© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1757 |
| Gene name | |
| Location | Contig_1557:824..2135 |
| Strand | + |
| Gene length (bp) | 1311 |
| Transcript length (bp) | 1311 |
| Coding sequence length (bp) | 1311 |
| Protein length (aa) | 437 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 4.9E-12 | 102 | 235 |
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 8.4E-23 | 312 | 420 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTS8|YI7B_SCHPO | UPF0695 membrane protein C977.11/PB8B6.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.11 PE=3 SV=1 | 95 | 432 | 9.0E-35 |
| sp|Q08991|YP279_YEAST | UPF0695 membrane protein YPL279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL279C PE=3 SV=1 | 105 | 435 | 6.0E-27 |
| sp|Q08913|YO390_YEAST | UPF0695 membrane protein YOR390W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR390W PE=3 SV=1 | 105 | 435 | 3.0E-26 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 54 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 88 | 110 | 22 |
| 2 | 125 | 147 | 22 |
| 3 | 183 | 205 | 22 |
| 4 | 235 | 257 | 22 |
| 5 | 278 | 300 | 22 |
| 6 | 305 | 327 | 22 |
| 7 | 340 | 357 | 17 |
| 8 | 372 | 394 | 22 |
| 9 | 401 | 423 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1757 MESTAPSHGAHTRQDTANKANPSATQQRYRMPVRWSSLDEIATSPVQNVADAPIHGHVGLETDWTGHGNNGVAVL DEDAPKDSSQLRLVSAWATQLYTISYLVFFSLLGTLARLGVTALTRYPNAPVIFTTVWANFGGSLIMGFLAEDRA LFRQEWGTPPTQIGPGTSQDEAVKKAHLATKKTIPLYIGLATGFCGSFTSFCTFMRDIFLAMSNDLVAPGLGQSF AVSRNGGFSLMAMLAVMIATLALSLGGLVVGAHLAVASASVMPVIPYQLSRRLVDPLVVFLAWGCWLGAVLLSVF PPHNFWRGRATFALVFAPPGCLLRFHLSQLLNAKVKTFPLGTFAANIFGTALLAMAWDLAHGQMGGVTGCQVLQG IQDGFCGCLTTVSTWVAELNSLQRRNAYVYGAASVGAGFAVTVIIMGGMRWTHGFDSVLCH* |
| Coding | >OphauG2|1757 ATGGAGTCTACGGCGCCCAGCCATGGCGCCCATACTCGACAAGACACAGCCAATAAAGCGAATCCAAGCGCCACT CAGCAACGCTACAGGATGCCGGTCCGCTGGTCCAGTCTCGACGAGATAGCTACGAGCCCCGTGCAAAATGTGGCC GACGCGCCTATCCATGGCCACGTCGGTCTCGAGACGGACTGGACAGGGCATGGAAATAATGGCGTGGCTGTGCTG GACGAGGATGCGCCAAAAGACTCTTCACAGCTGCGCCTCGTCTCGGCTTGGGCGACGCAGCTGTACACGATTTCC TACCTCGTCTTCTTCTCTCTGCTCGGTACTCTGGCCCGACTTGGTGTTACGGCACTGACAAGGTACCCTAATGCG CCCGTTATTTTTACTACCGTATGGGCCAATTTCGGAGGGAGCCTCATCATGGGCTTCTTGGCCGAGGACCGCGCT CTATTCCGCCAGGAATGGGGGACACCACCGACGCAAATAGGACCAGGCACCAGTCAAGACGAGGCGGTCAAAAAG GCCCATTTGGCCACCAAAAAGACCATTCCCCTCTACATTGGCCTTGCGACTGGCTTCTGTGGCAGCTTCACCAGC TTCTGTACCTTTATGCGAGACATCTTCTTGGCCATGTCCAATGACTTGGTAGCGCCTGGCCTTGGACAATCATTC GCAGTGAGCCGCAACGGGGGCTTTTCCTTGATGGCCATGCTGGCCGTCATGATTGCCACTCTTGCTCTCTCCCTG GGCGGCCTCGTGGTGGGAGCCCATCTTGCCGTTGCTTCAGCATCAGTGATGCCCGTCATTCCATACCAACTTAGC CGCCGACTCGTGGATCCCTTGGTCGTCTTTCTCGCCTGGGGATGCTGGTTGGGCGCCGTGTTGCTCTCTGTATTT CCTCCTCATAATTTTTGGCGTGGACGAGCCACCTTTGCCCTCGTATTCGCGCCTCCTGGGTGCCTGCTGCGCTTC CATCTATCACAGCTGCTCAATGCCAAGGTCAAGACGTTTCCCTTGGGAACTTTCGCCGCCAATATATTTGGCACT GCGCTATTGGCCATGGCGTGGGACCTGGCCCACGGGCAGATGGGAGGCGTCACTGGCTGTCAGGTGCTGCAGGGG ATACAGGACGGCTTTTGCGGGTGCTTGACAACAGTGTCGACATGGGTGGCTGAGTTGAATAGCCTGCAGCGGCGC AATGCCTATGTGTACGGAGCGGCCAGTGTTGGCGCTGGGTTTGCTGTCACGGTAATCATCATGGGCGGCATGCGC TGGACTCATGGCTTTGACTCGGTGCTGTGCCATTGA |
| Transcript | >OphauG2|1757 ATGGAGTCTACGGCGCCCAGCCATGGCGCCCATACTCGACAAGACACAGCCAATAAAGCGAATCCAAGCGCCACT CAGCAACGCTACAGGATGCCGGTCCGCTGGTCCAGTCTCGACGAGATAGCTACGAGCCCCGTGCAAAATGTGGCC GACGCGCCTATCCATGGCCACGTCGGTCTCGAGACGGACTGGACAGGGCATGGAAATAATGGCGTGGCTGTGCTG GACGAGGATGCGCCAAAAGACTCTTCACAGCTGCGCCTCGTCTCGGCTTGGGCGACGCAGCTGTACACGATTTCC TACCTCGTCTTCTTCTCTCTGCTCGGTACTCTGGCCCGACTTGGTGTTACGGCACTGACAAGGTACCCTAATGCG CCCGTTATTTTTACTACCGTATGGGCCAATTTCGGAGGGAGCCTCATCATGGGCTTCTTGGCCGAGGACCGCGCT CTATTCCGCCAGGAATGGGGGACACCACCGACGCAAATAGGACCAGGCACCAGTCAAGACGAGGCGGTCAAAAAG GCCCATTTGGCCACCAAAAAGACCATTCCCCTCTACATTGGCCTTGCGACTGGCTTCTGTGGCAGCTTCACCAGC TTCTGTACCTTTATGCGAGACATCTTCTTGGCCATGTCCAATGACTTGGTAGCGCCTGGCCTTGGACAATCATTC GCAGTGAGCCGCAACGGGGGCTTTTCCTTGATGGCCATGCTGGCCGTCATGATTGCCACTCTTGCTCTCTCCCTG GGCGGCCTCGTGGTGGGAGCCCATCTTGCCGTTGCTTCAGCATCAGTGATGCCCGTCATTCCATACCAACTTAGC CGCCGACTCGTGGATCCCTTGGTCGTCTTTCTCGCCTGGGGATGCTGGTTGGGCGCCGTGTTGCTCTCTGTATTT CCTCCTCATAATTTTTGGCGTGGACGAGCCACCTTTGCCCTCGTATTCGCGCCTCCTGGGTGCCTGCTGCGCTTC CATCTATCACAGCTGCTCAATGCCAAGGTCAAGACGTTTCCCTTGGGAACTTTCGCCGCCAATATATTTGGCACT GCGCTATTGGCCATGGCGTGGGACCTGGCCCACGGGCAGATGGGAGGCGTCACTGGCTGTCAGGTGCTGCAGGGG ATACAGGACGGCTTTTGCGGGTGCTTGACAACAGTGTCGACATGGGTGGCTGAGTTGAATAGCCTGCAGCGGCGC AATGCCTATGTGTACGGAGCGGCCAGTGTTGGCGCTGGGTTTGCTGTCACGGTAATCATCATGGGCGGCATGCGC TGGACTCATGGCTTTGACTCGGTGCTGTGCCATTGA |
| Gene | >OphauG2|1757 ATGGAGTCTACGGCGCCCAGCCATGGCGCCCATACTCGACAAGACACAGCCAATAAAGCGAATCCAAGCGCCACT CAGCAACGCTACAGGATGCCGGTCCGCTGGTCCAGTCTCGACGAGATAGCTACGAGCCCCGTGCAAAATGTGGCC GACGCGCCTATCCATGGCCACGTCGGTCTCGAGACGGACTGGACAGGGCATGGAAATAATGGCGTGGCTGTGCTG GACGAGGATGCGCCAAAAGACTCTTCACAGCTGCGCCTCGTCTCGGCTTGGGCGACGCAGCTGTACACGATTTCC TACCTCGTCTTCTTCTCTCTGCTCGGTACTCTGGCCCGACTTGGTGTTACGGCACTGACAAGGTACCCTAATGCG CCCGTTATTTTTACTACCGTATGGGCCAATTTCGGAGGGAGCCTCATCATGGGCTTCTTGGCCGAGGACCGCGCT CTATTCCGCCAGGAATGGGGGACACCACCGACGCAAATAGGACCAGGCACCAGTCAAGACGAGGCGGTCAAAAAG GCCCATTTGGCCACCAAAAAGACCATTCCCCTCTACATTGGCCTTGCGACTGGCTTCTGTGGCAGCTTCACCAGC TTCTGTACCTTTATGCGAGACATCTTCTTGGCCATGTCCAATGACTTGGTAGCGCCTGGCCTTGGACAATCATTC GCAGTGAGCCGCAACGGGGGCTTTTCCTTGATGGCCATGCTGGCCGTCATGATTGCCACTCTTGCTCTCTCCCTG GGCGGCCTCGTGGTGGGAGCCCATCTTGCCGTTGCTTCAGCATCAGTGATGCCCGTCATTCCATACCAACTTAGC CGCCGACTCGTGGATCCCTTGGTCGTCTTTCTCGCCTGGGGATGCTGGTTGGGCGCCGTGTTGCTCTCTGTATTT CCTCCTCATAATTTTTGGCGTGGACGAGCCACCTTTGCCCTCGTATTCGCGCCTCCTGGGTGCCTGCTGCGCTTC CATCTATCACAGCTGCTCAATGCCAAGGTCAAGACGTTTCCCTTGGGAACTTTCGCCGCCAATATATTTGGCACT GCGCTATTGGCCATGGCGTGGGACCTGGCCCACGGGCAGATGGGAGGCGTCACTGGCTGTCAGGTGCTGCAGGGG ATACAGGACGGCTTTTGCGGGTGCTTGACAACAGTGTCGACATGGGTGGCTGAGTTGAATAGCCTGCAGCGGCGC AATGCCTATGTGTACGGAGCGGCCAGTGTTGGCGCTGGGTTTGCTGTCACGGTAATCATCATGGGCGGCATGCGC TGGACTCATGGCTTTGACTCGGTGCTGTGCCATTGA |