Protein ID | OphauG2|1722 |
Gene name | |
Location | Contig_1542:1744..3274 |
Strand | + |
Gene length (bp) | 1530 |
Transcript length (bp) | 1149 |
Coding sequence length (bp) | 1149 |
Protein length (aa) | 383 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 4.8E-08 | 35 | 69 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q1MTM9|YFN1_SCHPO | Uncharacterized transcriptional regulatory protein C1327.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1327.01c PE=1 SV=2 | 29 | 156 | 5.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008270 | zinc ion binding | Yes |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0050794 | regulation of cellular process | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0019222 | regulation of metabolic process | No |
GO:0043167 | ion binding | No |
GO:0046872 | metal ion binding | No |
GO:0050789 | regulation of biological process | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0010468 | regulation of gene expression | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0008150 | biological_process | No |
GO:0140110 | transcription regulator activity | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0065007 | biological regulation | No |
GO:0005488 | binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0003700 | DNA-binding transcription factor activity | No |
GO:0043169 | cation binding | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|1722 MNRPWQPILPAPGNPNKPALPERVPRTPRYTRPNACLACRVKKIRCDGQKPNCSPCAKRSAVCAYKASRAERRSE QDIHEIIHQLKTAPPMEALELLQRLRASRDPGQAASAMNGRAHGYHCPSAVQAARAVSPPSFCSFEFELMAKHPF AYPALLHVDVTAMSLMPLHTLHVHGCPNQTTALKGTLAGQLAIHCTGPDQAVSSCLAPSQSPAGPEHLSLLQSGH RQLELCHDGLHGLCIRYWTGVAISDSLAASIISNYLQVMHPILGFFDADLFLQDLLSYRQSFCSPFLVEALLSLA CQCHCTMSEDIEVIVKSCLQSAEAMWHSERLCDSVTNLAAMMLLSASSHLQMSQVSMADILQDIALMAKRMNLLD RGEPTIG* |
Coding | >OphauG2|1722 ATGAATCGCCCTTGGCAGCCCATTCTACCGGCTCCTGGAAACCCCAACAAGCCTGCGCTGCCCGAGAGAGTGCCT CGAACGCCTCGCTATACCCGCCCCAATGCCTGTTTAGCGTGTCGCGTCAAGAAGATTCGTTGCGATGGCCAAAAA CCAAACTGCAGCCCATGTGCCAAGCGGTCGGCCGTGTGCGCCTACAAAGCCAGTCGAGCGGAGCGTCGAAGCGAA CAAGACATCCACGAGATTATCCACCAGCTGAAAACCGCCCCACCAATGGAGGCCTTGGAGCTGCTGCAGCGCCTG CGAGCCAGTAGGGATCCGGGCCAAGCAGCATCTGCCATGAATGGGAGGGCCCACGGATACCACTGTCCATCGGCG GTGCAGGCGGCTCGAGCCGTTTCGCCCCCGTCCTTTTGCAGCTTCGAGTTTGAGTTGATGGCCAAGCACCCGTTT GCATATCCGGCCCTGCTGCATGTCGATGTCACCGCCATGAGTCTCATGCCGCTTCACACGCTCCATGTACATGGC TGTCCGAATCAGACGACTGCTCTCAAAGGTACTCTTGCAGGCCAACTGGCTATTCATTGCACGGGCCCTGACCAA GCAGTCAGCAGCTGTCTTGCCCCCTCCCAGAGTCCAGCTGGCCCTGAGCACCTGTCCTTGCTGCAGTCTGGGCAT CGTCAGCTTGAGCTGTGCCATGATGGCTTGCACGGGTTATGTATCCGGTACTGGACTGGCGTGGCCATTTCGGAC AGTCTGGCGGCCAGCATCATCTCAAACTACCTCCAAGTGATGCATCCAATCCTGGGCTTTTTTGATGCAGATTTG TTTCTGCAAGACCTGCTCAGCTATAGGCAGAGCTTCTGCTCGCCCTTTTTGGTGGAAGCGCTTCTCTCGCTTGCC TGCCAATGTCACTGCACCATGAGCGAGGATATAGAGGTGATTGTCAAATCATGTCTGCAGAGTGCCGAGGCAATG TGGCATTCGGAGCGACTGTGTGACTCGGTCACAAACCTGGCCGCCATGATGCTTCTGAGTGCCAGCAGCCACCTC CAAATGTCTCAAGTGTCCATGGCGGATATCCTGCAAGATATTGCCCTCATGGCAAAACGCATGAACCTGCTCGAC CGTGGGGAGCCTACAATTGGTTAA |
Transcript | >OphauG2|1722 ATGAATCGCCCTTGGCAGCCCATTCTACCGGCTCCTGGAAACCCCAACAAGCCTGCGCTGCCCGAGAGAGTGCCT CGAACGCCTCGCTATACCCGCCCCAATGCCTGTTTAGCGTGTCGCGTCAAGAAGATTCGTTGCGATGGCCAAAAA CCAAACTGCAGCCCATGTGCCAAGCGGTCGGCCGTGTGCGCCTACAAAGCCAGTCGAGCGGAGCGTCGAAGCGAA CAAGACATCCACGAGATTATCCACCAGCTGAAAACCGCCCCACCAATGGAGGCCTTGGAGCTGCTGCAGCGCCTG CGAGCCAGTAGGGATCCGGGCCAAGCAGCATCTGCCATGAATGGGAGGGCCCACGGATACCACTGTCCATCGGCG GTGCAGGCGGCTCGAGCCGTTTCGCCCCCGTCCTTTTGCAGCTTCGAGTTTGAGTTGATGGCCAAGCACCCGTTT GCATATCCGGCCCTGCTGCATGTCGATGTCACCGCCATGAGTCTCATGCCGCTTCACACGCTCCATGTACATGGC TGTCCGAATCAGACGACTGCTCTCAAAGGTACTCTTGCAGGCCAACTGGCTATTCATTGCACGGGCCCTGACCAA GCAGTCAGCAGCTGTCTTGCCCCCTCCCAGAGTCCAGCTGGCCCTGAGCACCTGTCCTTGCTGCAGTCTGGGCAT CGTCAGCTTGAGCTGTGCCATGATGGCTTGCACGGGTTATGTATCCGGTACTGGACTGGCGTGGCCATTTCGGAC AGTCTGGCGGCCAGCATCATCTCAAACTACCTCCAAGTGATGCATCCAATCCTGGGCTTTTTTGATGCAGATTTG TTTCTGCAAGACCTGCTCAGCTATAGGCAGAGCTTCTGCTCGCCCTTTTTGGTGGAAGCGCTTCTCTCGCTTGCC TGCCAATGTCACTGCACCATGAGCGAGGATATAGAGGTGATTGTCAAATCATGTCTGCAGAGTGCCGAGGCAATG TGGCATTCGGAGCGACTGTGTGACTCGGTCACAAACCTGGCCGCCATGATGCTTCTGAGTGCCAGCAGCCACCTC CAAATGTCTCAAGTGTCCATGGCGGATATCCTGCAAGATATTGCCCTCATGGCAAAACGCATGAACCTGCTCGAC CGTGGGGAGCCTACAATTGGTTAA |
Gene | >OphauG2|1722 ATGAATCGCCCTTGGCAGCCCATTCTACCGGCTCCTGGAAACCCCAACAAGCCTGCGCTGCCCGAGAGAGTGCCT CGAACGCCTCGCTATACCCGCCCCAATGCCTGTTTAGCGTGTCGCGTCAAGAAGATTCGTGTCAGTCACATGTCT TTTTTTTTTTTTCCTTTCTTTTTCTTTTTCTTTTTTTGGCCTTGCTCCTTTTGCCTCGTCCATCCTTGGCCTCTC GCATCTCCTCTCTTTAATAACAGCTTTACTCTCTCTGGCCGTGTCTCTGCCTCTCATGCATTTTTCAACTACTCT TCTCATCCACTTCCTATCCATACTCCTCTTGGGCTTGTGAGTCGAGGCTCACGTCTCCTAGTGCGATGGCCAAAA ACCAAACTGCAGCCCATGTGCCAAGCGGTCGGCCGTGTGCGCCTACAAAGCCAGTCGAGCGGAGCGTCGAAGCGA ACAAGACATCCACGAGATTATCCACCAGCTGAAAACCGCCCCACCAATGGAGGCCTTGGAGCTGCTGCAGCGCCT GCGAGCCAGTAGGGATCCGGGCCAAGCAGCATCTGCCATGAATGGGAGGGCCCACGGATACCACTGTCCATCGGC GGTGCAGGCGGCTCGAGCCGTTTCGCCCCCGTCCTTTTGCAGCTTCGAGTTTGAGTTGATGGCCAAGCACCCGTT TGCATATCCGGCCCTGCTGCATGTCGATGTCACCGCCATGAGTCTCATGCCGCTTCACACGCTCCATGTACATGG CTGTCCGAATCAGACGACTGCTCTCAAAGGTACTCTTGCAGGCCAACTGGCTATTCATTGCACGGGCCCTGACCA AGCAGTCAGCAGCTGTCTTGCCCCCTCCCAGAGTCCAGCTGGCCCTGAGCACCTGTCCTTGCTGCAGTCTGGGCA TCGTCAGCTTGAGCTGTGCCATGATGGCTTGCACGGGTTATGTATCCGGTACTGGACTGGCGTGGCCATTTCGGA CAGTCTGGCGGCCAGCATCATCTCAAACTACCTCCAAGTGATGCATCCAATCCTGGGCTTTTTTGATGCAGATTT GTTTCTGCAAGACCTGCTCAGCTATAGGCAGAGCTTCTGCTCGCCCTTTTTGGTGGAAGCGCTTCTCTCGCTTGC CTGCGTGAGTGGATGAATCTCTAGCCCATATTCACTCGGCTCCATGATTTTTACCAAGGCTCTAACGCCCCGTTT GGATTTAGCAATGTCACTGCACCATGAGCGAGGATATAGAGGTGATTGTCAAATCATGTCTGCAGAGTGCCGAGG CAATGTGGCATTCGGAGCGACTGTGTGACTCGGTCACAAACCTGGCCGCCATGATGCTTCTGAGTGCCAGCAGCC ACCTCCAAATGTCTCAAGTGTCCATGGCGGATATCCTGCAAGATATTGCCCTCATGGCAAAACGCATGAACCTGC TCGACGTACGCTTCACCGAGCCCATGGCAGCCCGCCTGAGAAATCTATCTCCAGAGTCCAAGCTGGCTACAGCTC ATGCAGCGTGGGGAGCCTACAATTGGTTAA |