© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1827 |
| Gene name | |
| Location | Contig_1585:43..529 |
| Strand | - |
| Gene length (bp) | 486 |
| Transcript length (bp) | 486 |
| Coding sequence length (bp) | 486 |
| Protein length (aa) | 162 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01151 | ELO | GNS1/SUR4 family | 2.4E-14 | 52 | 138 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTF7|ELOH1_SCHPO | Putative elongation of fatty acids protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B2.03c PE=1 SV=1 | 14 | 141 | 1.0E-30 |
| sp|P39540|ELO1_YEAST | Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1 | 14 | 141 | 1.0E-27 |
| sp|P40319|ELO3_YEAST | Elongation of fatty acids protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO3 PE=1 SV=1 | 1 | 141 | 5.0E-24 |
| sp|P25358|ELO2_YEAST | Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO2 PE=1 SV=1 | 13 | 141 | 8.0E-24 |
| sp|Q7LKX0|ELOH2_SCHPO | Putative elongation of fatty acids protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1639.01c PE=3 SV=3 | 24 | 141 | 2.0E-18 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0009922 | fatty acid elongase activity | Yes |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0004312 | fatty acid synthase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 58 | 75 | 17 |
| 2 | 88 | 110 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1827 MSSPSSFYEQLPLPTIDRPFGIHLWPIFDKAWTALVGYPVKDFEFVPFETPMSTLKSTAIFIVVYYTIILGGREL MRHREPFKLKKLFLIHNFYLTAISAVLLALFIEQLLPTVVRRGLFHAICHHDGGWTQPLVVLYYVGLPPPPAALC RLVLALTSFLS* |
| Coding | >OphauG2|1827 ATGTCGTCTCCCTCCTCCTTTTACGAGCAGCTGCCTCTGCCCACCATCGACCGGCCCTTTGGCATCCACCTATGG CCCATCTTCGATAAGGCTTGGACGGCCCTTGTTGGCTACCCGGTAAAAGACTTCGAGTTCGTTCCGTTTGAGACG CCCATGTCCACGCTCAAGTCGACGGCCATCTTCATCGTCGTCTACTACACCATAATTCTGGGTGGGAGAGAGCTG ATGCGCCATCGCGAACCCTTCAAGCTCAAGAAGCTCTTTCTCATCCACAACTTTTACCTGACAGCTATTAGCGCC GTTTTGCTGGCCCTCTTCATTGAGCAGCTGTTGCCCACTGTTGTGCGTCGTGGTCTTTTCCACGCCATTTGCCAC CATGACGGCGGCTGGACACAGCCTCTTGTTGTCCTGTACTATGTCGGTTTACCCCCTCCCCCCGCTGCCTTGTGT CGTCTTGTTCTCGCGCTGACCAGCTTCCTCTCTTAG |
| Transcript | >OphauG2|1827 ATGTCGTCTCCCTCCTCCTTTTACGAGCAGCTGCCTCTGCCCACCATCGACCGGCCCTTTGGCATCCACCTATGG CCCATCTTCGATAAGGCTTGGACGGCCCTTGTTGGCTACCCGGTAAAAGACTTCGAGTTCGTTCCGTTTGAGACG CCCATGTCCACGCTCAAGTCGACGGCCATCTTCATCGTCGTCTACTACACCATAATTCTGGGTGGGAGAGAGCTG ATGCGCCATCGCGAACCCTTCAAGCTCAAGAAGCTCTTTCTCATCCACAACTTTTACCTGACAGCTATTAGCGCC GTTTTGCTGGCCCTCTTCATTGAGCAGCTGTTGCCCACTGTTGTGCGTCGTGGTCTTTTCCACGCCATTTGCCAC CATGACGGCGGCTGGACACAGCCTCTTGTTGTCCTGTACTATGTCGGTTTACCCCCTCCCCCCGCTGCCTTGTGT CGTCTTGTTCTCGCGCTGACCAGCTTCCTCTCTTAG |
| Gene | >OphauG2|1827 ATGTCGTCTCCCTCCTCCTTTTACGAGCAGCTGCCTCTGCCCACCATCGACCGGCCCTTTGGCATCCACCTATGG CCCATCTTCGATAAGGCTTGGACGGCCCTTGTTGGCTACCCGGTAAAAGACTTCGAGTTCGTTCCGTTTGAGACG CCCATGTCCACGCTCAAGTCGACGGCCATCTTCATCGTCGTCTACTACACCATAATTCTGGGTGGGAGAGAGCTG ATGCGCCATCGCGAACCCTTCAAGCTCAAGAAGCTCTTTCTCATCCACAACTTTTACCTGACAGCTATTAGCGCC GTTTTGCTGGCCCTCTTCATTGAGCAGCTGTTGCCCACTGTTGTGCGTCGTGGTCTTTTCCACGCCATTTGCCAC CATGACGGCGGCTGGACACAGCCTCTTGTTGTCCTGTACTATGTCGGTTTACCCCCTCCCCCCGCTGCCTTGTGT CGTCTTGTTCTCGCGCTGACCAGCTTCCTCTCTTAG |