Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|1716
Gene name
LocationContig_154:19821..20844
Strand+
Gene length (bp)1023
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|B9WCP3|IRC22_CANDC Increased recombination centers protein 22 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=IRC22 PE=3 SV=1 27 261 1.0E-15
sp|C5M501|IR222_CANTT Increased recombination centers protein 22-2 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-2 PE=3 SV=1 56 255 2.0E-14
sp|Q59YF4|IR221_CANAL Increased recombination centers protein 22-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-1 PE=3 SV=1 27 262 5.0E-14
sp|P0CH79|IR222_CANAW Increased recombination centers protein 22-2 OS=Candida albicans (strain WO-1) GN=IRC22-2 PE=3 SV=1 27 262 1.0E-13
sp|Q59XW9|IR222_CANAL Increased recombination centers protein 22-2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-2 PE=3 SV=1 27 262 6.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|B9WCP3|IRC22_CANDC Increased recombination centers protein 22 OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=IRC22 PE=3 SV=1 27 261 1.0E-15
sp|C5M501|IR222_CANTT Increased recombination centers protein 22-2 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-2 PE=3 SV=1 56 255 2.0E-14
sp|Q59YF4|IR221_CANAL Increased recombination centers protein 22-1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-1 PE=3 SV=1 27 262 5.0E-14
sp|P0CH79|IR222_CANAW Increased recombination centers protein 22-2 OS=Candida albicans (strain WO-1) GN=IRC22-2 PE=3 SV=1 27 262 1.0E-13
sp|Q59XW9|IR222_CANAL Increased recombination centers protein 22-2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRC22-2 PE=3 SV=1 27 262 6.0E-13
sp|C4YKP5|IR221_CANAW Increased recombination centers protein 22-1 OS=Candida albicans (strain WO-1) GN=IRC22-1 PE=3 SV=1 27 262 3.0E-12
sp|A5DYV2|IRC22_LODEL Increased recombination centers protein 22 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=IRC22 PE=3 SV=1 48 261 6.0E-10
sp|A3LU17|IRC22_PICST Increased recombination centers protein 22 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=IRC22 PE=3 SV=1 59 260 4.0E-08
sp|Q6BW93|IRC22_DEBHA Increased recombination centers protein 22 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=IRC22 PE=3 SV=1 57 260 7.0E-08
sp|C5M580|IR221_CANTT Increased recombination centers protein 22-1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=IRC22-1 PE=3 SV=1 56 259 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 171 190 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|1716
MNLSCLIALLAMPVWGVAAQADAEPDAASAESSSSKPLSRATITTAFGEGSELGVNLVNGRPTRALLTVTNTDAT
GPITLGFVGGTLAAPRDTDGGGAIVRNLTATQYGLVVDAGQTRTATYSFALDMQPQEVRLRLVAVVSHAGGMYEV
EAHSGLATIVEAPTDYTDPQILFLYLLLCALSAGIVYFAYKTWIETLFPLRRPAPARRSRRSLDTDAASSSSGPA
RGGAADPADATSSGAKTYDESWIPQHHIQRPVAKRVKSGAASGSPAAPRRRGVE*
Coding >OphauG2|1716
ATGAATCTGTCGTGTCTCATTGCCCTGCTGGCAATGCCAGTTTGGGGCGTTGCCGCGCAAGCCGACGCTGAACCC
GACGCCGCAAGCGCCGAGAGCAGCAGCAGCAAGCCATTGTCCCGCGCAACCATCACCACGGCATTCGGCGAGGGC
AGCGAGCTGGGCGTCAACCTGGTCAATGGGCGGCCGACGCGAGCGCTACTAACCGTGACCAACACGGACGCCACG
GGGCCGATTACGCTTGGCTTTGTGGGCGGGACGCTGGCAGCGCCGCGGGACACGGACGGCGGCGGCGCCATTGTG
CGCAACCTGACGGCAACGCAGTACGGGCTCGTGGTGGACGCGGGCCAGACGCGCACCGCCACGTACTCGTTTGCC
CTGGACATGCAGCCGCAAGAGGTGCGCCTGCGCCTGGTGGCGGTGGTGTCGCACGCGGGGGGCATGTATGAGGTC
GAGGCGCATTCGGGGCTGGCGACAATTGTCGAGGCGCCGACGGATTACACTGATCCGCAAATCCTCTTTCTATAC
CTCCTCCTCTGCGCCCTCTCAGCGGGCATCGTCTACTTTGCCTACAAGACATGGATCGAGACGCTCTTCCCTCTC
CGCCGCCCCGCCCCTGCACGCCGCTCCCGCCGCTCCCTCGACACCGATGCTGCTTCGTCGTCGTCGGGGCCTGCT
CGCGGCGGCGCCGCTGACCCTGCCGACGCCACGTCCTCGGGCGCAAAGACGTACGACGAGAGCTGGATCCCCCAG
CACCATATCCAGCGGCCCGTGGCAAAGCGCGTCAAGTCGGGCGCCGCCTCGGGCTCCCCGGCCGCACCCAGACGA
AGAGGCGTTGAGTAG
Transcript >OphauG2|1716
ATGAATCTGTCGTGTCTCATTGCCCTGCTGGCAATGCCAGTTTGGGGCGTTGCCGCGCAAGCCGACGCTGAACCC
GACGCCGCAAGCGCCGAGAGCAGCAGCAGCAAGCCATTGTCCCGCGCAACCATCACCACGGCATTCGGCGAGGGC
AGCGAGCTGGGCGTCAACCTGGTCAATGGGCGGCCGACGCGAGCGCTACTAACCGTGACCAACACGGACGCCACG
GGGCCGATTACGCTTGGCTTTGTGGGCGGGACGCTGGCAGCGCCGCGGGACACGGACGGCGGCGGCGCCATTGTG
CGCAACCTGACGGCAACGCAGTACGGGCTCGTGGTGGACGCGGGCCAGACGCGCACCGCCACGTACTCGTTTGCC
CTGGACATGCAGCCGCAAGAGGTGCGCCTGCGCCTGGTGGCGGTGGTGTCGCACGCGGGGGGCATGTATGAGGTC
GAGGCGCATTCGGGGCTGGCGACAATTGTCGAGGCGCCGACGGATTACACTGATCCGCAAATCCTCTTTCTATAC
CTCCTCCTCTGCGCCCTCTCAGCGGGCATCGTCTACTTTGCCTACAAGACATGGATCGAGACGCTCTTCCCTCTC
CGCCGCCCCGCCCCTGCACGCCGCTCCCGCCGCTCCCTCGACACCGATGCTGCTTCGTCGTCGTCGGGGCCTGCT
CGCGGCGGCGCCGCTGACCCTGCCGACGCCACGTCCTCGGGCGCAAAGACGTACGACGAGAGCTGGATCCCCCAG
CACCATATCCAGCGGCCCGTGGCAAAGCGCGTCAAGTCGGGCGCCGCCTCGGGCTCCCCGGCCGCACCCAGACGA
AGAGGCGTTGAGTAG
Gene >OphauG2|1716
ATGAATCTGTCGTGTCTCATTGCCCTGCTGGCAATGCCAGTTTGGGGCGTTGCCGCGCAAGTAAGAAGCAGCCAA
ACCCCCCCCTCGCCTCACGACCAAGCCGAAAACCCCAAACTAACGCTCTCTGCTCTCTCCAGGCCGACGCTGAAC
CCGACGCCGCAAGCGCCGAGAGCAGCAGCAGCAAGCCATTGTCCCGCGCAACCATCACCACGGCATTCGGCGAGG
GCAGCGAGCTGGGCGTCAACCTGGTCAATGGGCGGCCGACGCGAGCGCTACTAACCGTGACCAACACGGACGCCA
CGGGGCCGATTACGCTTGGCTTTGTGGGCGGGACGCTGGCAGCGCCGCGGGACACGGACGGCGGCGGCGCCATTG
TGCGCAACCTGACGGCAACGCAGTACGGGCTCGTGGTGGACGCGGGCCAGACGCGCACCGCCACGTACTCGTTTG
CCCTGGACATGCAGCCGCAAGAGGTGCGCCTGCGCCTGGTGGCGGTGGTGTCGCACGCGGGGGGCATGTATGAGG
TCGAGGCGCATTCGGGGCTGGCGACAATTGTCGAGGCGCCGACGGATTACACTGATCCGCAAATGTATGGCCCTT
GATGACAATAACCCCCCCTTTTTTTTCTCCCCTGGCCAAGTATGGAGGGGAAAAAAAAAAGACACGGCTCTGGGC
TAACGAGACGATTTGACCAGCCTCTTTCTATACCTCCTCCTCTGCGCCCTCTCAGCGGGCATCGTCTACTTTGCC
TACAAGACATGGATCGAGACGCTCTTCCCTCTCCGCCGCCCCGCCCCTGCACGCCGCTCCCGCCGCTCCCTCGAC
ACCGATGCTGCTTCGTCGTCGTCGGGGCCTGCTCGCGGCGGCGCCGCTGACCCTGCCGACGCCACGTCCTCGGGC
GCAAAGACGTACGACGAGAGCTGGATCCCCCAGCACCATATCCAGCGGCCCGTGGCAAAGCGCGTCAAGTCGGGC
GCCGCCTCGGGCTCCCCGGCCGCACCCAGACGAAGAGGCGTTGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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