Protein ID | OphauG2|180 |
Gene name | |
Location | Contig_103:18365..20018 |
Strand | - |
Gene length (bp) | 1653 |
Transcript length (bp) | 1596 |
Coding sequence length (bp) | 1596 |
Protein length (aa) | 532 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04172 | LrgB | LrgB-like family | 3.7E-15 | 236 | 416 |
PF04172 | LrgB | LrgB-like family | 2.8E-06 | 471 | 517 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 25 | 44 | 19 |
2 | 59 | 81 | 22 |
3 | 169 | 191 | 22 |
4 | 201 | 218 | 17 |
5 | 230 | 252 | 22 |
6 | 295 | 317 | 22 |
7 | 330 | 352 | 22 |
8 | 387 | 409 | 22 |
9 | 469 | 491 | 22 |
10 | 506 | 528 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|180 MTVVGWLAETSDAIYVSHIRSKVDFINSHLGMGFLIPIVTMGEHDILHGPDIARITAVFFTTNLVSWPGIFLLSF AILIIFHKLTEWTSRLNHHFAKTTTMLKSSMRKIKNSIFRIRPHVRQRQSLSTKTTPANSDMGYCISSPQSMAHA TPDVEKNCQLPTSPAWDKLAIFYPIPLSMLCTVAIGLPIAITTGDERALDGFALWFLWITSVRLVRLFKTSSLLT SNKRLKSILVTLCNPVLITTGLMMGYTRGKAAIKGVGQLQSVIETLSKGTPLRSIWTASVKGTVITSNPGAYFGA GDLALSLLECGMLVWGFKLYECRRQLFSANGGLTVIISILAAVGNVFGSVLISKAIGLGQPEILAFSARCATLAL AKPAVQALGGNIVVNAIVVVSNGVLGQLLLPFILDRFGVQTTDTEPTRKTMLDVSSSSDTLVAHQPGMHKTSQDT IQEAMDRKRAENDATTDSVMTVAMGVAVGVNGAAMGVSHLYEHKSRAAPYAVLSMTVFAIVTVVLTTVDPFKGFV LNLTKT* |
Coding | >OphauG2|180 ATGACTGTGGTCGGCTGGCTGGCTGAAACATCAGATGCAATCTATGTCAGCCACATCAGATCAAAGGTTGATTTC ATCAATTCCCACCTCGGTATGGGATTCCTCATACCCATTGTTACCATGGGTGAACACGATATCCTCCATGGCCCG GATATTGCTCGAATTACAGCAGTATTCTTTACCACCAACCTTGTCTCGTGGCCCGGCATCTTCTTGTTATCCTTC GCCATTCTTATTATATTCCACAAATTGACCGAGTGGACCTCTCGACTCAACCACCACTTTGCAAAGACAACAACC ATGCTCAAGAGCTCGATGCGGAAAATCAAAAACTCAATCTTTCGTATTCGACCACATGTCCGCCAACGCCAAAGC CTGAGCACCAAGACAACGCCAGCCAACTCAGACATGGGCTATTGCATTTCTAGCCCTCAGAGCATGGCTCACGCC ACTCCCGACGTGGAAAAAAATTGCCAGCTTCCCACATCACCGGCTTGGGATAAGCTGGCCATATTCTACCCCATT CCGCTCTCGATGCTTTGCACTGTGGCAATTGGTTTGCCCATCGCCATTACCACTGGAGATGAGAGAGCTCTCGAT GGATTCGCCCTGTGGTTCCTGTGGATCACAAGCGTTAGACTGGTGCGGCTGTTCAAAACGTCCTCTTTACTGACC TCGAATAAACGACTCAAGAGTATCCTCGTTACTCTTTGCAACCCTGTACTCATCACGACTGGGCTTATGATGGGG TACACTCGAGGCAAGGCTGCCATCAAGGGCGTGGGACAATTGCAAAGTGTTATTGAGACACTCAGCAAGGGAACG CCACTCAGAAGCATCTGGACCGCAAGCGTCAAGGGCACTGTGATCACCAGCAATCCTGGGGCCTATTTCGGAGCT GGAGACTTGGCGCTTTCGCTTCTCGAATGCGGAATGCTGGTTTGGGGATTCAAACTCTATGAGTGCCGTCGCCAG CTATTCAGCGCCAACGGCGGCCTGACAGTCATTATTTCCATCCTGGCCGCCGTGGGCAACGTTTTCGGATCCGTC CTTATCAGCAAAGCCATTGGCCTTGGCCAACCCGAGATCTTGGCCTTTTCGGCGCGTTGCGCTACTCTCGCTCTC GCCAAGCCTGCCGTCCAGGCTCTTGGCGGCAATATTGTTGTCAACGCTATTGTTGTTGTCAGCAACGGAGTTCTG GGCCAACTCTTACTACCCTTTATCCTCGACCGCTTTGGTGTCCAGACGACGGACACAGAACCAACAAGGAAAACT ATGCTGGACGTCAGCAGCAGCAGCGACACGCTAGTCGCCCATCAGCCAGGCATGCACAAAACTTCCCAGGACACC ATTCAAGAAGCCATGGATCGAAAACGAGCCGAAAATGATGCCACAACCGATTCCGTCATGACTGTCGCAATGGGA GTGGCAGTTGGGGTCAACGGAGCTGCCATGGGGGTGTCTCACCTCTACGAACACAAGAGCCGCGCGGCGCCTTAT GCCGTTCTTTCCATGACTGTTTTTGCCATTGTCACTGTTGTCTTGACTACTGTTGACCCATTCAAAGGCTTTGTC CTGAATCTGACGAAGACCTAA |
Transcript | >OphauG2|180 ATGACTGTGGTCGGCTGGCTGGCTGAAACATCAGATGCAATCTATGTCAGCCACATCAGATCAAAGGTTGATTTC ATCAATTCCCACCTCGGTATGGGATTCCTCATACCCATTGTTACCATGGGTGAACACGATATCCTCCATGGCCCG GATATTGCTCGAATTACAGCAGTATTCTTTACCACCAACCTTGTCTCGTGGCCCGGCATCTTCTTGTTATCCTTC GCCATTCTTATTATATTCCACAAATTGACCGAGTGGACCTCTCGACTCAACCACCACTTTGCAAAGACAACAACC ATGCTCAAGAGCTCGATGCGGAAAATCAAAAACTCAATCTTTCGTATTCGACCACATGTCCGCCAACGCCAAAGC CTGAGCACCAAGACAACGCCAGCCAACTCAGACATGGGCTATTGCATTTCTAGCCCTCAGAGCATGGCTCACGCC ACTCCCGACGTGGAAAAAAATTGCCAGCTTCCCACATCACCGGCTTGGGATAAGCTGGCCATATTCTACCCCATT CCGCTCTCGATGCTTTGCACTGTGGCAATTGGTTTGCCCATCGCCATTACCACTGGAGATGAGAGAGCTCTCGAT GGATTCGCCCTGTGGTTCCTGTGGATCACAAGCGTTAGACTGGTGCGGCTGTTCAAAACGTCCTCTTTACTGACC TCGAATAAACGACTCAAGAGTATCCTCGTTACTCTTTGCAACCCTGTACTCATCACGACTGGGCTTATGATGGGG TACACTCGAGGCAAGGCTGCCATCAAGGGCGTGGGACAATTGCAAAGTGTTATTGAGACACTCAGCAAGGGAACG CCACTCAGAAGCATCTGGACCGCAAGCGTCAAGGGCACTGTGATCACCAGCAATCCTGGGGCCTATTTCGGAGCT GGAGACTTGGCGCTTTCGCTTCTCGAATGCGGAATGCTGGTTTGGGGATTCAAACTCTATGAGTGCCGTCGCCAG CTATTCAGCGCCAACGGCGGCCTGACAGTCATTATTTCCATCCTGGCCGCCGTGGGCAACGTTTTCGGATCCGTC CTTATCAGCAAAGCCATTGGCCTTGGCCAACCCGAGATCTTGGCCTTTTCGGCGCGTTGCGCTACTCTCGCTCTC GCCAAGCCTGCCGTCCAGGCTCTTGGCGGCAATATTGTTGTCAACGCTATTGTTGTTGTCAGCAACGGAGTTCTG GGCCAACTCTTACTACCCTTTATCCTCGACCGCTTTGGTGTCCAGACGACGGACACAGAACCAACAAGGAAAACT ATGCTGGACGTCAGCAGCAGCAGCGACACGCTAGTCGCCCATCAGCCAGGCATGCACAAAACTTCCCAGGACACC ATTCAAGAAGCCATGGATCGAAAACGAGCCGAAAATGATGCCACAACCGATTCCGTCATGACTGTCGCAATGGGA GTGGCAGTTGGGGTCAACGGAGCTGCCATGGGGGTGTCTCACCTCTACGAACACAAGAGCCGCGCGGCGCCTTAT GCCGTTCTTTCCATGACTGTTTTTGCCATTGTCACTGTTGTCTTGACTACTGTTGACCCATTCAAAGGCTTTGTC CTGAATCTGACGAAGACCTAA |
Gene | >OphauG2|180 ATGACTGTGGTCGGCTGGCTGGCTGAAACATCAGATGCAATCTATGTCAGCCACATCAGATCAAAGGTTAGCAGT TTGGCCCTGCTCTTCGTCTTGACAGCTCTTTCTAAATCTAGAAAACAGGTTGATTTCATCAATTCCCACCTCGGT ATGGGATTCCTCATACCCATTGTTACCATGGGTGAACACGATATCCTCCATGGCCCGGATATTGCTCGAATTACA GCAGTATTCTTTACCACCAACCTTGTCTCGTGGCCCGGCATCTTCTTGTTATCCTTCGCCATTCTTATTATATTC CACAAATTGACCGAGTGGACCTCTCGACTCAACCACCACTTTGCAAAGACAACAACCATGCTCAAGAGCTCGATG CGGAAAATCAAAAACTCAATCTTTCGTATTCGACCACATGTCCGCCAACGCCAAAGCCTGAGCACCAAGACAACG CCAGCCAACTCAGACATGGGCTATTGCATTTCTAGCCCTCAGAGCATGGCTCACGCCACTCCCGACGTGGAAAAA AATTGCCAGCTTCCCACATCACCGGCTTGGGATAAGCTGGCCATATTCTACCCCATTCCGCTCTCGATGCTTTGC ACTGTGGCAATTGGTTTGCCCATCGCCATTACCACTGGAGATGAGAGAGCTCTCGATGGATTCGCCCTGTGGTTC CTGTGGATCACAAGCGTTAGACTGGTGCGGCTGTTCAAAACGTCCTCTTTACTGACCTCGAATAAACGACTCAAG AGTATCCTCGTTACTCTTTGCAACCCTGTACTCATCACGACTGGGCTTATGATGGGGTACACTCGAGGCAAGGCT GCCATCAAGGGCGTGGGACAATTGCAAAGTGTTATTGAGACACTCAGCAAGGGAACGCCACTCAGAAGCATCTGG ACCGCAAGCGTCAAGGGCACTGTGATCACCAGCAATCCTGGGGCCTATTTCGGAGCTGGAGACTTGGCGCTTTCG CTTCTCGAATGCGGAATGCTGGTTTGGGGATTCAAACTCTATGAGTGCCGTCGCCAGCTATTCAGCGCCAACGGC GGCCTGACAGTCATTATTTCCATCCTGGCCGCCGTGGGCAACGTTTTCGGATCCGTCCTTATCAGCAAAGCCATT GGCCTTGGCCAACCCGAGATCTTGGCCTTTTCGGCGCGTTGCGCTACTCTCGCTCTCGCCAAGCCTGCCGTCCAG GCTCTTGGCGGCAATATTGTTGTCAACGCTATTGTTGTTGTCAGCAACGGAGTTCTGGGCCAACTCTTACTACCC TTTATCCTCGACCGCTTTGGTGTCCAGACGACGGACACAGAACCAACAAGGAAAACTATGCTGGACGTCAGCAGC AGCAGCGACACGCTAGTCGCCCATCAGCCAGGCATGCACAAAACTTCCCAGGACACCATTCAAGAAGCCATGGAT CGAAAACGAGCCGAAAATGATGCCACAACCGATTCCGTCATGACTGTCGCAATGGGAGTGGCAGTTGGGGTCAAC GGAGCTGCCATGGGGGTGTCTCACCTCTACGAACACAAGAGCCGCGCGGCGCCTTATGCCGTTCTTTCCATGACT GTTTTTGCCATTGTCACTGTTGTCTTGACTACTGTTGACCCATTCAAAGGCTTTGTCCTGAATCTGACGAAGACC TAA |