Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1762
Gene name
LocationContig_156:354..879
Strand-
Gene length (bp)525
Transcript length (bp)525
Coding sequence length (bp)525
Protein length (aa) 175

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14856 Hce2 Pathogen effector; putative necrosis-inducing factor 7.3E-13 56 155

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 4 23 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1762
MALFAFYLCLVLFVESTLVAAFPTPTYTMRRRQSCPLPFANATSLWWEPSTDAATTCDEASYADDPKLDAANWRQ
CAALYSSLAGQNGSFHLSHGNNGAAVPLLSQRDCILSVLPLDADKGPYTIGMRDAEAMLGNSLRNYSRGTLLSVK
GLVKCDVAGGGRAGLSWQISKSVE*
Coding >OphauG2|1762
ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG
ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT
ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA
TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC
GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT
GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG
GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG
Transcript >OphauG2|1762
ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG
ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT
ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA
TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC
GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT
GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG
GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG
Gene >OphauG2|1762
ATGGCCCTCTTTGCCTTTTATCTTTGTCTCGTCCTCTTTGTTGAAAGCACCCTCGTCGCTGCTTTTCCAACCCCG
ACCTACACCATGCGCCGTCGCCAGTCTTGTCCTCTTCCGTTTGCCAATGCCACGTCCCTATGGTGGGAGCCTTCT
ACCGACGCCGCCACGACGTGTGATGAGGCTTCCTATGCCGACGACCCTAAGCTAGATGCTGCCAACTGGCGTCAA
TGTGCCGCTCTCTACAGCTCTCTGGCTGGCCAAAACGGCTCCTTTCATCTTTCTCACGGCAATAACGGTGCTGCC
GTTCCTCTACTATCGCAAAGGGACTGCATACTTTCCGTCCTGCCTCTAGACGCCGACAAGGGCCCATATACCATT
GGCATGCGCGATGCCGAGGCCATGCTGGGCAACAGCCTCCGCAACTATTCCCGCGGCACTCTTCTCTCCGTCAAG
GGCCTCGTCAAGTGTGACGTTGCTGGTGGCGGAAGAGCTGGCCTCTCGTGGCAAATCTCCAAGTCTGTCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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