© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|1755 |
| Gene name | |
| Location | Contig_1555:2238..2782 |
| Strand | - |
| Gene length (bp) | 544 |
| Transcript length (bp) | 402 |
| Coding sequence length (bp) | 402 |
| Protein length (aa) | 134 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12326 | EOS1 | N-glycosylation protein | 9.8E-09 | 1 | 61 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0034599 | cellular response to oxidative stress | Yes |
| GO:0070887 | cellular response to chemical stimulus | No |
| GO:0042221 | response to chemical | No |
| GO:0031090 | organelle membrane | No |
| GO:0062197 | cellular response to chemical stress | No |
| GO:0006950 | response to stress | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0006979 | response to oxidative stress | No |
| GO:0008150 | biological_process | No |
| GO:0050896 | response to stimulus | No |
| GO:0033554 | cellular response to stress | No |
| GO:0016020 | membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 44 | 63 | 19 |
| 3 | 76 | 98 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|1755 MSRWLINYTPQATLVRLLSINAVNAYLTLSVLSLTGGFQDSRLLLSGWIGIATTLTVCYHITHQKINIRKETSTS INVFSIASYITMVTLLIHMHSTLADYPTMPIVARARLLWRDTASLLANFKGAIERAEL* |
| Coding | >OphauG2|1755 ATGTCGCGCTGGCTTATCAATTATACACCCCAGGCCACTCTGGTCCGCCTTCTTAGTATCAATGCCGTCAACGCA TACCTCACCCTATCCGTTTTGTCCCTTACCGGCGGCTTCCAAGACTCTCGTCTCCTACTGTCGGGATGGATCGGC ATAGCAACCACACTGACCGTCTGCTACCACATTACCCACCAAAAGATCAACATCCGCAAGGAGACTTCCACTTCC ATCAATGTCTTTTCCATTGCCAGCTACATAACCATGGTGACATTGCTTATTCACATGCATTCCACTTTGGCCGAC TATCCCACCATGCCCATTGTCGCCAGGGCACGCCTGCTGTGGCGCGACACGGCTAGCCTGCTGGCTAATTTCAAG GGCGCCATTGAACGTGCTGAGCTGTAA |
| Transcript | >OphauG2|1755 ATGTCGCGCTGGCTTATCAATTATACACCCCAGGCCACTCTGGTCCGCCTTCTTAGTATCAATGCCGTCAACGCA TACCTCACCCTATCCGTTTTGTCCCTTACCGGCGGCTTCCAAGACTCTCGTCTCCTACTGTCGGGATGGATCGGC ATAGCAACCACACTGACCGTCTGCTACCACATTACCCACCAAAAGATCAACATCCGCAAGGAGACTTCCACTTCC ATCAATGTCTTTTCCATTGCCAGCTACATAACCATGGTGACATTGCTTATTCACATGCATTCCACTTTGGCCGAC TATCCCACCATGCCCATTGTCGCCAGGGCACGCCTGCTGTGGCGCGACACGGCTAGCCTGCTGGCTAATTTCAAG GGCGCCATTGAACGTGCTGAGCTGTAA |
| Gene | >OphauG2|1755 ATGTCGCGCTGGTGGGTCCACTCCCAGCCTCGCAACCTTTGGCCTTGCTCCCACCCTTGCTTGCCCTTGATATTC TGACTGTTTGCCACAGGCTTATCAATTATACACCCCAGGCCACTCTGGTCCGCCTTCTTAGTATCAATGCCGTCA ACGCATACCTCACCCTATCCGTTTTGTCCCTTACCGGCGGCTTCCAAGACTCTCGTCTCCTACTGTCGGGATGGA TCGGCATAGCAACCGTGTGTCTGTCTATTTGTCCAAATCTGCCGCCGAGGGCCCTCTGCTGAAACATCGCTGCCA GACACTGACCGTCTGCTACCACATTACCCACCAAAAGATCAACATCCGCAAGGAGACTTCCACTTCCATCAATGT CTTTTCCATTGCCAGCTACATAACCATGGTGACATTGCTTATTCACATGCATTCCACTTTGGCCGACTATCCCAC CATGCCCATTGTCGCCAGGGCACGCCTGCTGTGGCGCGACACGGCTAGCCTGCTGGCTAATTTCAAGGGCGCCAT TGAACGTGCTGAGCTGTAA |