGGGACCGTGGAGGCGCAGCCCACGGTGTGCGCGACACGAGCGAGACGTCGAGT GCGACGAGTGTAGAGAGTCCTGGCAATGAAAGCGACGGACATCAAAGGCCACCTGCAGCGACACGGGCGGAAGCG GTGTCTGTGGCGCCAGGGTGGGACAAGACTGGCAAGAAGAAGTCGCCGCCGTCGGTGCCAGGAAAGAGGAGAGAC GAGGCTTCGGGAAGTGGGCGGAGGAAAAGGTAG
Gene	>OphauG2\|1942 ATGTCTCGCATCCAGGTTCCCCTCGACGTCCTGACGTCGCGCCTCAACATTGGCCAACGCTTCCAGGGCTTACGC TCTGGCCCCCTGACGGGCCGCTTCTCCAACCTGCGCCCCATCTCCGAGTTCTTTGATTTCAAACGCCTCTCCAAG CCTGCAAACTTTGGTGACATGCAATCGCGTGTCAACTACAACCTTGCCCACTTTTCAAGCAACTATGCCGTCGTC TTTGCCATGCTGAGCATCTACGCTTTATTGACCAACTGGCTGCTGCTCTTTGATATTGTCCTGGTCCTGGCCGGC GTCTTCCTCATTGGCCGTCTCGAGGGCCGCGACCTTGAAATCGGCTCCTTTCGTGCCTCTTCCTCCCAGCTTTAC ACTGGCCTCATTGTTGTTGCCGTGCCTCTGGGTCTCATAGCCTCTCCCTTTTCTACCCTCCTCTGGCTTATTGGC GCTTCTGGCGTAGCAATACTTGGCCACGCATCATTCATGGACAAGCCCATCGATGAGGCTTTTTCTGGGGAGGCG GCTTAGATGGTCGGCCGCGAGCTCCCAAATTTGCGCCCCAATGGGGAAGACCATCGAGGCGCAGCCGGCCGCGGA CGGATGGCGACGCTGCGCTTCGCGACCCGTGGCTCCATGAGGCACGGGTCAGGATTCAGGAACTGGACACGGACC CTGGCGACGATAGCGACGCAAGTGGTTCCGAGTCGCGCTTTGTCAGCGATTCTCTTTTATTTACAGGCATAGATT TGGGCGACAGGAACAAGGGTGTGGCGCGCCGCAGACATTTGCTAGATTCCCAGGATGACGAGGACCCGCGTGGCT CCAGCACGTCGAGCGACGATGCATTCCCACAGGAAGCTGGAGAGAGACAAGTGGCATTGGTACAATCTGCACTGC ATCGCATTGCTCGAGCGCAGGCCAAAGGCAAAGCCGACGTGAGGCTTAGCAAGCAGGAACTCGAGGCATTGGAAC GGCGAAGACTGCGCATGCAGCAAGAGGAAAACAGAGGACGTGGAGAGCATGGGACAAAGAAGCAGAACAAGAAGA AAAGGGCATCCAAGGAGCAGCGCATAGCCGTGCCTCTATCTCAGCTGGAGCCCTCGTCGCGCAAGAAGAGGGGCA TGCAAACCCAGGCCAAGGAGCCGCAGCAAGATGACTTGGCGCGGCACAGCTCAGGGGCGCAGGCGCGTCAAGGCA GCGCGCCTCGTGTCTATCCCCCAATGGGCTATTTTGCTCCTCCTAGCTCGTCCCGCTCGCGTCAAAGATGGAGCG CCAGCCACGAGCCGAGGGCATCCCCGTTGGACTATGAATACACGGCGCATCCCAGTGCCAGCAGCCGCCACGTGT CCGACTCGGCAGCGCGACTGCAGCAAAGGCAAGCATTGTCGCGTCAAGCGCCGCCAAGCCGAGCTTCCTTTGATC CCCTTGGCAACCAGACGGGCGCGCGTGCCTCGAGGCGATACACATCGGACCCAGCAGAGGTAGCCTATACACGGG ACCGTGGAGGCGCAGCCCACGGTGTGCGCGACACGAGCGAGACGTCGAGTGCGACGAGTGTAGAGAGTCCTGGCA ATGAAAGCGACGGACATCAAAGGCCACCTGCAGCGACACGGGCGGAAGCGGTGTCTGTGGCGCCAGGGTGGGACA AGACTGGCAAGAAGAAGTCGCCGCCGTCGGTGCCAGGAAAGAGGAGAGACGAGGCTTCGGGAAGTGGGCGGAGGA AAAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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