Protein ID | OphauG2|1762 |
Gene name | |
Location | Contig_156:354..879 |
Strand | - |
Gene length (bp) | 525 |
Transcript length (bp) | 525 |
Coding sequence length (bp) | 525 |
Protein length (aa) | 175 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14856 | Hce2 | Pathogen effector; putative necrosis-inducing factor | 7.3E-13 | 56 | 155 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 4 | 23 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|1762 MALFAFYLCLVLFVESTLVAAFPTPTYTMRRRQSCPLPFANATSLWWEPSTDAATTCDEASYADDPKLDAANWRQ CAALYSSLAGQNGSFHLSHGNNGAAVPLLSQRDCILSVLPLDADKGPYTIGMRDAEAMLGNSLRNYSRGTLLSVK GLVKCDVAGGGRAGLSWQISKSVE* |
Coding | >OphauG2|1762 ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG |
Transcript | >OphauG2|1762 ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG |
Gene | >OphauG2|1762 ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG |