Protein ID | OphauG2|1863 |
Gene name | |
Location | Contig_16:18930..20481 |
Strand | + |
Gene length (bp) | 1551 |
Transcript length (bp) | 1551 |
Coding sequence length (bp) | 1551 |
Protein length (aa) | 517 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06101 | Vps62 | Vacuolar protein sorting-associated protein 62 | 7.3E-10 | 314 | 376 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06466|TDA6_YEAST | Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1 | 111 | 501 | 3.0E-54 |
sp|P53285|VPS62_YEAST | Vacuolar protein sorting-associated protein 62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS62 PE=1 SV=1 | 256 | 498 | 7.0E-46 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 34 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|1863 MTWLTRCSLGLVLLAVFSLVALVVPSLLDPTAASPEKRLRDRLWINSSPYFVDRQLCRWLGLCGLQHLRKDAAAL DESAIVDEVWGELRRRALEDQGPGASKQQQQRRRRQKQRRVLKDVPDYVVKHAPLVHLYSGEEFWPSDIREHLEH MDVEIDNVVVNATDPWSLDNLAQLNRRPGSLSLHSRDDVESRPAWLHSRQNTPNDFPDDAGGAHHAPKLGSADDA TAGGEPTTWFDVDKQHPLRRIVPPRSSKKAKGPAPGEPRVFGRGHKPDAAGYSRAPAVLILVDKGSGIVDAFWFY FYSYNLGQTVFGIRFGNHVGDWEHCMVRFEHGVPRGIYFSEHEGGQAYAWEAVEKRGERPVIYSAVGSHAMYALP GDHAYILPFGLLKDVTDKGPLWDPALNNYAYHYDATRGDDHVEKDDEDDDDDDDKQHGPSHSLTPAAKNPNAPTS WFHYRGHWGDELYYLADPRQWRLFGQYHYVTGPTGPKFKELTRSKLCRGTRCRILHRLDPNGKWYS* |
Coding | >OphauG2|1863 ATGACGTGGCTCACGCGCTGCTCCCTTGGGCTGGTGCTCCTTGCCGTCTTTTCCCTCGTTGCACTCGTCGTGCCT AGTTTGCTGGACCCAACGGCCGCGTCTCCCGAGAAGCGTTTGCGTGATCGCCTCTGGATCAATAGCAGCCCTTAT TTTGTCGACCGCCAGCTTTGTCGCTGGCTTGGCCTTTGTGGCTTGCAGCATCTGCGCAAAGATGCCGCTGCGCTG GACGAGAGTGCCATTGTCGACGAGGTTTGGGGCGAGTTGAGGCGGCGTGCTCTAGAGGACCAAGGGCCTGGCGCG TCCAAGCAGCAACAGCAGCGCCGCCGCCGCCAAAAACAGCGACGCGTTTTGAAAGACGTGCCCGACTATGTCGTC AAGCACGCGCCCCTCGTGCATCTCTACTCGGGCGAAGAGTTTTGGCCGTCGGATATCCGAGAGCATCTGGAGCAC ATGGATGTCGAGATTGACAATGTTGTTGTCAACGCCACCGACCCGTGGTCCCTGGACAATTTGGCCCAGCTCAAC CGCCGCCCCGGCTCTCTCTCGCTACACAGCCGCGACGACGTCGAGTCGCGCCCCGCCTGGCTACACAGCCGACAA AACACTCCCAATGACTTCCCCGACGACGCGGGAGGCGCCCATCACGCGCCAAAGCTCGGCTCTGCAGACGACGCC ACGGCAGGCGGCGAGCCAACAACGTGGTTCGACGTGGACAAGCAGCACCCGCTGCGCCGCATCGTGCCGCCTCGC AGCTCTAAAAAGGCAAAGGGGCCCGCTCCCGGCGAGCCCCGTGTCTTTGGGCGTGGCCACAAGCCAGACGCTGCG GGATACTCGCGCGCTCCCGCCGTCCTCATCCTTGTCGACAAGGGCTCGGGCATTGTCGACGCCTTTTGGTTCTAT TTTTACTCGTACAACCTCGGGCAGACCGTCTTTGGCATTCGCTTCGGCAACCACGTGGGCGATTGGGAGCACTGC ATGGTGCGCTTTGAGCATGGCGTTCCCCGCGGCATCTACTTTTCCGAGCACGAGGGCGGACAGGCCTATGCCTGG GAGGCGGTGGAGAAGCGCGGCGAGCGGCCCGTCATTTACTCTGCCGTTGGCTCTCACGCCATGTACGCGCTGCCG GGCGACCACGCCTACATCCTCCCCTTTGGGCTGCTCAAGGACGTGACGGACAAGGGGCCGCTCTGGGATCCGGCC CTCAACAACTATGCTTATCACTATGACGCGACGCGCGGCGACGACCATGTGGAAAAGGACGACGAAGACGACGAC GACGACGACGACAAGCAACACGGCCCGTCACACAGCCTCACACCCGCAGCCAAGAACCCCAACGCCCCAACCTCG TGGTTCCACTACCGCGGCCACTGGGGCGACGAGCTCTACTACCTCGCCGACCCGCGTCAGTGGCGCCTCTTTGGC CAGTACCACTATGTGACGGGCCCCACGGGCCCCAAGTTCAAGGAACTCACACGCTCAAAGCTGTGCCGAGGCACA AGGTGCCGCATCTTGCACCGGCTGGATCCCAATGGCAAGTGGTACTCTTGA |
Transcript | >OphauG2|1863 ATGACGTGGCTCACGCGCTGCTCCCTTGGGCTGGTGCTCCTTGCCGTCTTTTCCCTCGTTGCACTCGTCGTGCCT AGTTTGCTGGACCCAACGGCCGCGTCTCCCGAGAAGCGTTTGCGTGATCGCCTCTGGATCAATAGCAGCCCTTAT TTTGTCGACCGCCAGCTTTGTCGCTGGCTTGGCCTTTGTGGCTTGCAGCATCTGCGCAAAGATGCCGCTGCGCTG GACGAGAGTGCCATTGTCGACGAGGTTTGGGGCGAGTTGAGGCGGCGTGCTCTAGAGGACCAAGGGCCTGGCGCG TCCAAGCAGCAACAGCAGCGCCGCCGCCGCCAAAAACAGCGACGCGTTTTGAAAGACGTGCCCGACTATGTCGTC AAGCACGCGCCCCTCGTGCATCTCTACTCGGGCGAAGAGTTTTGGCCGTCGGATATCCGAGAGCATCTGGAGCAC ATGGATGTCGAGATTGACAATGTTGTTGTCAACGCCACCGACCCGTGGTCCCTGGACAATTTGGCCCAGCTCAAC CGCCGCCCCGGCTCTCTCTCGCTACACAGCCGCGACGACGTCGAGTCGCGCCCCGCCTGGCTACACAGCCGACAA AACACTCCCAATGACTTCCCCGACGACGCGGGAGGCGCCCATCACGCGCCAAAGCTCGGCTCTGCAGACGACGCC ACGGCAGGCGGCGAGCCAACAACGTGGTTCGACGTGGACAAGCAGCACCCGCTGCGCCGCATCGTGCCGCCTCGC AGCTCTAAAAAGGCAAAGGGGCCCGCTCCCGGCGAGCCCCGTGTCTTTGGGCGTGGCCACAAGCCAGACGCTGCG GGATACTCGCGCGCTCCCGCCGTCCTCATCCTTGTCGACAAGGGCTCGGGCATTGTCGACGCCTTTTGGTTCTAT TTTTACTCGTACAACCTCGGGCAGACCGTCTTTGGCATTCGCTTCGGCAACCACGTGGGCGATTGGGAGCACTGC ATGGTGCGCTTTGAGCATGGCGTTCCCCGCGGCATCTACTTTTCCGAGCACGAGGGCGGACAGGCCTATGCCTGG GAGGCGGTGGAGAAGCGCGGCGAGCGGCCCGTCATTTACTCTGCCGTTGGCTCTCACGCCATGTACGCGCTGCCG GGCGACCACGCCTACATCCTCCCCTTTGGGCTGCTCAAGGACGTGACGGACAAGGGGCCGCTCTGGGATCCGGCC CTCAACAACTATGCTTATCACTATGACGCGACGCGCGGCGACGACCATGTGGAAAAGGACGACGAAGACGACGAC GACGACGACGACAAGCAACACGGCCCGTCACACAGCCTCACACCCGCAGCCAAGAACCCCAACGCCCCAACCTCG TGGTTCCACTACCGCGGCCACTGGGGCGACGAGCTCTACTACCTCGCCGACCCGCGTCAGTGGCGCCTCTTTGGC CAGTACCACTATGTGACGGGCCCCACGGGCCCCAAGTTCAAGGAACTCACACGCTCAAAGCTGTGCCGAGGCACA AGGTGCCGCATCTTGCACCGGCTGGATCCCAATGGCAAGTGGTACTCTTGA |
Gene | >OphauG2|1863 ATGACGTGGCTCACGCGCTGCTCCCTTGGGCTGGTGCTCCTTGCCGTCTTTTCCCTCGTTGCACTCGTCGTGCCT AGTTTGCTGGACCCAACGGCCGCGTCTCCCGAGAAGCGTTTGCGTGATCGCCTCTGGATCAATAGCAGCCCTTAT TTTGTCGACCGCCAGCTTTGTCGCTGGCTTGGCCTTTGTGGCTTGCAGCATCTGCGCAAAGATGCCGCTGCGCTG GACGAGAGTGCCATTGTCGACGAGGTTTGGGGCGAGTTGAGGCGGCGTGCTCTAGAGGACCAAGGGCCTGGCGCG TCCAAGCAGCAACAGCAGCGCCGCCGCCGCCAAAAACAGCGACGCGTTTTGAAAGACGTGCCCGACTATGTCGTC AAGCACGCGCCCCTCGTGCATCTCTACTCGGGCGAAGAGTTTTGGCCGTCGGATATCCGAGAGCATCTGGAGCAC ATGGATGTCGAGATTGACAATGTTGTTGTCAACGCCACCGACCCGTGGTCCCTGGACAATTTGGCCCAGCTCAAC CGCCGCCCCGGCTCTCTCTCGCTACACAGCCGCGACGACGTCGAGTCGCGCCCCGCCTGGCTACACAGCCGACAA AACACTCCCAATGACTTCCCCGACGACGCGGGAGGCGCCCATCACGCGCCAAAGCTCGGCTCTGCAGACGACGCC ACGGCAGGCGGCGAGCCAACAACGTGGTTCGACGTGGACAAGCAGCACCCGCTGCGCCGCATCGTGCCGCCTCGC AGCTCTAAAAAGGCAAAGGGGCCCGCTCCCGGCGAGCCCCGTGTCTTTGGGCGTGGCCACAAGCCAGACGCTGCG GGATACTCGCGCGCTCCCGCCGTCCTCATCCTTGTCGACAAGGGCTCGGGCATTGTCGACGCCTTTTGGTTCTAT TTTTACTCGTACAACCTCGGGCAGACCGTCTTTGGCATTCGCTTCGGCAACCACGTGGGCGATTGGGAGCACTGC ATGGTGCGCTTTGAGCATGGCGTTCCCCGCGGCATCTACTTTTCCGAGCACGAGGGCGGACAGGCCTATGCCTGG GAGGCGGTGGAGAAGCGCGGCGAGCGGCCCGTCATTTACTCTGCCGTTGGCTCTCACGCCATGTACGCGCTGCCG GGCGACCACGCCTACATCCTCCCCTTTGGGCTGCTCAAGGACGTGACGGACAAGGGGCCGCTCTGGGATCCGGCC CTCAACAACTATGCTTATCACTATGACGCGACGCGCGGCGACGACCATGTGGAAAAGGACGACGAAGACGACGAC GACGACGACGACAAGCAACACGGCCCGTCACACAGCCTCACACCCGCAGCCAAGAACCCCAACGCCCCAACCTCG TGGTTCCACTACCGCGGCCACTGGGGCGACGAGCTCTACTACCTCGCCGACCCGCGTCAGTGGCGCCTCTTTGGC CAGTACCACTATGTGACGGGCCCCACGGGCCCCAAGTTCAAGGAACTCACACGCTCAAAGCTGTGCCGAGGCACA AGGTGCCGCATCTTGCACCGGCTGGATCCCAATGGCAAGTGGTACTCTTGA |