© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1823 |
| Gene name | |
| Location | Contig_1580:1165..2312 |
| Strand | + |
| Gene length (bp) | 1147 |
| Transcript length (bp) | 912 |
| Coding sequence length (bp) | 912 |
| Protein length (aa) | 304 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02077 | SURF4 | SURF4 family | 7.7E-99 | 40 | 303 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74559|SURF4_SCHPO | Surfeit locus protein 4 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.06 PE=3 SV=1 | 22 | 303 | 2.0E-90 |
| sp|P53337|ERV29_YEAST | ER-derived vesicles protein ERV29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV29 PE=1 SV=1 | 1 | 303 | 7.0E-73 |
| sp|O18405|SURF4_DROME | Surfeit locus protein 4 homolog OS=Drosophila melanogaster GN=Surf4 PE=2 SV=1 | 39 | 301 | 4.0E-61 |
| sp|Q5R705|SURF4_PONAB | Surfeit locus protein 4 OS=Pongo abelii GN=SURF4 PE=2 SV=1 | 44 | 303 | 2.0E-54 |
| sp|O15260|SURF4_HUMAN | Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 PE=1 SV=3 | 44 | 303 | 2.0E-54 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74559|SURF4_SCHPO | Surfeit locus protein 4 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC970.06 PE=3 SV=1 | 22 | 303 | 2.0E-90 |
| sp|P53337|ERV29_YEAST | ER-derived vesicles protein ERV29 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV29 PE=1 SV=1 | 1 | 303 | 7.0E-73 |
| sp|O18405|SURF4_DROME | Surfeit locus protein 4 homolog OS=Drosophila melanogaster GN=Surf4 PE=2 SV=1 | 39 | 301 | 4.0E-61 |
| sp|Q5R705|SURF4_PONAB | Surfeit locus protein 4 OS=Pongo abelii GN=SURF4 PE=2 SV=1 | 44 | 303 | 2.0E-54 |
| sp|O15260|SURF4_HUMAN | Surfeit locus protein 4 OS=Homo sapiens GN=SURF4 PE=1 SV=3 | 44 | 303 | 2.0E-54 |
| sp|A7YY49|SURF4_BOVIN | Surfeit locus protein 4 OS=Bos taurus GN=SURF4 PE=2 SV=1 | 44 | 303 | 4.0E-54 |
| sp|Q64310|SURF4_MOUSE | Surfeit locus protein 4 OS=Mus musculus GN=Surf4 PE=1 SV=1 | 44 | 303 | 7.0E-54 |
| sp|O57590|SURF4_TAKRU | Surfeit locus protein 4 OS=Takifugu rubripes GN=surf4 PE=3 SV=1 | 41 | 303 | 8.0E-54 |
| sp|Q800K9|SURF4_CHICK | Surfeit locus protein 4 OS=Gallus gallus GN=SURF4 PE=2 SV=1 | 41 | 303 | 3.0E-53 |
| sp|Q7SZQ7|SURF4_DANRE | Surfeit locus protein 4 OS=Danio rerio GN=surf4 PE=2 SV=1 | 41 | 303 | 5.0E-52 |
| sp|Q18864|SURF4_CAEEL | Surfeit locus protein 4 homolog OS=Caenorhabditis elegans GN=sft-4 PE=2 SV=1 | 41 | 303 | 1.0E-49 |
| sp|O45731|YFC7_CAEEL | Uncharacterized protein T02E1.7 OS=Caenorhabditis elegans GN=T02E1.7 PE=3 SV=1 | 41 | 301 | 6.0E-33 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 97 | 119 | 22 |
| 2 | 126 | 145 | 19 |
| 3 | 149 | 168 | 19 |
| 4 | 188 | 207 | 19 |
| 5 | 211 | 233 | 22 |
| 6 | 240 | 259 | 19 |
| 7 | 274 | 296 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1823 MSQRGPSGYGLGGPGPASYGSSQQADESTGNLLDQIRPYTSKVEDIMDSFSEPIKPYLPAIGRFLIVVTFLEDAL RIMTQWKDQLIYLHDYRNIPSGITHLFLLLNVVAMIICSGLVIIRKHSDYAVAGLIGVVITQALGYGLIFDLNFF LRNLSVMGGLLMVLSDSWVRKTKAFAGLPQIDEKDRKMYFQLAGRVLLIFLFIGFVFSGKWSLWRIIVCILGAGA CIMVVVGFKAKFSAILLVVILSIFNLLVNNFWTLHEHHPHKDFAKYDFFQILSIVGGLLLLVNSGPGQFSIDEKK KVY* |
| Coding | >OphauG2|1823 ATGTCGCAGCGCGGTCCTTCTGGCTACGGCCTCGGCGGCCCGGGCCCCGCGTCATATGGGAGCTCGCAACAGGCT GACGAGTCGACGGGCAACTTGCTTGACCAGATTCGCCCCTATACTAGCAAGGTGGAGGATATCATGGATAGCTTC AGCGAACCCATCAAGCCCTATCTGCCTGCCATTGGCCGCTTCCTCATTGTCGTGACGTTTCTCGAGGATGCGCTG CGCATCATGACACAATGGAAGGATCAGCTCATTTACCTCCACGACTACCGCAACATCCCCAGCGGAATCACGCAC TTGTTCCTGCTCCTCAACGTCGTTGCCATGATTATATGCTCTGGCCTCGTTATTATTCGCAAGCACTCGGACTAT GCCGTCGCCGGCCTCATTGGCGTTGTCATTACGCAAGCTCTCGGCTACGGTCTCATTTTTGACCTCAACTTCTTC CTCCGCAACCTGTCCGTCATGGGCGGGCTGCTCATGGTGCTTTCCGATTCGTGGGTCCGCAAAACAAAGGCCTTT GCCGGCCTGCCTCAGATTGACGAAAAGGACCGCAAAATGTACTTTCAGCTAGCTGGGCGCGTCCTGCTCATTTTT CTCTTTATTGGCTTCGTCTTTAGCGGCAAATGGTCCCTGTGGCGCATCATTGTCTGCATCCTTGGCGCGGGCGCC TGCATCATGGTTGTCGTTGGCTTCAAGGCCAAGTTTAGCGCCATTCTTCTCGTTGTCATTCTTAGCATCTTTAAT CTGCTTGTGAACAATTTCTGGACGTTGCACGAGCACCACCCGCACAAGGATTTTGCAAAGTACGACTTTTTCCAA ATCCTCTCCATTGTCGGCGGTCTCTTGCTCCTAGTCAACAGCGGTCCCGGCCAGTTTAGCATCGACGAAAAGAAG AAGGTGTATTAA |
| Transcript | >OphauG2|1823 ATGTCGCAGCGCGGTCCTTCTGGCTACGGCCTCGGCGGCCCGGGCCCCGCGTCATATGGGAGCTCGCAACAGGCT GACGAGTCGACGGGCAACTTGCTTGACCAGATTCGCCCCTATACTAGCAAGGTGGAGGATATCATGGATAGCTTC AGCGAACCCATCAAGCCCTATCTGCCTGCCATTGGCCGCTTCCTCATTGTCGTGACGTTTCTCGAGGATGCGCTG CGCATCATGACACAATGGAAGGATCAGCTCATTTACCTCCACGACTACCGCAACATCCCCAGCGGAATCACGCAC TTGTTCCTGCTCCTCAACGTCGTTGCCATGATTATATGCTCTGGCCTCGTTATTATTCGCAAGCACTCGGACTAT GCCGTCGCCGGCCTCATTGGCGTTGTCATTACGCAAGCTCTCGGCTACGGTCTCATTTTTGACCTCAACTTCTTC CTCCGCAACCTGTCCGTCATGGGCGGGCTGCTCATGGTGCTTTCCGATTCGTGGGTCCGCAAAACAAAGGCCTTT GCCGGCCTGCCTCAGATTGACGAAAAGGACCGCAAAATGTACTTTCAGCTAGCTGGGCGCGTCCTGCTCATTTTT CTCTTTATTGGCTTCGTCTTTAGCGGCAAATGGTCCCTGTGGCGCATCATTGTCTGCATCCTTGGCGCGGGCGCC TGCATCATGGTTGTCGTTGGCTTCAAGGCCAAGTTTAGCGCCATTCTTCTCGTTGTCATTCTTAGCATCTTTAAT CTGCTTGTGAACAATTTCTGGACGTTGCACGAGCACCACCCGCACAAGGATTTTGCAAAGTACGACTTTTTCCAA ATCCTCTCCATTGTCGGCGGTCTCTTGCTCCTAGTCAACAGCGGTCCCGGCCAGTTTAGCATCGACGAAAAGAAG AAGGTGTATTAA |
| Gene | >OphauG2|1823 ATGTCGCAGCGCGGTCCTTCTGGCTACGGCCTCGGCGGCCCGGGCCCCGCGTCATATGGGAGCTCGCAACAGGCT GACGAGTCGACGGGCAACTTGCTTGACCAGATTCGCCCCTATACTAGCAAGGTGGAGGATATCATGGATAGCTTC AGCGAACCCATCAAGCCGTGCGTCTAGACTCTGCTTTGTAGTGGTTGCTTCTCGCTGATGTGGCTCTTGGTTTTT TTGCAGCTATCTGCCTGCCATTGGCCGCTTCCTCATTGTCGTGACGTTTCTCGAGGATGCGCTGCGCATCATGAC ACAATGGAAGGATCAGCTCATTTACCTCCACGACTACCGCAACAGTGAGCACCAAGCCTAGTACAGCTAATGAAG CTCAAGGACTAGCTAACGGCCTCCCCCTTTTTTCTCTCTCTCTTGCTGCTCTCCAGTCCCCAGCGGAATCACGCA CTTGTTCCTGCTCCTCAACGTCGTTGCCATGATTATATGCTCTGGCCTCGTTATTATTCGCAAGCACTCGGACTA TGCCGTCGCCGGCCTCATTGGCGTTGTCATTACGCAAGCTCTCGGCTACGGTCTCATTTTTGACCTCAACTTCTT CCTCCGCAACCTGTCCGTCATGGGCGGGCTGCTCATGGTGCTTTCCGATTCGTGGGTCCGCAAAACAAAGGCCTT TGCCGGCCTGCCTCAGATTGACGAAAAGGACCGCAAAATGTACTTTCAGCTAGCTGGGCGCGTCCTGCTCATTTT TCTCTTTATTGGCTTCGTCTTTAGCGGCAAATGGTCCCTGTGGCGCATCATTGTCTGCATCCTTGGCGCGGGCGC CTGCATCATGGTTGTCGTTGGCTTCAAGGCCAAGTTTAGCGCCATTCTTCTCGTTGTCATTCTTAGCATCTTTAA TCTGCTTGTGAACAATTTCTGGACGGTGAGTCAAAAAAACCCACAAGGTTACACAATTGGCTCATGTCGACACGG ATTTGCTGATGTTTTTCGTCCTTGTCAAATCTAGTTGCACGAGCACCACCCGCACAAGGATTTTGCAAAGTACGA CTTTTTCCAAATCCTCTCCATTGTCGGCGGTCTCTTGCTCCTAGTCAACAGCGGTCCCGGCCAGTTTAGCATCGA CGAAAAGAAGAAGGTGTATTAA |