Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1920
Gene name
LocationContig_162:10851..12087
Strand-
Gene length (bp)1236
Transcript length (bp)1056
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 3.5E-36 68 319

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2 3 324 4.0E-63

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 150 172 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1920
MHLSLLRSLPDCSDWSLTVQPFIPQLHALPSRLLDAGDLDGLRQLYVNTNPLVSAFAFSIALGFVFLILSETTRN
YSQVDRMWSLLPNLYIVHLAVWARLAGLPHRRIDLIAISTTLWSCRLTFNYWRRGGYQVGSEDYRWAIIKAKVPA
VLFFFFNMTFISFIQSILLFAFSCPPAYAILLSSRFEPDITPGDLVYFTIELVFIASEWFSDGQQWIYQTAKSQY
NKDAKLPKGFRQTDLDRGFITSGLWAYSRHPNFFAEQSFWFMLYQWSCFATKSTYNWTFVGAASLILLFQGSTWL
TETITAAKYPEYSEYQRQVGMFSPCSFKRYAPPLDKSNGIKASELGKRKQK*
Coding >OphauG2|1920
ATGCATCTTTCTCTGCTCAGGTCCCTACCGGACTGCAGCGACTGGTCTCTCACCGTCCAGCCATTTATCCCCCAG
CTCCACGCGTTGCCGTCGCGTCTGCTCGACGCTGGAGACCTCGACGGCCTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCGTGTCGGCCTTTGCTTTCTCCATCGCCCTTGGCTTCGTCTTTCTCATTCTCTCCGAGACCACTCGTAAT
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATTTGTACATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCATAGACGCATCGATCTCATTGCCATCAGCACTACGCTCTGGAGTTGCCGATTAACCTTTAAT
TATTGGCGCAGAGGAGGTTACCAGGTCGGCTCCGAGGACTATAGATGGGCAATCATCAAGGCCAAGGTCCCTGCT
GTTCTTTTCTTCTTCTTCAACATGACCTTCATCTCCTTTATACAGAGCATTCTTCTATTCGCCTTTTCTTGCCCT
CCAGCCTACGCCATTTTGCTCTCGTCGCGCTTTGAACCGGACATCACACCAGGTGACCTTGTCTACTTTACCATT
GAGCTCGTTTTTATCGCTAGTGAATGGTTTAGCGACGGACAGCAGTGGATTTACCAGACCGCCAAGTCGCAGTAT
AACAAAGACGCCAAGCTTCCAAAGGGATTTAGACAGACAGACCTCGATCGCGGCTTCATCACGTCTGGTCTATGG
GCCTACAGCAGGCATCCCAACTTCTTTGCCGAACAGAGCTTTTGGTTCATGCTGTATCAATGGAGCTGTTTTGCC
ACCAAATCCACATATAATTGGACTTTTGTCGGCGCCGCAAGCCTCATCTTACTCTTTCAAGGCTCAACCTGGCTG
ACCGAGACCATCACTGCTGCCAAGTACCCCGAGTATTCAGAATACCAGCGCCAAGTGGGTATGTTTTCGCCATGC
TCCTTCAAACGCTACGCACCGCCCTTGGACAAGTCCAATGGTATTAAAGCAAGCGAGCTCGGTAAGAGGAAGCAA
AAGTGA
Transcript >OphauG2|1920
ATGCATCTTTCTCTGCTCAGGTCCCTACCGGACTGCAGCGACTGGTCTCTCACCGTCCAGCCATTTATCCCCCAG
CTCCACGCGTTGCCGTCGCGTCTGCTCGACGCTGGAGACCTCGACGGCCTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCGTGTCGGCCTTTGCTTTCTCCATCGCCCTTGGCTTCGTCTTTCTCATTCTCTCCGAGACCACTCGTAAT
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATTTGTACATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCATAGACGCATCGATCTCATTGCCATCAGCACTACGCTCTGGAGTTGCCGATTAACCTTTAAT
TATTGGCGCAGAGGAGGTTACCAGGTCGGCTCCGAGGACTATAGATGGGCAATCATCAAGGCCAAGGTCCCTGCT
GTTCTTTTCTTCTTCTTCAACATGACCTTCATCTCCTTTATACAGAGCATTCTTCTATTCGCCTTTTCTTGCCCT
CCAGCCTACGCCATTTTGCTCTCGTCGCGCTTTGAACCGGACATCACACCAGGTGACCTTGTCTACTTTACCATT
GAGCTCGTTTTTATCGCTAGTGAATGGTTTAGCGACGGACAGCAGTGGATTTACCAGACCGCCAAGTCGCAGTAT
AACAAAGACGCCAAGCTTCCAAAGGGATTTAGACAGACAGACCTCGATCGCGGCTTCATCACGTCTGGTCTATGG
GCCTACAGCAGGCATCCCAACTTCTTTGCCGAACAGAGCTTTTGGTTCATGCTGTATCAATGGAGCTGTTTTGCC
ACCAAATCCACATATAATTGGACTTTTGTCGGCGCCGCAAGCCTCATCTTACTCTTTCAAGGCTCAACCTGGCTG
ACCGAGACCATCACTGCTGCCAAGTACCCCGAGTATTCAGAATACCAGCGCCAAGTGGGTATGTTTTCGCCATGC
TCCTTCAAACGCTACGCACCGCCCTTGGACAAGTCCAATGGTATTAAAGCAAGCGAGCTCGGTAAGAGGAAGCAA
AAGTGA
Gene >OphauG2|1920
ATGCATCTTTCTCTGCTCAGGTCCCTACCGGACTGCAGCGACTGGTCTCTCACCGTCCAGCCATTTATCCCCCAG
CTCCACGCGTTGCCGTCGCGTCTGCTCGACGCTGGAGACCTCGACGGCCTGAGGCAGCTCTACGTCAACACCAAC
CCCCTCGTGTCGGCCTTTGCTTTCTCCATCGCCCTTGGCTTCGTCTTTCTCATTCTCTCCGAGACCACTCGTAAT
TACTCCCAAGTTGACCGCATGTGGAGTCTTTTGCCCAATTTGTACATTGTCCATCTTGCCGTATGGGCACGTCTG
GCTGGCCTGCCTCATAGACGCATCGATCTCATTGCCATCAGCACTACGCTCTGGAGTGTATGACAAGACGCTGCC
TTTTCTCCCCTGCTCAACCAAGCTCACACCTGTAAACAGTGCCGATTAACCTTTAATTATTGGCGCAGAGGAGGT
TACCAGGTCGGCTCCGAGGACTATAGATGGTGAGATGATTGCCAAGCCCATGTATTGCCGTCTGGACACTGATGC
GCGGCTCTTCAGGGCAATCATCAAGGCCAAGGTCCCTGCTGTTCTTTTCTTCTTCTTCAACATGACCTTCATCTC
CTTTATACAGAGCATTCTTCTATTCGCCTTTTCTTGCCCTCCAGCCTACGCCATTTTGCTCTCGTCGCGCTTTGA
ACCGGACATCACACCAGGTGACCTTGTCTACTTTACCATTGAGCTCGTTTTTATCGCTAGTGAATGGTTTAGCGA
CGGACAGCAGTGGAGTAGGTTGCATTCCACCACGGCTATCCTATCAATGTGCGAAAGGGTTGCTAATGCGACTGG
TCAGTTTACCAGACCGCCAAGTCGCAGTATAACAAAGACGCCAAGCTTCCAAAGGGATTTAGACAGACAGACCTC
GATCGCGGCTTCATCACGTCTGGTCTATGGGCCTACAGCAGGCATCCCAACTTCTTTGCCGAACAGAGCTTTTGG
TTCATGCTGTATCAATGGAGCTGTTTTGCCACCAAATCCACATATAATTGGACTTTTGTCGGCGCCGCAAGCCTC
ATCTTACTCTTTCAAGGCTCAACCTGGCTGACCGAGACCATCACTGCTGCCAAGTACCCCGAGTATTCAGAATAC
CAGCGCCAAGTGGGTATGTTTTCGCCATGCTCCTTCAAACGCTACGCACCGCCCTTGGACAAGTCCAATGGTATT
AAAGCAAGCGAGCTCGGTAAGAGGAAGCAAAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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